RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 RICTORQ6R327 1708 aa16.01■□□□□ 0.15
RBMS3-220ENST00000637842 ZMYM4Q5VZL5 1548 aa16■□□□□ 0.15
RBMS3-220ENST00000637842 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
RBMS3-220ENST00000637842 SETD1BQ9UPS6 1966 aaKnown RBP15.99■□□□□ 0.15
RBMS3-220ENST00000637842 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
RBMS3-220ENST00000637842 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
RBMS3-220ENST00000637842 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
RBMS3-220ENST00000637842 ATP10AO60312 1499 aa15.96■□□□□ 0.15
RBMS3-220ENST00000637842 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
RBMS3-220ENST00000637842 CFAP74Q9C0B2 1584 aa15.93■□□□□ 0.14
RBMS3-220ENST00000637842 C9orf84Q5VXU9 1444 aa15.92■□□□□ 0.14
RBMS3-220ENST00000637842 HSPA1LP34931 641 aa15.92■□□□□ 0.14
RBMS3-220ENST00000637842 HECW1Q76N89 1606 aa15.92■□□□□ 0.14
RBMS3-220ENST00000637842 NCOA1Q15788 1441 aa15.91■□□□□ 0.14
RBMS3-220ENST00000637842 MED1Q15648 1581 aaPredicted RBP15.91■□□□□ 0.14
RBMS3-220ENST00000637842 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
RBMS3-220ENST00000637842 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
RBMS3-220ENST00000637842 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
RBMS3-220ENST00000637842 TRAPPC8Q9Y2L5 1435 aa15.89■□□□□ 0.13
RBMS3-220ENST00000637842 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
RBMS3-220ENST00000637842 TOM1O60784 492 aa15.85■□□□□ 0.13
RBMS3-220ENST00000637842 RAPGEF6Q8TEU7 1601 aa15.85■□□□□ 0.13
RBMS3-220ENST00000637842 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
RBMS3-220ENST00000637842 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
RBMS3-220ENST00000637842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.13
RBMS3-220ENST00000637842 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
RBMS3-220ENST00000637842 PKD2Q13563 968 aa15.82■□□□□ 0.12
RBMS3-220ENST00000637842 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
RBMS3-220ENST00000637842 EFCAB2Q5VUJ9 269 aa15.81■□□□□ 0.12
RBMS3-220ENST00000637842 PLCH2O75038 1416 aa15.8■□□□□ 0.12
RBMS3-220ENST00000637842 CAMSAP1Q5T5Y3 1602 aa15.79■□□□□ 0.12
RBMS3-220ENST00000637842 PRXQ9BXM0 1461 aa15.77■□□□□ 0.12
RBMS3-220ENST00000637842 C3P01024 1663 aa15.77■□□□□ 0.11
RBMS3-220ENST00000637842 AFAP1Q8N556 730 aa15.76■□□□□ 0.11
RBMS3-220ENST00000637842 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
RBMS3-220ENST00000637842 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
RBMS3-220ENST00000637842 ZNF518AQ6AHZ1 1483 aa15.74■□□□□ 0.11
RBMS3-220ENST00000637842 NPATQ14207 1427 aa15.72■□□□□ 0.11
RBMS3-220ENST00000637842 SAMD9Q5K651 1589 aa15.72■□□□□ 0.11
RBMS3-220ENST00000637842 AGLP35573 1532 aa15.71■□□□□ 0.11
RBMS3-220ENST00000637842 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
RBMS3-220ENST00000637842 REREQ9P2R6 1566 aa15.69■□□□□ 0.1
RBMS3-220ENST00000637842 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
RBMS3-220ENST00000637842 RGS17Q9UGC6 210 aaPredicted RBP15.67■□□□□ 0.1
RBMS3-220ENST00000637842 TCOF1Q13428 1488 aaKnown RBP15.67■□□□□ 0.1
RBMS3-220ENST00000637842 PTPRKQ15262 1439 aa15.66■□□□□ 0.1
RBMS3-220ENST00000637842 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
RBMS3-220ENST00000637842 KDM5CP41229 1560 aa15.65■□□□□ 0.1
RBMS3-220ENST00000637842 DIP2CQ9Y2E4 1556 aa15.65■□□□□ 0.1
RBMS3-220ENST00000637842 CPS1P31327 1500 aa15.65■□□□□ 0.1
RBMS3-220ENST00000637842 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
RBMS3-220ENST00000637842 CDK11AQ9UQ88 783 aaPredicted RBP15.62■□□□□ 0.09
RBMS3-220ENST00000637842 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
RBMS3-220ENST00000637842 SHANK2Q9UPX8 1470 aa15.6■□□□□ 0.09
RBMS3-220ENST00000637842 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
RBMS3-220ENST00000637842 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
RBMS3-220ENST00000637842 MYO5CQ9NQX4 1742 aa15.56■□□□□ 0.08
RBMS3-220ENST00000637842 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
RBMS3-220ENST00000637842 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
RBMS3-220ENST00000637842 MROH2AA6NES4 1674 aa15.55■□□□□ 0.08
RBMS3-220ENST00000637842 POTEAQ6S8J7 498 aa15.55■□□□□ 0.08
RBMS3-220ENST00000637842 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
RBMS3-220ENST00000637842 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
RBMS3-220ENST00000637842 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
RBMS3-220ENST00000637842 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.07
RBMS3-220ENST00000637842 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
RBMS3-220ENST00000637842 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
RBMS3-220ENST00000637842 ALKQ9UM73 1620 aa15.5■□□□□ 0.07
RBMS3-220ENST00000637842 A2ML1A8K2U0 1454 aa15.5■□□□□ 0.07
RBMS3-220ENST00000637842 GGT6Q6P531 493 aa15.48■□□□□ 0.07
RBMS3-220ENST00000637842 CLIP1P30622 1438 aa15.46■□□□□ 0.07
RBMS3-220ENST00000637842 TROQ12816 1431 aaPredicted RBP15.46■□□□□ 0.07
RBMS3-220ENST00000637842 KIF14Q15058 1648 aa15.46■□□□□ 0.06
RBMS3-220ENST00000637842 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
RBMS3-220ENST00000637842 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
RBMS3-220ENST00000637842 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
RBMS3-220ENST00000637842 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
RBMS3-220ENST00000637842 VWDEQ8N2E2 1590 aa15.44■□□□□ 0.06
RBMS3-220ENST00000637842 CLTCQ00610 1675 aaKnown RBP15.43■□□□□ 0.06
RBMS3-220ENST00000637842 NEURL4Q96JN8 1562 aa15.42■□□□□ 0.06
RBMS3-220ENST00000637842 ABCC1P33527 1531 aa15.42■□□□□ 0.06
RBMS3-220ENST00000637842 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
RBMS3-220ENST00000637842 NPHP4O75161 1426 aaPredicted RBP15.41■□□□□ 0.06
RBMS3-220ENST00000637842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
RBMS3-220ENST00000637842 LRRC7Q96NW7 1537 aa15.4■□□□□ 0.06
RBMS3-220ENST00000637842 FMN1Q68DA7 1419 aa15.39■□□□□ 0.05
RBMS3-220ENST00000637842 POLR1AO95602 1720 aaPredicted RBP15.38■□□□□ 0.05
RBMS3-220ENST00000637842 MED14O60244 1454 aa15.38■□□□□ 0.05
RBMS3-220ENST00000637842 TNRQ92752 1358 aa15.38■□□□□ 0.05
RBMS3-220ENST00000637842 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
RBMS3-220ENST00000637842 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
RBMS3-220ENST00000637842 FBXO31Q5XUX0 539 aaPredicted RBP15.37■□□□□ 0.05
RBMS3-220ENST00000637842 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
RBMS3-220ENST00000637842 A2MP01023 1474 aa15.36■□□□□ 0.05
RBMS3-220ENST00000637842 RNF17Q9BXT8 1623 aaKnown RBP15.36■□□□□ 0.05
RBMS3-220ENST00000637842 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
RBMS3-220ENST00000637842 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
RBMS3-220ENST00000637842 HNRNPMP52272 730 aaKnown RBP eCLIP15.34■□□□□ 0.05
RBMS3-220ENST00000637842 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
RBMS3-220ENST00000637842 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms