RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-285ENST00000637239 HIRIP3Q9BW71 556 aaPredicted RBP8.53□□□□□ -1.04
TCF4-285ENST00000637239 IFT140Q96RY7 1462 aa8.53□□□□□ -1.04
TCF4-285ENST00000637239 STK26Q9P289 416 aa8.52□□□□□ -1.04
TCF4-285ENST00000637239 FMN1Q68DA7 1419 aa8.52□□□□□ -1.05
TCF4-285ENST00000637239 LAMC3Q9Y6N6 1575 aa8.52□□□□□ -1.05
TCF4-285ENST00000637239 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.05
TCF4-285ENST00000637239 JPH4Q96JJ6 628 aa8.51□□□□□ -1.05
TCF4-285ENST00000637239 RSPH4AQ5TD94 716 aa8.51□□□□□ -1.05
TCF4-285ENST00000637239 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
TCF4-285ENST00000637239 ANP32EQ9BTT0 268 aa8.51□□□□□ -1.05
TCF4-285ENST00000637239 WIZO95785 1651 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 CEP162Q5TB80 1403 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 NGDNQ8NEJ9 315 aaKnown RBP8.5□□□□□ -1.05
TCF4-285ENST00000637239 WASHC2CQ9Y4E1 1318 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 MS4A1P11836 297 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 TMF1P82094 1093 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 FGD1P98174 961 aa8.5□□□□□ -1.05
TCF4-285ENST00000637239 GTF2E1P29083 439 aaPredicted RBP8.49□□□□□ -1.05
TCF4-285ENST00000637239 WASHC2AQ641Q2 1341 aa8.49□□□□□ -1.05
TCF4-285ENST00000637239 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
TCF4-285ENST00000637239 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
TCF4-285ENST00000637239 SAFB2Q14151 953 aaKnown RBP eCLIP8.48□□□□□ -1.05
TCF4-285ENST00000637239 TAF7LQ5H9L4 462 aa8.48□□□□□ -1.05
TCF4-285ENST00000637239 GAPVD1Q14C86 1478 aa8.48□□□□□ -1.05
TCF4-285ENST00000637239 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
TCF4-285ENST00000637239 GRIN2BQ13224 1484 aa8.48□□□□□ -1.05
TCF4-285ENST00000637239 CFTRP13569 1480 aa8.48□□□□□ -1.05
TCF4-285ENST00000637239 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
TCF4-285ENST00000637239 SPAG9O60271 1321 aaKnown RBP8.47□□□□□ -1.05
TCF4-285ENST00000637239 PTPRGP23470 1445 aa8.47□□□□□ -1.05
TCF4-285ENST00000637239 ATF3P18847 181 aa8.47□□□□□ -1.05
TCF4-285ENST00000637239 NCBP3Q53F19 620 aaKnown RBP8.47□□□□□ -1.05
TCF4-285ENST00000637239 KCNJ4P48050 445 aa8.47□□□□□ -1.05
TCF4-285ENST00000637239 TNIKQ9UKE5 1360 aa8.47□□□□□ -1.05
TCF4-285ENST00000637239 BECN1Q14457 450 aa8.47□□□□□ -1.05
TCF4-285ENST00000637239 TNNT2P45379 298 aaPredicted RBP8.46□□□□□ -1.05
TCF4-285ENST00000637239 CALD1Q05682 793 aaKnown RBP8.46□□□□□ -1.05
TCF4-285ENST00000637239 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
TCF4-285ENST00000637239 TRIM44Q96DX7 344 aaPredicted RBP8.46□□□□□ -1.06
TCF4-285ENST00000637239 NAP1L2Q9ULW6 460 aaPredicted RBP8.46□□□□□ -1.06
TCF4-285ENST00000637239 SENP3-EIF4A1A0A087X0R7 540 aa8.45□□□□□ -1.06
TCF4-285ENST00000637239 KIF3BO15066 747 aa8.45□□□□□ -1.06
TCF4-285ENST00000637239 MORC1Q86VD1 984 aa8.45□□□□□ -1.06
TCF4-285ENST00000637239 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
TCF4-285ENST00000637239 HDAC5Q9UQL6 1122 aa8.44□□□□□ -1.06
TCF4-285ENST00000637239 TRIM34Q9BYJ4 488 aa8.44□□□□□ -1.06
TCF4-285ENST00000637239 TAOK2Q9UL54 1235 aa8.44□□□□□ -1.06
TCF4-285ENST00000637239 CTDP1Q9Y5B0 961 aaPredicted RBP8.44□□□□□ -1.06
TCF4-285ENST00000637239 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
TCF4-285ENST00000637239 ANKRD30AQ9BXX3 1397 aa8.43□□□□□ -1.06
TCF4-285ENST00000637239 AMPHP49418 695 aa8.43□□□□□ -1.06
TCF4-285ENST00000637239 ARHGAP35Q9NRY4 1499 aa8.43□□□□□ -1.06
TCF4-285ENST00000637239 GOLGA6L22H0YM25 854 aa8.43□□□□□ -1.06
TCF4-285ENST00000637239 HMGB2P26583 209 aaKnown RBP8.43□□□□□ -1.06
TCF4-285ENST00000637239 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.43□□□□□ -1.06
TCF4-285ENST00000637239 GORABQ5T7V8 394 aa8.42□□□□□ -1.06
TCF4-285ENST00000637239 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
TCF4-285ENST00000637239 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
TCF4-285ENST00000637239 MIER1Q8N108 512 aa8.42□□□□□ -1.06
TCF4-285ENST00000637239 TERF2IPQ9NYB0 399 aa8.42□□□□□ -1.06
TCF4-285ENST00000637239 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
TCF4-285ENST00000637239 UACAQ9BZF9 1416 aa8.41□□□□□ -1.06
TCF4-285ENST00000637239 FRAT2O75474 233 aaPredicted RBP8.41□□□□□ -1.06
TCF4-285ENST00000637239 CCDC18Q5T9S5 1454 aa8.41□□□□□ -1.06
TCF4-285ENST00000637239 FGD5Q6ZNL6 1462 aa8.41□□□□□ -1.06
TCF4-285ENST00000637239 PTMAP06454 111 aaKnown RBP8.41□□□□□ -1.06
TCF4-285ENST00000637239 GOLGA6L6A8MZA4 724 aa8.4□□□□□ -1.06
TCF4-285ENST00000637239 CHMP3Q9Y3E7 222 aa8.4□□□□□ -1.06
TCF4-285ENST00000637239 C1orf141Q5JVX7 400 aa8.4□□□□□ -1.06
TCF4-285ENST00000637239 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
TCF4-285ENST00000637239 GNL2Q13823 731 aaKnown RBP8.4□□□□□ -1.06
TCF4-285ENST00000637239 DNTTIP2Q5QJE6 756 aaKnown RBP8.4□□□□□ -1.07
TCF4-285ENST00000637239 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.07
TCF4-285ENST00000637239 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
TCF4-285ENST00000637239 GPATCH3Q96I76 525 aa8.39□□□□□ -1.07
TCF4-285ENST00000637239 MCCP23508 829 aa8.39□□□□□ -1.07
TCF4-285ENST00000637239 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
TCF4-285ENST00000637239 PSME1Q06323 249 aa8.38□□□□□ -1.07
TCF4-285ENST00000637239 CC2D1BQ5T0F9 858 aaKnown RBP8.38□□□□□ -1.07
TCF4-285ENST00000637239 AMOTL1Q8IY63 956 aa8.38□□□□□ -1.07
TCF4-285ENST00000637239 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
TCF4-285ENST00000637239 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
TCF4-285ENST00000637239 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
TCF4-285ENST00000637239 STK31Q9BXU1 1019 aa8.36□□□□□ -1.07
TCF4-285ENST00000637239 DNMBPQ6XZF7 1577 aa8.36□□□□□ -1.07
TCF4-285ENST00000637239 SYTL4Q96C24 671 aaPredicted RBP8.35□□□□□ -1.07
TCF4-285ENST00000637239 LMOD3Q0VAK6 560 aa8.35□□□□□ -1.07
TCF4-285ENST00000637239 TCEAL9Q9UHQ7 104 aa8.35□□□□□ -1.07
TCF4-285ENST00000637239 TTC5Q8N0Z6 440 aa8.35□□□□□ -1.07
TCF4-285ENST00000637239 LTV1Q96GA3 475 aaPredicted RBP8.35□□□□□ -1.07
TCF4-285ENST00000637239 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
TCF4-285ENST00000637239 HNRNPMP52272 730 aaKnown RBP eCLIP8.34□□□□□ -1.077e-6■■■□□ 17
TCF4-285ENST00000637239 SUPT16HQ9Y5B9 1047 aaKnown RBP8.34□□□□□ -1.07
TCF4-285ENST00000637239 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
TCF4-285ENST00000637239 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
TCF4-285ENST00000637239 ROCK2O75116 1388 aaKnown RBP8.34□□□□□ -1.07
TCF4-285ENST00000637239 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.07
TCF4-285ENST00000637239 TOPBP1Q92547 1522 aa8.34□□□□□ -1.07
TCF4-285ENST00000637239 VPS53Q5VIR6 699 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms