RNA–Protein interactions for RNA: ENST00000639042.1

GFAP-231, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-231ENST00000639042 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
GFAP-231ENST00000639042 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
GFAP-231ENST00000639042 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
GFAP-231ENST00000639042 DAPK1P53355 1430 aa17.07■□□□□ 0.32
GFAP-231ENST00000639042 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
GFAP-231ENST00000639042 ABCC5O15440 1437 aa17.06■□□□□ 0.32
GFAP-231ENST00000639042 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
GFAP-231ENST00000639042 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
GFAP-231ENST00000639042 ATP10BO94823 1461 aa17.04■□□□□ 0.32
GFAP-231ENST00000639042 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
GFAP-231ENST00000639042 MIER1Q8N108 512 aa17.02■□□□□ 0.32
GFAP-231ENST00000639042 ABCC10Q5T3U5 1492 aa17.02■□□□□ 0.32
GFAP-231ENST00000639042 PTPRGP23470 1445 aa17.02■□□□□ 0.31
GFAP-231ENST00000639042 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
GFAP-231ENST00000639042 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
GFAP-231ENST00000639042 KDM6BO15054 1643 aa17■□□□□ 0.31
GFAP-231ENST00000639042 KIF14Q15058 1648 aa17■□□□□ 0.31
GFAP-231ENST00000639042 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
GFAP-231ENST00000639042 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
GFAP-231ENST00000639042 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
GFAP-231ENST00000639042 CDC42BPAQ5VT25 1732 aa16.98■□□□□ 0.31
GFAP-231ENST00000639042 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
GFAP-231ENST00000639042 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
GFAP-231ENST00000639042 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
GFAP-231ENST00000639042 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.31
GFAP-231ENST00000639042 DIP2BQ9P265 1576 aa16.96■□□□□ 0.31
GFAP-231ENST00000639042 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
GFAP-231ENST00000639042 NCOA1Q15788 1441 aa16.94■□□□□ 0.3
GFAP-231ENST00000639042 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
GFAP-231ENST00000639042 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
GFAP-231ENST00000639042 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
GFAP-231ENST00000639042 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
GFAP-231ENST00000639042 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
GFAP-231ENST00000639042 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
GFAP-231ENST00000639042 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
GFAP-231ENST00000639042 MPHOSPH9Q99550 1183 aa16.91■□□□□ 0.3
GFAP-231ENST00000639042 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
GFAP-231ENST00000639042 ABCC2Q92887 1545 aa16.9■□□□□ 0.3
GFAP-231ENST00000639042 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
GFAP-231ENST00000639042 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
GFAP-231ENST00000639042 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
GFAP-231ENST00000639042 RSPH4AQ5TD94 716 aa16.85■□□□□ 0.29
GFAP-231ENST00000639042 ANKRD30AQ9BXX3 1397 aa16.85■□□□□ 0.29
GFAP-231ENST00000639042 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
GFAP-231ENST00000639042 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
GFAP-231ENST00000639042 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
GFAP-231ENST00000639042 PZPP20742 1482 aa16.84■□□□□ 0.29
GFAP-231ENST00000639042 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
GFAP-231ENST00000639042 MBD5Q9P267 1494 aa16.84■□□□□ 0.29
GFAP-231ENST00000639042 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
GFAP-231ENST00000639042 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
GFAP-231ENST00000639042 KDM5DQ9BY66 1539 aa16.82■□□□□ 0.28
GFAP-231ENST00000639042 ADRA2BP18089 450 aa16.81■□□□□ 0.28
GFAP-231ENST00000639042 MAST1Q9Y2H9 1570 aa16.79■□□□□ 0.28
GFAP-231ENST00000639042 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
GFAP-231ENST00000639042 C9orf84Q5VXU9 1444 aa16.78■□□□□ 0.28
GFAP-231ENST00000639042 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
GFAP-231ENST00000639042 GLI2P10070 1586 aa16.78■□□□□ 0.28
GFAP-231ENST00000639042 SAMD9LQ8IVG5 1584 aa16.78■□□□□ 0.28
GFAP-231ENST00000639042 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.27
GFAP-231ENST00000639042 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
GFAP-231ENST00000639042 PPRC1Q5VV67 1664 aaKnown RBP16.76■□□□□ 0.27
GFAP-231ENST00000639042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.27
GFAP-231ENST00000639042 CCDC141Q6ZP82 1450 aa16.75■□□□□ 0.27
GFAP-231ENST00000639042 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
GFAP-231ENST00000639042 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
GFAP-231ENST00000639042 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
GFAP-231ENST00000639042 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
GFAP-231ENST00000639042 L3MBTL2Q969R5 705 aa16.73■□□□□ 0.27
GFAP-231ENST00000639042 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
GFAP-231ENST00000639042 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
GFAP-231ENST00000639042 MYO5CQ9NQX4 1742 aa16.72■□□□□ 0.27
GFAP-231ENST00000639042 ARAP3Q8WWN8 1544 aa16.71■□□□□ 0.26
GFAP-231ENST00000639042 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
GFAP-231ENST00000639042 PLCH2O75038 1416 aa16.69■□□□□ 0.26
GFAP-231ENST00000639042 DDX10Q13206 875 aaKnown RBP16.69■□□□□ 0.26
GFAP-231ENST00000639042 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
GFAP-231ENST00000639042 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
GFAP-231ENST00000639042 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
GFAP-231ENST00000639042 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
GFAP-231ENST00000639042 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.26
GFAP-231ENST00000639042 SPATA31E1Q6ZUB1 1445 aa16.66■□□□□ 0.26
GFAP-231ENST00000639042 KCNA4P22459 653 aa16.65■□□□□ 0.26
GFAP-231ENST00000639042 FOXD1Q16676 465 aa16.65■□□□□ 0.26
GFAP-231ENST00000639042 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
GFAP-231ENST00000639042 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
GFAP-231ENST00000639042 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.26
GFAP-231ENST00000639042 COL17A1Q9UMD9 1497 aaPredicted RBP16.64■□□□□ 0.25
GFAP-231ENST00000639042 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
GFAP-231ENST00000639042 UNC13BO14795 1591 aa16.64■□□□□ 0.25
GFAP-231ENST00000639042 EIF4G2P78344 907 aaKnown RBP eCLIP16.64■□□□□ 0.25
GFAP-231ENST00000639042 SYCP2Q9BX26 1530 aa16.64■□□□□ 0.25
GFAP-231ENST00000639042 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
GFAP-231ENST00000639042 PKD2Q13563 968 aa16.63■□□□□ 0.25
GFAP-231ENST00000639042 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
GFAP-231ENST00000639042 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
GFAP-231ENST00000639042 ARHGEF12Q9NZN5 1544 aa16.62■□□□□ 0.25
GFAP-231ENST00000639042 NUP155O75694 1391 aa16.62■□□□□ 0.25
GFAP-231ENST00000639042 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
GFAP-231ENST00000639042 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms