RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PLA2R1Q13018 1463 aa7.06□□□□□ -1.28
CCDC7-213ENST00000639290 SLC34A2O95436 690 aa7.05□□□□□ -1.28
CCDC7-213ENST00000639290 POTEAQ6S8J7 498 aa7.03□□□□□ -1.28
CCDC7-213ENST00000639290 PKD2Q13563 968 aa7.01□□□□□ -1.29
CCDC7-213ENST00000639290 FHOD3Q2V2M9 1422 aa7.01□□□□□ -1.29
CCDC7-213ENST00000639290 ABCA9Q8IUA7 1624 aa7.01□□□□□ -1.29
CCDC7-213ENST00000639290 ALKQ9UM73 1620 aa7□□□□□ -1.29
CCDC7-213ENST00000639290 RICTORQ6R327 1708 aa6.99□□□□□ -1.29
CCDC7-213ENST00000639290 ZFYVE16Q7Z3T8 1539 aa6.99□□□□□ -1.29
CCDC7-213ENST00000639290 CFAP74Q9C0B2 1584 aa6.99□□□□□ -1.29
CCDC7-213ENST00000639290 WRNQ14191 1432 aaPredicted RBP eCLIP6.99□□□□□ -1.29
CCDC7-213ENST00000639290 RNF17Q9BXT8 1623 aaKnown RBP6.98□□□□□ -1.29
CCDC7-213ENST00000639290 RBM33Q96EV2 1170 aaKnown RBP6.98□□□□□ -1.29
CCDC7-213ENST00000639290 CAMSAP1Q5T5Y3 1602 aa6.98□□□□□ -1.29
CCDC7-213ENST00000639290 TRAPPC8Q9Y2L5 1435 aa6.98□□□□□ -1.29
CCDC7-213ENST00000639290 ZNF142P52746 1687 aaPredicted RBP6.98□□□□□ -1.29
CCDC7-213ENST00000639290 TCOF1Q13428 1488 aaKnown RBP6.98□□□□□ -1.29
CCDC7-213ENST00000639290 PPP4R3CPQ6ZMV5 832 aa6.98□□□□□ -1.29
CCDC7-213ENST00000639290 ZRANB1Q9UGI0 708 aa6.98□□□□□ -1.29
CCDC7-213ENST00000639290 ZNF335Q9H4Z2 1342 aaPredicted RBP6.98□□□□□ -1.29
CCDC7-213ENST00000639290 NPATQ14207 1427 aa6.97□□□□□ -1.29
CCDC7-213ENST00000639290 SYNMO15061 1565 aa6.96□□□□□ -1.3
CCDC7-213ENST00000639290 RAPGEF6Q8TEU7 1601 aa6.96□□□□□ -1.3
CCDC7-213ENST00000639290 RAPGEF2Q9Y4G8 1499 aa6.95□□□□□ -1.3
CCDC7-213ENST00000639290 NHSL1Q5SYE7 1610 aa6.95□□□□□ -1.3
CCDC7-213ENST00000639290 DENND4BO75064 1496 aaPredicted RBP6.95□□□□□ -1.3
CCDC7-213ENST00000639290 PIP4K2BP78356 416 aa6.95□□□□□ -1.3
CCDC7-213ENST00000639290 RAPGEF3O95398 923 aa6.94□□□□□ -1.3
CCDC7-213ENST00000639290 LRRC7Q96NW7 1537 aa6.94□□□□□ -1.3
CCDC7-213ENST00000639290 C3P01024 1663 aa6.94□□□□□ -1.3
CCDC7-213ENST00000639290 SIGLEC1Q9BZZ2 1709 aa6.93□□□□□ -1.3
CCDC7-213ENST00000639290 REREQ9P2R6 1566 aa6.93□□□□□ -1.3
CCDC7-213ENST00000639290 SHANK2Q9UPX8 1470 aa6.93□□□□□ -1.3
CCDC7-213ENST00000639290 C9orf84Q5VXU9 1444 aa6.92□□□□□ -1.3
CCDC7-213ENST00000639290 CNTLNQ9NXG0 1405 aa6.92□□□□□ -1.3
CCDC7-213ENST00000639290 ABCA8O94911 1581 aa6.92□□□□□ -1.3
CCDC7-213ENST00000639290 SETBP1Q9Y6X0 1596 aa6.92□□□□□ -1.3
CCDC7-213ENST00000639290 AGLP35573 1532 aa6.92□□□□□ -1.3
CCDC7-213ENST00000639290 MROH2AA6NES4 1674 aa6.91□□□□□ -1.3
CCDC7-213ENST00000639290 ZNF772Q68DY9 489 aaPredicted RBP6.91□□□□□ -1.3
CCDC7-213ENST00000639290 BIVM-ERCC5R4GMW8 1640 aa6.91□□□□□ -1.3
CCDC7-213ENST00000639290 CDK13Q14004 1512 aaKnown RBP6.9□□□□□ -1.3
CCDC7-213ENST00000639290 ATP10AO60312 1499 aa6.9□□□□□ -1.3
CCDC7-213ENST00000639290 IQGAP2Q13576 1575 aa6.89□□□□□ -1.31
CCDC7-213ENST00000639290 DISP1Q96F81 1524 aa6.88□□□□□ -1.31
CCDC7-213ENST00000639290 FAM135BQ49AJ0 1406 aa6.88□□□□□ -1.31
CCDC7-213ENST00000639290 KDM5CP41229 1560 aa6.88□□□□□ -1.31
CCDC7-213ENST00000639290 CNKSR2Q8WXI2 1034 aa6.88□□□□□ -1.31
CCDC7-213ENST00000639290 UGGT2Q9NYU1 1516 aa6.88□□□□□ -1.31
CCDC7-213ENST00000639290 POLR1AO95602 1720 aaPredicted RBP6.87□□□□□ -1.31
CCDC7-213ENST00000639290 YY1P25490 414 aa6.87□□□□□ -1.31
CCDC7-213ENST00000639290 CCDC125Q86Z20 511 aa6.87□□□□□ -1.31
CCDC7-213ENST00000639290 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
CCDC7-213ENST00000639290 SUPT6HQ7KZ85 1726 aaKnown RBP6.85□□□□□ -1.31
CCDC7-213ENST00000639290 SENP3-EIF4A1A0A087X0R7 540 aa6.84□□□□□ -1.31
CCDC7-213ENST00000639290 HOXD11P31277 338 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-213ENST00000639290 ATAD2Q6PL18 1390 aa6.84□□□□□ -1.31
CCDC7-213ENST00000639290 MYO3AQ8NEV4 1616 aa6.84□□□□□ -1.31
CCDC7-213ENST00000639290 LRRC9Q6ZRR7 1453 aa6.84□□□□□ -1.32
CCDC7-213ENST00000639290 CEP170BQ9Y4F5 1589 aaPredicted RBP6.83□□□□□ -1.32
CCDC7-213ENST00000639290 HECW1Q76N89 1606 aa6.83□□□□□ -1.32
CCDC7-213ENST00000639290 NWD1Q149M9 1564 aa6.82□□□□□ -1.32
CCDC7-213ENST00000639290 NCKAP5LQ9HCH0 1330 aa6.82□□□□□ -1.32
CCDC7-213ENST00000639290 RXRBP28702 533 aa6.82□□□□□ -1.32
CCDC7-213ENST00000639290 RNF216Q9NWF9 866 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-213ENST00000639290 DEPDC5O75140 1603 aa6.81□□□□□ -1.32
CCDC7-213ENST00000639290 JCADQ9P266 1359 aa6.81□□□□□ -1.32
CCDC7-213ENST00000639290 DCAF8L1A6NGE4 600 aa6.81□□□□□ -1.32
CCDC7-213ENST00000639290 CEBPAP49715 358 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-213ENST00000639290 NEURL4Q96JN8 1562 aa6.81□□□□□ -1.32
CCDC7-213ENST00000639290 FGD6Q6ZV73 1430 aa6.8□□□□□ -1.32
CCDC7-213ENST00000639290 SPATA31A6Q5VVP1 1343 aa6.8□□□□□ -1.32
CCDC7-213ENST00000639290 MED14O60244 1454 aa6.8□□□□□ -1.32
CCDC7-213ENST00000639290 KIF14Q15058 1648 aa6.79□□□□□ -1.32
CCDC7-213ENST00000639290 NCBP3Q53F19 620 aaKnown RBP6.79□□□□□ -1.32
CCDC7-213ENST00000639290 KCNH8Q96L42 1107 aa6.79□□□□□ -1.32
CCDC7-213ENST00000639290 KDM5DQ9BY66 1539 aa6.78□□□□□ -1.32
CCDC7-213ENST00000639290 C1QTNF8P60827 252 aa6.77□□□□□ -1.33
CCDC7-213ENST00000639290 A2ML1A8K2U0 1454 aa6.77□□□□□ -1.33
CCDC7-213ENST00000639290 MLECQ14165 292 aa6.76□□□□□ -1.33
CCDC7-213ENST00000639290 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
CCDC7-213ENST00000639290 SHPRHQ149N8 1683 aa6.76□□□□□ -1.33
CCDC7-213ENST00000639290 ATP10BO94823 1461 aa6.76□□□□□ -1.33
CCDC7-213ENST00000639290 GOLGA3Q08378 1498 aa6.76□□□□□ -1.33
CCDC7-213ENST00000639290 RGS12O14924 1447 aa6.75□□□□□ -1.33
CCDC7-213ENST00000639290 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
CCDC7-213ENST00000639290 DNMT1P26358 1616 aaKnown RBP6.74□□□□□ -1.33
CCDC7-213ENST00000639290 ROBO1Q9Y6N7 1651 aa6.72□□□□□ -1.33
CCDC7-213ENST00000639290 PHLPP1O60346 1717 aa6.72□□□□□ -1.33
CCDC7-213ENST00000639290 DIP2CQ9Y2E4 1556 aa6.72□□□□□ -1.33
CCDC7-213ENST00000639290 IQGAP1P46940 1657 aa6.71□□□□□ -1.34
CCDC7-213ENST00000639290 RBM6P78332 1123 aaKnown RBP6.71□□□□□ -1.34
CCDC7-213ENST00000639290 BCL9LQ86UU0 1499 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC7-213ENST00000639290 LRP6O75581 1613 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 RNF39Q9H2S5 420 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 IGF1RP08069 1367 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC7-213ENST00000639290 COL16A1Q07092 1604 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-213ENST00000639290 STRCP1A6NGW2 1772 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms