RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
SCN1B-208ENST00000640135 MORC1Q86VD1 984 aa14.35□□□□□ -0.11
SCN1B-208ENST00000640135 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCN1B-208ENST00000640135 NPHP1O15259 732 aa14.35□□□□□ -0.11
SCN1B-208ENST00000640135 MIER1Q8N108 512 aa14.35□□□□□ -0.11
SCN1B-208ENST00000640135 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
SCN1B-208ENST00000640135 STK26Q9P289 416 aa14.32□□□□□ -0.12
SCN1B-208ENST00000640135 CASC1Q6TDU7 716 aa14.32□□□□□ -0.12
SCN1B-208ENST00000640135 LAS1LQ9Y4W2 734 aaKnown RBP14.31□□□□□ -0.12
SCN1B-208ENST00000640135 NEUROD2Q15784 382 aa14.31□□□□□ -0.12
SCN1B-208ENST00000640135 TNNT2P45379 298 aaPredicted RBP14.3□□□□□ -0.12
SCN1B-208ENST00000640135 CC2D1BQ5T0F9 858 aaKnown RBP14.3□□□□□ -0.12
SCN1B-208ENST00000640135 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
SCN1B-208ENST00000640135 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
SCN1B-208ENST00000640135 CALD1Q05682 793 aaKnown RBP14.29□□□□□ -0.12
SCN1B-208ENST00000640135 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCN1B-208ENST00000640135 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
SCN1B-208ENST00000640135 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
SCN1B-208ENST00000640135 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
SCN1B-208ENST00000640135 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
SCN1B-208ENST00000640135 NESP48681 1621 aa14.26□□□□□ -0.13
SCN1B-208ENST00000640135 IGF1RP08069 1367 aa14.26□□□□□ -0.13
SCN1B-208ENST00000640135 BECN1Q14457 450 aa14.26□□□□□ -0.13
SCN1B-208ENST00000640135 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
SCN1B-208ENST00000640135 KTN1Q86UP2 1357 aaKnown RBP14.25□□□□□ -0.13
SCN1B-208ENST00000640135 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
SCN1B-208ENST00000640135 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
SCN1B-208ENST00000640135 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
SCN1B-208ENST00000640135 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
SCN1B-208ENST00000640135 UNC13AQ9UPW8 1703 aa14.23□□□□□ -0.13
SCN1B-208ENST00000640135 GRIN2BQ13224 1484 aa14.23□□□□□ -0.13
SCN1B-208ENST00000640135 SOX12O15370 315 aa14.22□□□□□ -0.13
SCN1B-208ENST00000640135 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
SCN1B-208ENST00000640135 RALBP1Q15311 655 aa14.22□□□□□ -0.13
SCN1B-208ENST00000640135 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
SCN1B-208ENST00000640135 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
SCN1B-208ENST00000640135 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
SCN1B-208ENST00000640135 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
SCN1B-208ENST00000640135 OS9Q13438 667 aaPredicted RBP14.2□□□□□ -0.14
SCN1B-208ENST00000640135 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
SCN1B-208ENST00000640135 NCLP19338 710 aaKnown RBP14.2□□□□□ -0.14
SCN1B-208ENST00000640135 GOLGA2Q08379 1002 aa14.2□□□□□ -0.14
SCN1B-208ENST00000640135 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
SCN1B-208ENST00000640135 FOXD1Q16676 465 aa14.19□□□□□ -0.14
SCN1B-208ENST00000640135 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
SCN1B-208ENST00000640135 RAD54L2Q9Y4B4 1467 aa14.18□□□□□ -0.14
SCN1B-208ENST00000640135 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
SCN1B-208ENST00000640135 IPO8O15397 1037 aaKnown RBP14.18□□□□□ -0.14
SCN1B-208ENST00000640135 FRAT1Q92837 279 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-208ENST00000640135 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
SCN1B-208ENST00000640135 ANP32EQ9BTT0 268 aa14.17□□□□□ -0.14
SCN1B-208ENST00000640135 CDK11BP21127 795 aaKnown RBP14.17□□□□□ -0.14
SCN1B-208ENST00000640135 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
SCN1B-208ENST00000640135 GOLGA6L22H0YM25 854 aa14.17□□□□□ -0.14
SCN1B-208ENST00000640135 MYOM3Q5VTT5 1437 aa14.16□□□□□ -0.14
SCN1B-208ENST00000640135 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
SCN1B-208ENST00000640135 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
SCN1B-208ENST00000640135 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.15
SCN1B-208ENST00000640135 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.15
SCN1B-208ENST00000640135 L3MBTL2Q969R5 705 aa14.13□□□□□ -0.15
SCN1B-208ENST00000640135 IRX6P78412 446 aaPredicted RBP14.13□□□□□ -0.15
SCN1B-208ENST00000640135 LMOD3Q0VAK6 560 aa14.13□□□□□ -0.15
SCN1B-208ENST00000640135 CCDC9Q9Y3X0 531 aaKnown RBP14.12□□□□□ -0.15
SCN1B-208ENST00000640135 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
SCN1B-208ENST00000640135 AMPHP49418 695 aa14.1□□□□□ -0.15
SCN1B-208ENST00000640135 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
SCN1B-208ENST00000640135 ZRSR1Q15695 479 aaKnown RBP14.09□□□□□ -0.15
SCN1B-208ENST00000640135 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
SCN1B-208ENST00000640135 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-208ENST00000640135 SUPT16HQ9Y5B9 1047 aaKnown RBP14.09□□□□□ -0.15
SCN1B-208ENST00000640135 EVC2Q86UK5 1308 aa14.09□□□□□ -0.15
SCN1B-208ENST00000640135 STK31Q9BXU1 1019 aa14.08□□□□□ -0.16
SCN1B-208ENST00000640135 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
SCN1B-208ENST00000640135 TRAK1Q9UPV9 953 aa14.07□□□□□ -0.16
SCN1B-208ENST00000640135 KCNJ4P48050 445 aa14.07□□□□□ -0.16
SCN1B-208ENST00000640135 CUX1P39880 1505 aa14.07□□□□□ -0.16
SCN1B-208ENST00000640135 FGD1P98174 961 aa14.07□□□□□ -0.16
SCN1B-208ENST00000640135 PHLDB1Q86UU1 1377 aa14.07□□□□□ -0.16
SCN1B-208ENST00000640135 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
SCN1B-208ENST00000640135 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
SCN1B-208ENST00000640135 NLRP13Q86W25 1043 aa14.06□□□□□ -0.16
SCN1B-208ENST00000640135 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
SCN1B-208ENST00000640135 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
SCN1B-208ENST00000640135 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
SCN1B-208ENST00000640135 MCCP23508 829 aa14.03□□□□□ -0.16
SCN1B-208ENST00000640135 COG3Q96JB2 828 aa14.03□□□□□ -0.16
SCN1B-208ENST00000640135 CASKIN1Q8WXD9 1431 aa14.02□□□□□ -0.17
SCN1B-208ENST00000640135 CGNL1Q0VF96 1302 aa14.02□□□□□ -0.17
SCN1B-208ENST00000640135 SENP3-EIF4A1A0A087X0R7 540 aa14□□□□□ -0.17
SCN1B-208ENST00000640135 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
SCN1B-208ENST00000640135 PDE3BQ13370 1112 aa13.99□□□□□ -0.17
SCN1B-208ENST00000640135 FYCO1Q9BQS8 1478 aa13.99□□□□□ -0.17
SCN1B-208ENST00000640135 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
SCN1B-208ENST00000640135 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
SCN1B-208ENST00000640135 RGS3P49796 1198 aa13.98□□□□□ -0.17
SCN1B-208ENST00000640135 ZNF330Q9Y3S2 320 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-208ENST00000640135 DHX57Q6P158 1386 aaKnown RBP13.98□□□□□ -0.17
SCN1B-208ENST00000640135 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
SCN1B-208ENST00000640135 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
SCN1B-208ENST00000640135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms