RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
CLN8-212ENST00000637083 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
CLN8-212ENST00000637083 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.35
CLN8-212ENST00000637083 MPHOSPH9Q99550 1183 aa17.2■□□□□ 0.34
CLN8-212ENST00000637083 ABCA8O94911 1581 aa17.2■□□□□ 0.34
CLN8-212ENST00000637083 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
CLN8-212ENST00000637083 GPATCH8Q9UKJ3 1502 aaKnown RBP17.18■□□□□ 0.34
CLN8-212ENST00000637083 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
CLN8-212ENST00000637083 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
CLN8-212ENST00000637083 KDM6BO15054 1643 aa17.16■□□□□ 0.34
CLN8-212ENST00000637083 KIF14Q15058 1648 aa17.15■□□□□ 0.34
CLN8-212ENST00000637083 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
CLN8-212ENST00000637083 ADGBQ8N7X0 1667 aa17.14■□□□□ 0.33
CLN8-212ENST00000637083 DENND4BO75064 1496 aaPredicted RBP17.14■□□□□ 0.33
CLN8-212ENST00000637083 ADGRL2O95490 1459 aa17.13■□□□□ 0.33
CLN8-212ENST00000637083 PTPRGP23470 1445 aa17.12■□□□□ 0.33
CLN8-212ENST00000637083 ATP10BO94823 1461 aa17.12■□□□□ 0.33
CLN8-212ENST00000637083 KDM5BQ9UGL1 1544 aa17.11■□□□□ 0.33
CLN8-212ENST00000637083 ANKRD30AQ9BXX3 1397 aa17.11■□□□□ 0.33
CLN8-212ENST00000637083 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
CLN8-212ENST00000637083 CROCC2H7BZ55 1655 aa17.1■□□□□ 0.33
CLN8-212ENST00000637083 ANP32CO43423 234 aa17.09■□□□□ 0.33
CLN8-212ENST00000637083 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
CLN8-212ENST00000637083 ABCC10Q5T3U5 1492 aa17.08■□□□□ 0.33
CLN8-212ENST00000637083 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.33
CLN8-212ENST00000637083 CCER2I3L3R5 266 aa17.08■□□□□ 0.33
CLN8-212ENST00000637083 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.33
CLN8-212ENST00000637083 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.32
CLN8-212ENST00000637083 SHANK2Q9UPX8 1470 aa17.08■□□□□ 0.32
CLN8-212ENST00000637083 CDC42BPAQ5VT25 1732 aa17.05■□□□□ 0.32
CLN8-212ENST00000637083 EIF4G2P78344 907 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLN8-212ENST00000637083 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
CLN8-212ENST00000637083 CHD1O14646 1710 aa17.04■□□□□ 0.32
CLN8-212ENST00000637083 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
CLN8-212ENST00000637083 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
CLN8-212ENST00000637083 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
CLN8-212ENST00000637083 SHROOM2Q13796 1616 aa17.02■□□□□ 0.32
CLN8-212ENST00000637083 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
CLN8-212ENST00000637083 FOXD1Q16676 465 aa17.01■□□□□ 0.31
CLN8-212ENST00000637083 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
CLN8-212ENST00000637083 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
CLN8-212ENST00000637083 PZPP20742 1482 aa17■□□□□ 0.31
CLN8-212ENST00000637083 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
CLN8-212ENST00000637083 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
CLN8-212ENST00000637083 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
CLN8-212ENST00000637083 TEX14Q8IWB6 1497 aa16.97■□□□□ 0.31
CLN8-212ENST00000637083 PREX2Q70Z35 1606 aa16.95■□□□□ 0.3
CLN8-212ENST00000637083 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
CLN8-212ENST00000637083 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
CLN8-212ENST00000637083 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.36e-8■□□□□ 11
CLN8-212ENST00000637083 ABCC2Q92887 1545 aa16.93■□□□□ 0.3
CLN8-212ENST00000637083 PKD2Q13563 968 aa16.92■□□□□ 0.3
CLN8-212ENST00000637083 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
CLN8-212ENST00000637083 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
CLN8-212ENST00000637083 KCNH8Q96L42 1107 aa16.91■□□□□ 0.3
CLN8-212ENST00000637083 NUP155O75694 1391 aa16.91■□□□□ 0.3
CLN8-212ENST00000637083 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
CLN8-212ENST00000637083 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
CLN8-212ENST00000637083 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
CLN8-212ENST00000637083 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.29
CLN8-212ENST00000637083 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
CLN8-212ENST00000637083 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
CLN8-212ENST00000637083 MAST1Q9Y2H9 1570 aa16.87■□□□□ 0.29
CLN8-212ENST00000637083 CNTLNQ9NXG0 1405 aa16.87■□□□□ 0.29
CLN8-212ENST00000637083 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
CLN8-212ENST00000637083 UHRF1BP1LA0JNW5 1464 aa16.86■□□□□ 0.29
CLN8-212ENST00000637083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.295e-6■□□□□ 9.5
CLN8-212ENST00000637083 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
CLN8-212ENST00000637083 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
CLN8-212ENST00000637083 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
CLN8-212ENST00000637083 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
CLN8-212ENST00000637083 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.29
CLN8-212ENST00000637083 TTC37Q6PGP7 1564 aa16.82■□□□□ 0.28
CLN8-212ENST00000637083 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
CLN8-212ENST00000637083 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
CLN8-212ENST00000637083 UHRF1BP1Q6BDS2 1440 aa16.82■□□□□ 0.28
CLN8-212ENST00000637083 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
CLN8-212ENST00000637083 ARID4BQ4LE39 1312 aaPredicted RBP16.8■□□□□ 0.28
CLN8-212ENST00000637083 PLXNC1O60486 1568 aa16.79■□□□□ 0.28
CLN8-212ENST00000637083 PLCH2O75038 1416 aa16.78■□□□□ 0.28
CLN8-212ENST00000637083 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
CLN8-212ENST00000637083 ZCCHC11Q5TAX3 1644 aaKnown RBP16.77■□□□□ 0.28
CLN8-212ENST00000637083 FAM135AQ9P2D6 1515 aa16.77■□□□□ 0.28
CLN8-212ENST00000637083 UNC13BO14795 1591 aa16.76■□□□□ 0.27
CLN8-212ENST00000637083 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
CLN8-212ENST00000637083 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
CLN8-212ENST00000637083 USP47Q96K76 1375 aa16.75■□□□□ 0.27
CLN8-212ENST00000637083 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
CLN8-212ENST00000637083 C11orf95C9JLR9 678 aaPredicted RBP16.74■□□□□ 0.27
CLN8-212ENST00000637083 NEFLP07196 543 aa16.74■□□□□ 0.27
CLN8-212ENST00000637083 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
CLN8-212ENST00000637083 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
CLN8-212ENST00000637083 ERBINQ96RT1 1412 aa16.73■□□□□ 0.27
CLN8-212ENST00000637083 ARAP3Q8WWN8 1544 aa16.72■□□□□ 0.27
CLN8-212ENST00000637083 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
CLN8-212ENST00000637083 KDM5CP41229 1560 aa16.72■□□□□ 0.27
CLN8-212ENST00000637083 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
CLN8-212ENST00000637083 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
CLN8-212ENST00000637083 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
CLN8-212ENST00000637083 ABCC1P33527 1531 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms