RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 HNRNPUL2Q1KMD3 747 aaKnown RBP10.18□□□□□ -0.78
NECAP1-213ENST00000638883 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
NECAP1-213ENST00000638883 RAPGEF6Q8TEU7 1601 aa10.18□□□□□ -0.78
NECAP1-213ENST00000638883 FBLN2P98095 1184 aa10.17□□□□□ -0.78
NECAP1-213ENST00000638883 PREX2Q70Z35 1606 aa10.17□□□□□ -0.78
NECAP1-213ENST00000638883 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
NECAP1-213ENST00000638883 POLR1AO95602 1720 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-213ENST00000638883 SALL2Q9Y467 1007 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-213ENST00000638883 KDM6BO15054 1643 aa10.16□□□□□ -0.78
NECAP1-213ENST00000638883 IFT172Q9UG01 1749 aa10.15□□□□□ -0.78
NECAP1-213ENST00000638883 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-213ENST00000638883 KIF14Q15058 1648 aa10.15□□□□□ -0.78
NECAP1-213ENST00000638883 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
NECAP1-213ENST00000638883 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
NECAP1-213ENST00000638883 TAOK2Q9UL54 1235 aa10.14□□□□□ -0.79
NECAP1-213ENST00000638883 GAPVD1Q14C86 1478 aa10.14□□□□□ -0.79
NECAP1-213ENST00000638883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.79
NECAP1-213ENST00000638883 PDS5BQ9NTI5 1447 aa10.13□□□□□ -0.79
NECAP1-213ENST00000638883 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-213ENST00000638883 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
NECAP1-213ENST00000638883 ABCC2Q92887 1545 aa10.12□□□□□ -0.79
NECAP1-213ENST00000638883 SYNJ2O15056 1496 aa10.11□□□□□ -0.79
NECAP1-213ENST00000638883 TCOF1Q13428 1488 aaKnown RBP10.11□□□□□ -0.79
NECAP1-213ENST00000638883 FRMPD1Q5SYB0 1578 aa10.11□□□□□ -0.79
NECAP1-213ENST00000638883 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
NECAP1-213ENST00000638883 UBE2Q2Q8WVN8 375 aa10.11□□□□□ -0.79
NECAP1-213ENST00000638883 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
NECAP1-213ENST00000638883 FYCO1Q9BQS8 1478 aa10.1□□□□□ -0.79
NECAP1-213ENST00000638883 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
NECAP1-213ENST00000638883 NBR1Q14596 966 aa10.1□□□□□ -0.79
NECAP1-213ENST00000638883 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-213ENST00000638883 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
NECAP1-213ENST00000638883 CLIP1P30622 1438 aa10.09□□□□□ -0.79
NECAP1-213ENST00000638883 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
NECAP1-213ENST00000638883 ABCC10Q5T3U5 1492 aa10.09□□□□□ -0.79
NECAP1-213ENST00000638883 ITGAEP38570 1179 aa10.08□□□□□ -0.8
NECAP1-213ENST00000638883 RICTORQ6R327 1708 aa10.08□□□□□ -0.8
NECAP1-213ENST00000638883 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
NECAP1-213ENST00000638883 NUP153P49790 1475 aaKnown RBP10.07□□□□□ -0.8
NECAP1-213ENST00000638883 RRBP1Q9P2E9 1410 aaKnown RBP10.07□□□□□ -0.8
NECAP1-213ENST00000638883 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
NECAP1-213ENST00000638883 TTC37Q6PGP7 1564 aa10.06□□□□□ -0.8
NECAP1-213ENST00000638883 CDK11AQ9UQ88 783 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-213ENST00000638883 FHAD1B1AJZ9 1412 aa10.06□□□□□ -0.8
NECAP1-213ENST00000638883 HECW1Q76N89 1606 aa10.05□□□□□ -0.8
NECAP1-213ENST00000638883 VWDEQ8N2E2 1590 aa10.03□□□□□ -0.8
NECAP1-213ENST00000638883 UHRF1BP1LA0JNW5 1464 aa10.03□□□□□ -0.8
NECAP1-213ENST00000638883 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
NECAP1-213ENST00000638883 PKNOX2Q96KN3 472 aa10.03□□□□□ -0.8
NECAP1-213ENST00000638883 KIF27Q86VH2 1401 aa10.02□□□□□ -0.8
NECAP1-213ENST00000638883 VPS8Q8N3P4 1428 aa10.02□□□□□ -0.8
NECAP1-213ENST00000638883 INO80Q9ULG1 1556 aaPredicted RBP10.02□□□□□ -0.8
NECAP1-213ENST00000638883 KIAA0586Q9BVV6 1533 aa10.02□□□□□ -0.81
NECAP1-213ENST00000638883 RNF39Q9H2S5 420 aa10.01□□□□□ -0.81
NECAP1-213ENST00000638883 MAPKBP1O60336 1514 aa10.01□□□□□ -0.81
NECAP1-213ENST00000638883 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
NECAP1-213ENST00000638883 UNC13BO14795 1591 aa10.01□□□□□ -0.81
NECAP1-213ENST00000638883 SETD1AO15047 1707 aaKnown RBP10□□□□□ -0.81
NECAP1-213ENST00000638883 PLXNC1O60486 1568 aa10□□□□□ -0.81
NECAP1-213ENST00000638883 MYO5CQ9NQX4 1742 aa10□□□□□ -0.81
NECAP1-213ENST00000638883 GLIPR1L2Q4G1C9 344 aa10□□□□□ -0.81
NECAP1-213ENST00000638883 ARAP3Q8WWN8 1544 aa9.99□□□□□ -0.81
NECAP1-213ENST00000638883 KDM5DQ9BY66 1539 aa9.99□□□□□ -0.81
NECAP1-213ENST00000638883 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
NECAP1-213ENST00000638883 RGL2O15211 777 aa9.99□□□□□ -0.81
NECAP1-213ENST00000638883 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
NECAP1-213ENST00000638883 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-213ENST00000638883 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
NECAP1-213ENST00000638883 LRRC9Q6ZRR7 1453 aa9.95□□□□□ -0.82
NECAP1-213ENST00000638883 RIMBP3CA6NJZ7 1639 aa9.95□□□□□ -0.82
NECAP1-213ENST00000638883 RIMBP3BA6NNM3 1639 aa9.95□□□□□ -0.82
NECAP1-213ENST00000638883 RIMBP3Q9UFD9 1639 aa9.95□□□□□ -0.82
NECAP1-213ENST00000638883 KDM5CP41229 1560 aa9.94□□□□□ -0.82
NECAP1-213ENST00000638883 RNF17Q9BXT8 1623 aaKnown RBP9.94□□□□□ -0.82
NECAP1-213ENST00000638883 ZC3H13Q5T200 1668 aaKnown RBP9.94□□□□□ -0.82
NECAP1-213ENST00000638883 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
NECAP1-213ENST00000638883 GLI2P10070 1586 aa9.93□□□□□ -0.82
NECAP1-213ENST00000638883 PTPN23Q9H3S7 1636 aa9.93□□□□□ -0.82
NECAP1-213ENST00000638883 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-213ENST00000638883 EHBP1L1Q8N3D4 1523 aa9.93□□□□□ -0.82
NECAP1-213ENST00000638883 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
NECAP1-213ENST00000638883 E9PCH4 1651 aa9.93□□□□□ -0.82
NECAP1-213ENST00000638883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.92□□□□□ -0.82
NECAP1-213ENST00000638883 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
NECAP1-213ENST00000638883 POLA2Q14181 598 aa9.92□□□□□ -0.82
NECAP1-213ENST00000638883 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
NECAP1-213ENST00000638883 NEURL4Q96JN8 1562 aa9.91□□□□□ -0.82
NECAP1-213ENST00000638883 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-213ENST00000638883 PIK3C2BO00750 1634 aa9.91□□□□□ -0.82
NECAP1-213ENST00000638883 FANCIQ9NVI1 1328 aa9.9□□□□□ -0.82
NECAP1-213ENST00000638883 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
NECAP1-213ENST00000638883 PTPRKQ15262 1439 aa9.9□□□□□ -0.82
NECAP1-213ENST00000638883 EPRSP07814 1512 aaKnown RBP9.9□□□□□ -0.83
NECAP1-213ENST00000638883 CEP152O94986 1710 aa9.89□□□□□ -0.83
NECAP1-213ENST00000638883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.89□□□□□ -0.83
NECAP1-213ENST00000638883 EIF2AK4Q9P2K8 1649 aaKnown RBP9.88□□□□□ -0.83
NECAP1-213ENST00000638883 ABCA6Q8N139 1617 aa9.87□□□□□ -0.83
NECAP1-213ENST00000638883 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-213ENST00000638883 NOP58Q9Y2X3 529 aaKnown RBP9.87□□□□□ -0.83
NECAP1-213ENST00000638883 ADGRL2O95490 1459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms