RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1A-248ENST00000637774 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
CACNA1A-248ENST00000637774 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
CACNA1A-248ENST00000637774 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
CACNA1A-248ENST00000637774 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
CACNA1A-248ENST00000637774 PTPN23Q9H3S7 1636 aa13.63□□□□□ -0.23
CACNA1A-248ENST00000637774 L3MBTL2Q969R5 705 aa13.63□□□□□ -0.23
CACNA1A-248ENST00000637774 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-248ENST00000637774 PKD2Q13563 968 aa13.63□□□□□ -0.23
CACNA1A-248ENST00000637774 ANP32CO43423 234 aa13.62□□□□□ -0.23
CACNA1A-248ENST00000637774 TIMELESSQ9UNS1 1208 aa13.6□□□□□ -0.23
CACNA1A-248ENST00000637774 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
CACNA1A-248ENST00000637774 NUP160Q12769 1436 aa13.59□□□□□ -0.23
CACNA1A-248ENST00000637774 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
CACNA1A-248ENST00000637774 DAPK1P53355 1430 aa13.58□□□□□ -0.24
CACNA1A-248ENST00000637774 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
CACNA1A-248ENST00000637774 NUP155O75694 1391 aa13.57□□□□□ -0.24
CACNA1A-248ENST00000637774 ABCC5O15440 1437 aa13.57□□□□□ -0.24
CACNA1A-248ENST00000637774 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
CACNA1A-248ENST00000637774 ARHGEF11O15085 1522 aa13.57□□□□□ -0.24
CACNA1A-248ENST00000637774 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
CACNA1A-248ENST00000637774 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
CACNA1A-248ENST00000637774 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-248ENST00000637774 ATP10BO94823 1461 aa13.56□□□□□ -0.24
CACNA1A-248ENST00000637774 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
CACNA1A-248ENST00000637774 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-248ENST00000637774 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
CACNA1A-248ENST00000637774 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
CACNA1A-248ENST00000637774 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
CACNA1A-248ENST00000637774 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
CACNA1A-248ENST00000637774 KIF15Q9NS87 1388 aa13.48□□□□□ -0.25
CACNA1A-248ENST00000637774 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
CACNA1A-248ENST00000637774 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-248ENST00000637774 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
CACNA1A-248ENST00000637774 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
CACNA1A-248ENST00000637774 NCOA1Q15788 1441 aa13.47□□□□□ -0.25
CACNA1A-248ENST00000637774 KIF14Q15058 1648 aa13.47□□□□□ -0.25
CACNA1A-248ENST00000637774 SENP3-EIF4A1A0A087X0R7 540 aa13.46□□□□□ -0.26
CACNA1A-248ENST00000637774 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.26
CACNA1A-248ENST00000637774 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
CACNA1A-248ENST00000637774 KDM6BO15054 1643 aa13.45□□□□□ -0.26
CACNA1A-248ENST00000637774 BCANQ96GW7 911 aa13.45□□□□□ -0.26
CACNA1A-248ENST00000637774 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
CACNA1A-248ENST00000637774 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
CACNA1A-248ENST00000637774 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-248ENST00000637774 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
CACNA1A-248ENST00000637774 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
CACNA1A-248ENST00000637774 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
CACNA1A-248ENST00000637774 CHGAP10645 457 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-248ENST00000637774 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
CACNA1A-248ENST00000637774 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
CACNA1A-248ENST00000637774 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-248ENST00000637774 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.26
CACNA1A-248ENST00000637774 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
CACNA1A-248ENST00000637774 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
CACNA1A-248ENST00000637774 CHD1O14646 1710 aa13.38□□□□□ -0.27
CACNA1A-248ENST00000637774 KIF3BO15066 747 aa13.38□□□□□ -0.27
CACNA1A-248ENST00000637774 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-248ENST00000637774 ABCA8O94911 1581 aa13.36□□□□□ -0.27
CACNA1A-248ENST00000637774 NEFLP07196 543 aa13.35□□□□□ -0.27
CACNA1A-248ENST00000637774 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
CACNA1A-248ENST00000637774 GGT6Q6P531 493 aa13.34□□□□□ -0.27
CACNA1A-248ENST00000637774 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-248ENST00000637774 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
CACNA1A-248ENST00000637774 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
CACNA1A-248ENST00000637774 ABCC10Q5T3U5 1492 aa13.32□□□□□ -0.28
CACNA1A-248ENST00000637774 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-248ENST00000637774 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
CACNA1A-248ENST00000637774 FKBP8Q14318 412 aa13.3□□□□□ -0.28
CACNA1A-248ENST00000637774 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
CACNA1A-248ENST00000637774 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-248ENST00000637774 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
CACNA1A-248ENST00000637774 ITSN2Q9NZM3 1697 aa13.29□□□□□ -0.28
CACNA1A-248ENST00000637774 PZPP20742 1482 aa13.29□□□□□ -0.28
CACNA1A-248ENST00000637774 USP47Q96K76 1375 aa13.29□□□□□ -0.28
CACNA1A-248ENST00000637774 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
CACNA1A-248ENST00000637774 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
CACNA1A-248ENST00000637774 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.28
CACNA1A-248ENST00000637774 CCDC184Q52MB2 194 aa13.27□□□□□ -0.29
CACNA1A-248ENST00000637774 GCC2Q8IWJ2 1684 aa13.26□□□□□ -0.29
CACNA1A-248ENST00000637774 CCDC7Q96M83 1385 aa13.26□□□□□ -0.29
CACNA1A-248ENST00000637774 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
CACNA1A-248ENST00000637774 MBD5Q9P267 1494 aa13.25□□□□□ -0.29
CACNA1A-248ENST00000637774 RAPGEF3O95398 923 aa13.24□□□□□ -0.29
CACNA1A-248ENST00000637774 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
CACNA1A-248ENST00000637774 PLCH2O75038 1416 aa13.24□□□□□ -0.29
CACNA1A-248ENST00000637774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1A-248ENST00000637774 PRKRIP1Q9H875 184 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-248ENST00000637774 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-248ENST00000637774 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
CACNA1A-248ENST00000637774 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
CACNA1A-248ENST00000637774 ADGRL2O95490 1459 aa13.22□□□□□ -0.29
CACNA1A-248ENST00000637774 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-248ENST00000637774 KANK1Q14678 1352 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms