RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
CROCCP2-206ENST00000639594 TRIM52Q96A61 297 aa26.92■■□□□ 1.9
CROCCP2-206ENST00000639594 KCNH8Q96L42 1107 aa26.92■■□□□ 1.9
CROCCP2-206ENST00000639594 DNMT1P26358 1616 aaKnown RBP26.92■■□□□ 1.9
CROCCP2-206ENST00000639594 DAPK1P53355 1430 aa26.91■■□□□ 1.9
CROCCP2-206ENST00000639594 CDK11AQ9UQ88 783 aaPredicted RBP26.88■■□□□ 1.89
CROCCP2-206ENST00000639594 ABCA8O94911 1581 aa26.88■■□□□ 1.89
CROCCP2-206ENST00000639594 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
CROCCP2-206ENST00000639594 ABCC5O15440 1437 aa26.86■■□□□ 1.89
CROCCP2-206ENST00000639594 PTPRGP23470 1445 aa26.84■■□□□ 1.89
CROCCP2-206ENST00000639594 MPHOSPH9Q99550 1183 aa26.84■■□□□ 1.89
CROCCP2-206ENST00000639594 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
CROCCP2-206ENST00000639594 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
CROCCP2-206ENST00000639594 ITSN2Q9NZM3 1697 aa26.81■■□□□ 1.88
CROCCP2-206ENST00000639594 ADCY10Q96PN6 1610 aa26.8■■□□□ 1.88
CROCCP2-206ENST00000639594 KIF14Q15058 1648 aa26.79■■□□□ 1.88
CROCCP2-206ENST00000639594 CAMSAP2Q08AD1 1489 aa26.75■■□□□ 1.87
CROCCP2-206ENST00000639594 FOXD1Q16676 465 aa26.75■■□□□ 1.87
CROCCP2-206ENST00000639594 GPATCH8Q9UKJ3 1502 aaKnown RBP26.73■■□□□ 1.87
CROCCP2-206ENST00000639594 ATP10BO94823 1461 aa26.72■■□□□ 1.87
CROCCP2-206ENST00000639594 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
CROCCP2-206ENST00000639594 CFDP1Q9UEE9 299 aaPredicted RBP26.71■■□□□ 1.87
CROCCP2-206ENST00000639594 CROCC2H7BZ55 1655 aa26.69■■□□□ 1.86
CROCCP2-206ENST00000639594 ANP32CO43423 234 aa26.69■■□□□ 1.86
CROCCP2-206ENST00000639594 ANKRD30BQ9BXX2 1392 aa26.67■■□□□ 1.86
CROCCP2-206ENST00000639594 CCER2I3L3R5 266 aa26.66■■□□□ 1.86
CROCCP2-206ENST00000639594 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
CROCCP2-206ENST00000639594 OSCARQ8IYS5 282 aa26.65■■□□□ 1.86
CROCCP2-206ENST00000639594 L3MBTL2Q969R5 705 aa26.65■■□□□ 1.86
CROCCP2-206ENST00000639594 ZNF777Q9ULD5 760 aaPredicted RBP26.64■■□□□ 1.85
CROCCP2-206ENST00000639594 HSPA5P11021 654 aaKnown RBP26.63■■□□□ 1.85
CROCCP2-206ENST00000639594 NCOA1Q15788 1441 aa26.62■■□□□ 1.85
CROCCP2-206ENST00000639594 RPRD2Q5VT52 1461 aaKnown RBP26.62■■□□□ 1.85
CROCCP2-206ENST00000639594 SUPT16HQ9Y5B9 1047 aaKnown RBP26.61■■□□□ 1.85
CROCCP2-206ENST00000639594 ABCC2Q92887 1545 aa26.61■■□□□ 1.85
CROCCP2-206ENST00000639594 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
CROCCP2-206ENST00000639594 ADGRL2O95490 1459 aa26.59■■□□□ 1.85
CROCCP2-206ENST00000639594 PZPP20742 1482 aa26.59■■□□□ 1.85
CROCCP2-206ENST00000639594 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.85
CROCCP2-206ENST00000639594 ABCC10Q5T3U5 1492 aa26.57■■□□□ 1.84
CROCCP2-206ENST00000639594 TEX14Q8IWB6 1497 aa26.56■■□□□ 1.84
CROCCP2-206ENST00000639594 EIF4G2P78344 907 aaKnown RBP eCLIP26.56■■□□□ 1.84
CROCCP2-206ENST00000639594 WASHC2AQ641Q2 1341 aa26.55■■□□□ 1.84
CROCCP2-206ENST00000639594 NBPF8Q3BBV2 869 aa26.51■■□□□ 1.84
CROCCP2-206ENST00000639594 ANKRD30AQ9BXX3 1397 aa26.5■■□□□ 1.83
CROCCP2-206ENST00000639594 ZCCHC11Q5TAX3 1644 aaKnown RBP26.49■■□□□ 1.83
CROCCP2-206ENST00000639594 UHRF1BP1LA0JNW5 1464 aa26.49■■□□□ 1.83
CROCCP2-206ENST00000639594 SHANK2Q9UPX8 1470 aa26.44■■□□□ 1.82
CROCCP2-206ENST00000639594 ANKRD50Q9ULJ7 1429 aa26.44■■□□□ 1.82
CROCCP2-206ENST00000639594 KIAA1107Q9UPP5 1409 aa26.44■■□□□ 1.82
CROCCP2-206ENST00000639594 C9orf84Q5VXU9 1444 aa26.42■■□□□ 1.82
CROCCP2-206ENST00000639594 C11orf95C9JLR9 678 aaPredicted RBP26.42■■□□□ 1.82
CROCCP2-206ENST00000639594 POLR1AO95602 1720 aaPredicted RBP26.41■■□□□ 1.82
CROCCP2-206ENST00000639594 CDC42BPBQ9Y5S2 1711 aa26.41■■□□□ 1.82
CROCCP2-206ENST00000639594 PKD2Q13563 968 aa26.39■■□□□ 1.82
CROCCP2-206ENST00000639594 CNTLNQ9NXG0 1405 aa26.39■■□□□ 1.81
CROCCP2-206ENST00000639594 CCDC7Q96M83 1385 aa26.38■■□□□ 1.81
CROCCP2-206ENST00000639594 ARHGEF5Q12774 1597 aa26.37■■□□□ 1.81
CROCCP2-206ENST00000639594 SPATA31E1Q6ZUB1 1445 aa26.36■■□□□ 1.81
CROCCP2-206ENST00000639594 MBD5Q9P267 1494 aa26.36■■□□□ 1.81
CROCCP2-206ENST00000639594 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
CROCCP2-206ENST00000639594 PREX2Q70Z35 1606 aa26.36■■□□□ 1.81
CROCCP2-206ENST00000639594 TTC37Q6PGP7 1564 aa26.35■■□□□ 1.81
CROCCP2-206ENST00000639594 SAMD9LQ8IVG5 1584 aa26.34■■□□□ 1.81
CROCCP2-206ENST00000639594 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
CROCCP2-206ENST00000639594 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
CROCCP2-206ENST00000639594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.33■■□□□ 1.811e-9■■□□□ 11.8
CROCCP2-206ENST00000639594 NUP155O75694 1391 aa26.31■■□□□ 1.8
CROCCP2-206ENST00000639594 KDM5DQ9BY66 1539 aa26.3■■□□□ 1.8
CROCCP2-206ENST00000639594 KIF15Q9NS87 1388 aa26.28■■□□□ 1.8
CROCCP2-206ENST00000639594 FKBP8Q14318 412 aa26.27■■□□□ 1.8
CROCCP2-206ENST00000639594 KIF7Q2M1P5 1343 aa26.26■■□□□ 1.79
CROCCP2-206ENST00000639594 CCDC141Q6ZP82 1450 aa26.25■■□□□ 1.79
CROCCP2-206ENST00000639594 MYO5CQ9NQX4 1742 aa26.24■■□□□ 1.79
CROCCP2-206ENST00000639594 ZNF326Q5BKZ1 582 aaKnown RBP26.22■■□□□ 1.79
CROCCP2-206ENST00000639594 BCORL1Q5H9F3 1711 aa26.22■■□□□ 1.79
CROCCP2-206ENST00000639594 HNRNPUQ00839 825 aaKnown RBP eCLIP26.2■■□□□ 1.79
CROCCP2-206ENST00000639594 CCDC184Q52MB2 194 aa26.2■■□□□ 1.79
CROCCP2-206ENST00000639594 BCANQ96GW7 911 aa26.2■■□□□ 1.79
CROCCP2-206ENST00000639594 PRKRIP1Q9H875 184 aaPredicted RBP26.2■■□□□ 1.79
CROCCP2-206ENST00000639594 WDR7Q9Y4E6 1490 aa26.19■■□□□ 1.78
CROCCP2-206ENST00000639594 SYCP2Q9BX26 1530 aa26.19■■□□□ 1.78
CROCCP2-206ENST00000639594 KDM5CP41229 1560 aa26.19■■□□□ 1.78
CROCCP2-206ENST00000639594 ARHGAP5Q13017 1502 aa26.18■■□□□ 1.78
CROCCP2-206ENST00000639594 USP47Q96K76 1375 aa26.17■■□□□ 1.78
CROCCP2-206ENST00000639594 RSPH4AQ5TD94 716 aa26.17■■□□□ 1.78
CROCCP2-206ENST00000639594 UHRF1BP1Q6BDS2 1440 aa26.17■■□□□ 1.78
CROCCP2-206ENST00000639594 ASXL2Q76L83 1435 aa26.15■■□□□ 1.78
CROCCP2-206ENST00000639594 RIMBP3CA6NJZ7 1639 aa26.15■■□□□ 1.78
CROCCP2-206ENST00000639594 RIMBP3BA6NNM3 1639 aa26.15■■□□□ 1.78
CROCCP2-206ENST00000639594 RIMBP3Q9UFD9 1639 aa26.15■■□□□ 1.78
CROCCP2-206ENST00000639594 ARHGEF12Q9NZN5 1544 aa26.15■■□□□ 1.78
CROCCP2-206ENST00000639594 NEFLP07196 543 aa26.14■■□□□ 1.78
CROCCP2-206ENST00000639594 MAST1Q9Y2H9 1570 aa26.14■■□□□ 1.78
CROCCP2-206ENST00000639594 FAM135AQ9P2D6 1515 aa26.14■■□□□ 1.77
CROCCP2-206ENST00000639594 RALGAPBQ86X10 1494 aa26.12■■□□□ 1.77
CROCCP2-206ENST00000639594 PLCH2O75038 1416 aa26.1■■□□□ 1.77
CROCCP2-206ENST00000639594 UNC13BO14795 1591 aa26.08■■□□□ 1.76
CROCCP2-206ENST00000639594 NPM1P06748 294 aaKnown RBP eCLIP26.07■■□□□ 1.76
CROCCP2-206ENST00000639594 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms