RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
SCARB2-216ENST00000639300 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
SCARB2-216ENST00000639300 KIF21BO75037 1637 aa18.75■□□□□ 0.59
SCARB2-216ENST00000639300 PHLDB1Q86UU1 1377 aa18.74■□□□□ 0.59
SCARB2-216ENST00000639300 BECN1Q14457 450 aa18.74■□□□□ 0.59
SCARB2-216ENST00000639300 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
SCARB2-216ENST00000639300 ST20-MTHFSA0A0A6YYL1 179 aa18.74■□□□□ 0.59
SCARB2-216ENST00000639300 MLECQ14165 292 aa18.73■□□□□ 0.59
SCARB2-216ENST00000639300 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
SCARB2-216ENST00000639300 RCAN3Q9UKA8 241 aa18.73■□□□□ 0.59
SCARB2-216ENST00000639300 STK26Q9P289 416 aa18.72■□□□□ 0.59
SCARB2-216ENST00000639300 KANK1Q14678 1352 aa18.72■□□□□ 0.59
SCARB2-216ENST00000639300 SRPK2P78362 688 aaKnown RBP18.72■□□□□ 0.59
SCARB2-216ENST00000639300 KIF3BO15066 747 aa18.71■□□□□ 0.59
SCARB2-216ENST00000639300 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
SCARB2-216ENST00000639300 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-216ENST00000639300 RALBP1Q15311 655 aa18.7■□□□□ 0.58
SCARB2-216ENST00000639300 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-216ENST00000639300 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
SCARB2-216ENST00000639300 SOX12O15370 315 aa18.66■□□□□ 0.58
SCARB2-216ENST00000639300 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
SCARB2-216ENST00000639300 ERICH6BQ5W0A0 696 aa18.65■□□□□ 0.58
SCARB2-216ENST00000639300 NLRP13Q86W25 1043 aa18.64■□□□□ 0.58
SCARB2-216ENST00000639300 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
SCARB2-216ENST00000639300 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
SCARB2-216ENST00000639300 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
SCARB2-216ENST00000639300 SPAG9O60271 1321 aaKnown RBP18.61■□□□□ 0.57
SCARB2-216ENST00000639300 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
SCARB2-216ENST00000639300 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
SCARB2-216ENST00000639300 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCARB2-216ENST00000639300 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
SCARB2-216ENST00000639300 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
SCARB2-216ENST00000639300 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
SCARB2-216ENST00000639300 LMOD2Q6P5Q4 547 aa18.58■□□□□ 0.56
SCARB2-216ENST00000639300 PANK3Q9H999 370 aa18.57■□□□□ 0.56
SCARB2-216ENST00000639300 A0A0G2JS52 829 aa18.56■□□□□ 0.56
SCARB2-216ENST00000639300 RTN4Q9NQC3 1192 aaKnown RBP18.56■□□□□ 0.56
SCARB2-216ENST00000639300 USP47Q96K76 1375 aa18.55■□□□□ 0.56
SCARB2-216ENST00000639300 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
SCARB2-216ENST00000639300 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCARB2-216ENST00000639300 NCLP19338 710 aaKnown RBP18.53■□□□□ 0.56
SCARB2-216ENST00000639300 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
SCARB2-216ENST00000639300 GOLGA2Q08379 1002 aa18.52■□□□□ 0.56
SCARB2-216ENST00000639300 PTPRGP23470 1445 aa18.52■□□□□ 0.56
SCARB2-216ENST00000639300 MS4A1P11836 297 aa18.52■□□□□ 0.55
SCARB2-216ENST00000639300 PRXQ9BXM0 1461 aa18.52■□□□□ 0.55
SCARB2-216ENST00000639300 CLUAP1Q96AJ1 413 aa18.51■□□□□ 0.55
SCARB2-216ENST00000639300 CCDC144AA2RUR9 1427 aa18.51■□□□□ 0.55
SCARB2-216ENST00000639300 PLIN1O60240 522 aa18.5■□□□□ 0.55
SCARB2-216ENST00000639300 SPRYD3Q8NCJ5 442 aa18.5■□□□□ 0.55
SCARB2-216ENST00000639300 UACAQ9BZF9 1416 aa18.5■□□□□ 0.55
SCARB2-216ENST00000639300 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
SCARB2-216ENST00000639300 CFTRP13569 1480 aa18.49■□□□□ 0.55
SCARB2-216ENST00000639300 TPRNQ4KMQ1 711 aa18.49■□□□□ 0.55
SCARB2-216ENST00000639300 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
SCARB2-216ENST00000639300 DEKP35659 375 aaKnown RBP18.49■□□□□ 0.55
SCARB2-216ENST00000639300 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
SCARB2-216ENST00000639300 GOLGA6L22H0YM25 854 aa18.48■□□□□ 0.55
SCARB2-216ENST00000639300 KIF7Q2M1P5 1343 aa18.48■□□□□ 0.55
SCARB2-216ENST00000639300 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
SCARB2-216ENST00000639300 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
SCARB2-216ENST00000639300 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
SCARB2-216ENST00000639300 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
SCARB2-216ENST00000639300 WASHC2CQ9Y4E1 1318 aa18.47■□□□□ 0.55
SCARB2-216ENST00000639300 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
SCARB2-216ENST00000639300 HDGFL2Q7Z4V5 671 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-216ENST00000639300 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
SCARB2-216ENST00000639300 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
SCARB2-216ENST00000639300 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
SCARB2-216ENST00000639300 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
SCARB2-216ENST00000639300 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
SCARB2-216ENST00000639300 TRIM44Q96DX7 344 aaPredicted RBP18.44■□□□□ 0.54
SCARB2-216ENST00000639300 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
SCARB2-216ENST00000639300 NESP48681 1621 aa18.44■□□□□ 0.54
SCARB2-216ENST00000639300 APBB1O00213 710 aa18.43■□□□□ 0.54
SCARB2-216ENST00000639300 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
SCARB2-216ENST00000639300 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
SCARB2-216ENST00000639300 HSP90AB1P08238 724 aaKnown RBP18.41■□□□□ 0.54
SCARB2-216ENST00000639300 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
SCARB2-216ENST00000639300 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-216ENST00000639300 CUX1P39880 1505 aa18.4■□□□□ 0.54
SCARB2-216ENST00000639300 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.53
SCARB2-216ENST00000639300 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.53
SCARB2-216ENST00000639300 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
SCARB2-216ENST00000639300 HDGFP51858 240 aaKnown RBP18.39■□□□□ 0.53
SCARB2-216ENST00000639300 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
SCARB2-216ENST00000639300 APAF1O14727 1248 aa18.38■□□□□ 0.53
SCARB2-216ENST00000639300 SMC4Q9NTJ3 1288 aa18.38■□□□□ 0.53
SCARB2-216ENST00000639300 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
SCARB2-216ENST00000639300 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
SCARB2-216ENST00000639300 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
SCARB2-216ENST00000639300 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
SCARB2-216ENST00000639300 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
SCARB2-216ENST00000639300 RRP1P56182 461 aaKnown RBP18.36■□□□□ 0.53
SCARB2-216ENST00000639300 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
SCARB2-216ENST00000639300 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
SCARB2-216ENST00000639300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCARB2-216ENST00000639300 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
SCARB2-216ENST00000639300 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
SCARB2-216ENST00000639300 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms