RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TCERG1O14776 1098 aaKnown RBP16.1■□□□□ 0.17
CAPN3-221ENST00000638141 IGF1RP08069 1367 aa16.09■□□□□ 0.17
CAPN3-221ENST00000638141 MS4A1P11836 297 aa16.08■□□□□ 0.17
CAPN3-221ENST00000638141 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-221ENST00000638141 FBLN2P98095 1184 aa16.07■□□□□ 0.16
CAPN3-221ENST00000638141 CCDC18Q5T9S5 1454 aa16.07■□□□□ 0.16
CAPN3-221ENST00000638141 HFM1A2PYH4 1435 aa16.06■□□□□ 0.16
CAPN3-221ENST00000638141 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
CAPN3-221ENST00000638141 LAS1LQ9Y4W2 734 aaKnown RBP16.06■□□□□ 0.16
CAPN3-221ENST00000638141 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-221ENST00000638141 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
CAPN3-221ENST00000638141 PTPN23Q9H3S7 1636 aa16.04■□□□□ 0.16
CAPN3-221ENST00000638141 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
CAPN3-221ENST00000638141 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
CAPN3-221ENST00000638141 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.16
CAPN3-221ENST00000638141 BACH2Q9BYV9 841 aa16.02■□□□□ 0.15
CAPN3-221ENST00000638141 ADAMTS12P58397 1594 aa16.02■□□□□ 0.15
CAPN3-221ENST00000638141 CHD1O14646 1710 aa16.01■□□□□ 0.15
CAPN3-221ENST00000638141 FYCO1Q9BQS8 1478 aa16.01■□□□□ 0.15
CAPN3-221ENST00000638141 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
CAPN3-221ENST00000638141 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
CAPN3-221ENST00000638141 PCF11O94913 1555 aaKnown RBP16.01■□□□□ 0.15
CAPN3-221ENST00000638141 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
CAPN3-221ENST00000638141 ZMYND15Q9H091 742 aa16■□□□□ 0.15
CAPN3-221ENST00000638141 PDE4AP27815 886 aa16■□□□□ 0.15
CAPN3-221ENST00000638141 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
CAPN3-221ENST00000638141 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
CAPN3-221ENST00000638141 NFKBIBQ15653 356 aa15.99■□□□□ 0.15
CAPN3-221ENST00000638141 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
CAPN3-221ENST00000638141 CUL7Q14999 1698 aa15.98■□□□□ 0.15
CAPN3-221ENST00000638141 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
CAPN3-221ENST00000638141 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
CAPN3-221ENST00000638141 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
CAPN3-221ENST00000638141 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
CAPN3-221ENST00000638141 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
CAPN3-221ENST00000638141 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
CAPN3-221ENST00000638141 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.14
CAPN3-221ENST00000638141 GRIN2AQ12879 1464 aa15.94■□□□□ 0.14
CAPN3-221ENST00000638141 RRP9O43818 475 aaKnown RBP15.94■□□□□ 0.14
CAPN3-221ENST00000638141 FAM9BQ8IZU0 186 aa15.94■□□□□ 0.14
CAPN3-221ENST00000638141 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
CAPN3-221ENST00000638141 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
CAPN3-221ENST00000638141 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
CAPN3-221ENST00000638141 PODXL2Q9NZ53 605 aa15.93■□□□□ 0.14
CAPN3-221ENST00000638141 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
CAPN3-221ENST00000638141 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
CAPN3-221ENST00000638141 NAIPQ13075 1403 aa15.91■□□□□ 0.14
CAPN3-221ENST00000638141 GCC2Q8IWJ2 1684 aa15.9■□□□□ 0.14
CAPN3-221ENST00000638141 CEP170Q5SW79 1584 aa15.88■□□□□ 0.13
CAPN3-221ENST00000638141 DCAF11Q8TEB1 546 aa15.86■□□□□ 0.13
CAPN3-221ENST00000638141 NUP160Q12769 1436 aa15.85■□□□□ 0.13
CAPN3-221ENST00000638141 HSP90AA2PQ14568 343 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-221ENST00000638141 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
CAPN3-221ENST00000638141 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
CAPN3-221ENST00000638141 RRP1P56182 461 aaKnown RBP15.81■□□□□ 0.12
CAPN3-221ENST00000638141 RRAGDQ9NQL2 400 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-221ENST00000638141 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
CAPN3-221ENST00000638141 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
CAPN3-221ENST00000638141 L1TD1Q5T7N2 865 aaKnown RBP15.8■□□□□ 0.12
CAPN3-221ENST00000638141 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
CAPN3-221ENST00000638141 MYOM3Q5VTT5 1437 aa15.79■□□□□ 0.12
CAPN3-221ENST00000638141 ARID4BQ4LE39 1312 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-221ENST00000638141 CENPJQ9HC77 1338 aaPredicted RBP15.78■□□□□ 0.12
CAPN3-221ENST00000638141 CLCN1P35523 988 aa15.77■□□□□ 0.12
CAPN3-221ENST00000638141 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.11
CAPN3-221ENST00000638141 KIAA0586Q9BVV6 1533 aa15.77■□□□□ 0.11
CAPN3-221ENST00000638141 DENND4BO75064 1496 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-221ENST00000638141 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
CAPN3-221ENST00000638141 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
CAPN3-221ENST00000638141 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
CAPN3-221ENST00000638141 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
CAPN3-221ENST00000638141 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
CAPN3-221ENST00000638141 EHBP1L1Q8N3D4 1523 aa15.75■□□□□ 0.11
CAPN3-221ENST00000638141 CTTNBP2Q8WZ74 1663 aa15.74■□□□□ 0.11
CAPN3-221ENST00000638141 EXOC6Q8TAG9 804 aa15.74■□□□□ 0.11
CAPN3-221ENST00000638141 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
CAPN3-221ENST00000638141 LRPPRCP42704 1394 aaKnown RBP15.74■□□□□ 0.11
CAPN3-221ENST00000638141 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
CAPN3-221ENST00000638141 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
CAPN3-221ENST00000638141 FRAT2O75474 233 aaPredicted RBP15.73■□□□□ 0.11
CAPN3-221ENST00000638141 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
CAPN3-221ENST00000638141 PNNQ9H307 717 aaKnown RBP15.72■□□□□ 0.11
CAPN3-221ENST00000638141 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
CAPN3-221ENST00000638141 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
CAPN3-221ENST00000638141 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
CAPN3-221ENST00000638141 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
CAPN3-221ENST00000638141 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
CAPN3-221ENST00000638141 MTUS2Q5JR59 1369 aa15.7■□□□□ 0.1
CAPN3-221ENST00000638141 SHROOM2Q13796 1616 aa15.69■□□□□ 0.1
CAPN3-221ENST00000638141 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
CAPN3-221ENST00000638141 NAP1L5Q96NT1 182 aaPredicted RBP15.69■□□□□ 0.1
CAPN3-221ENST00000638141 UGGT2Q9NYU1 1516 aa15.69■□□□□ 0.1
CAPN3-221ENST00000638141 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
CAPN3-221ENST00000638141 INSRP06213 1382 aa15.68■□□□□ 0.1
CAPN3-221ENST00000638141 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-221ENST00000638141 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
CAPN3-221ENST00000638141 ARXQ96QS3 562 aa15.68■□□□□ 0.1
CAPN3-221ENST00000638141 RCAN3Q9UKA8 241 aa15.68■□□□□ 0.1
CAPN3-221ENST00000638141 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
CAPN3-221ENST00000638141 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms