RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
CLN5-218ENST00000637397 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
CLN5-218ENST00000637397 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
CLN5-218ENST00000637397 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
CLN5-218ENST00000637397 PHLDB1Q86UU1 1377 aa20.4■□□□□ 0.86
CLN5-218ENST00000637397 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.86
CLN5-218ENST00000637397 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.86
CLN5-218ENST00000637397 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
CLN5-218ENST00000637397 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
CLN5-218ENST00000637397 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
CLN5-218ENST00000637397 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
CLN5-218ENST00000637397 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
CLN5-218ENST00000637397 PDE4AP27815 886 aa20.35■□□□□ 0.85
CLN5-218ENST00000637397 IGF1RP08069 1367 aa20.35■□□□□ 0.85
CLN5-218ENST00000637397 MORC1Q86VD1 984 aa20.35■□□□□ 0.85
CLN5-218ENST00000637397 MS4A1P11836 297 aa20.35■□□□□ 0.85
CLN5-218ENST00000637397 PLIN1O60240 522 aa20.34■□□□□ 0.85
CLN5-218ENST00000637397 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
CLN5-218ENST00000637397 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
CLN5-218ENST00000637397 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
CLN5-218ENST00000637397 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
CLN5-218ENST00000637397 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
CLN5-218ENST00000637397 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
CLN5-218ENST00000637397 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
CLN5-218ENST00000637397 PTMAP06454 111 aaKnown RBP20.31■□□□□ 0.84
CLN5-218ENST00000637397 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
CLN5-218ENST00000637397 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
CLN5-218ENST00000637397 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
CLN5-218ENST00000637397 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
CLN5-218ENST00000637397 WASHC2AQ641Q2 1341 aa20.29■□□□□ 0.84
CLN5-218ENST00000637397 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
CLN5-218ENST00000637397 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
CLN5-218ENST00000637397 GZF1Q9H116 711 aaPredicted RBP20.29■□□□□ 0.84
CLN5-218ENST00000637397 USP47Q96K76 1375 aa20.28■□□□□ 0.84
CLN5-218ENST00000637397 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLN5-218ENST00000637397 POGKQ9P215 609 aa20.28■□□□□ 0.84
CLN5-218ENST00000637397 LRRC9Q6ZRR7 1453 aa20.27■□□□□ 0.84
CLN5-218ENST00000637397 FGD6Q6ZV73 1430 aa20.26■□□□□ 0.83
CLN5-218ENST00000637397 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
CLN5-218ENST00000637397 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
CLN5-218ENST00000637397 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
CLN5-218ENST00000637397 USP35Q9P2H5 1018 aa20.25■□□□□ 0.83
CLN5-218ENST00000637397 SAFB2Q14151 953 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLN5-218ENST00000637397 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
CLN5-218ENST00000637397 PANK3Q9H999 370 aa20.23■□□□□ 0.83
CLN5-218ENST00000637397 CHMP4BQ9H444 224 aaKnown RBP20.23■□□□□ 0.83
CLN5-218ENST00000637397 CLUAP1Q96AJ1 413 aa20.23■□□□□ 0.83
CLN5-218ENST00000637397 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
CLN5-218ENST00000637397 RWDD1Q9H446 243 aaPredicted RBP20.22■□□□□ 0.83
CLN5-218ENST00000637397 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
CLN5-218ENST00000637397 U2AF1L5P0DN76 240 aaPredicted RBP20.22■□□□□ 0.83
CLN5-218ENST00000637397 U2AF1Q01081 240 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLN5-218ENST00000637397 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
CLN5-218ENST00000637397 CNTLNQ9NXG0 1405 aa20.2■□□□□ 0.82
CLN5-218ENST00000637397 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
CLN5-218ENST00000637397 CARMIL2Q6F5E8 1435 aa20.19■□□□□ 0.82
CLN5-218ENST00000637397 KANK1Q14678 1352 aa20.19■□□□□ 0.82
CLN5-218ENST00000637397 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
CLN5-218ENST00000637397 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
CLN5-218ENST00000637397 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
CLN5-218ENST00000637397 ITPRIPQ8IWB1 547 aa20.17■□□□□ 0.82
CLN5-218ENST00000637397 FAM161AQ3B820 660 aa20.17■□□□□ 0.82
CLN5-218ENST00000637397 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
CLN5-218ENST00000637397 PLCB2Q00722 1185 aa20.16■□□□□ 0.82
CLN5-218ENST00000637397 PMFBP1Q8TBY8 1022 aa20.16■□□□□ 0.82
CLN5-218ENST00000637397 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
CLN5-218ENST00000637397 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
CLN5-218ENST00000637397 CENPJQ9HC77 1338 aaPredicted RBP20.16■□□□□ 0.82
CLN5-218ENST00000637397 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
CLN5-218ENST00000637397 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
CLN5-218ENST00000637397 GSE1Q14687 1217 aa20.15■□□□□ 0.82
CLN5-218ENST00000637397 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
CLN5-218ENST00000637397 ARID4BQ4LE39 1312 aaPredicted RBP20.15■□□□□ 0.82
CLN5-218ENST00000637397 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
CLN5-218ENST00000637397 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
CLN5-218ENST00000637397 IPO8O15397 1037 aaKnown RBP20.12■□□□□ 0.81
CLN5-218ENST00000637397 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
CLN5-218ENST00000637397 STK26Q9P289 416 aa20.11■□□□□ 0.81
CLN5-218ENST00000637397 GOLGA6L3A6NEY3 463 aa20.11■□□□□ 0.81
CLN5-218ENST00000637397 GGT6Q6P531 493 aa20.11■□□□□ 0.81
CLN5-218ENST00000637397 MSNP26038 577 aaKnown RBP20.1■□□□□ 0.81
CLN5-218ENST00000637397 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
CLN5-218ENST00000637397 PRXQ9BXM0 1461 aa20.1■□□□□ 0.81
CLN5-218ENST00000637397 GBP4Q96PP9 640 aa20.1■□□□□ 0.81
CLN5-218ENST00000637397 SMC4Q9NTJ3 1288 aa20.1■□□□□ 0.81
CLN5-218ENST00000637397 APBB1O00213 710 aa20.1■□□□□ 0.81
CLN5-218ENST00000637397 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
CLN5-218ENST00000637397 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
CLN5-218ENST00000637397 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
CLN5-218ENST00000637397 EFCAB2Q5VUJ9 269 aa20.08■□□□□ 0.81
CLN5-218ENST00000637397 BCL2L13Q9BXK5 485 aa20.08■□□□□ 0.8
CLN5-218ENST00000637397 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.8
CLN5-218ENST00000637397 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
CLN5-218ENST00000637397 APAF1O14727 1248 aa20.06■□□□□ 0.8
CLN5-218ENST00000637397 RSPH4AQ5TD94 716 aa20.05■□□□□ 0.8
CLN5-218ENST00000637397 COG6Q9Y2V7 657 aa20.05■□□□□ 0.8
CLN5-218ENST00000637397 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
CLN5-218ENST00000637397 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
CLN5-218ENST00000637397 NCOA2Q15596 1464 aa20.04■□□□□ 0.8
CLN5-218ENST00000637397 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms