RNA–Protein interactions for RNA: ENST00000636959.1

KCNQ2-233, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-233	ENST00000636959	MYO5C	Q9NQX4	1742 aa		10.37	□□□□□ -0.75
KCNQ2-233	ENST00000636959	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
KCNQ2-233	ENST00000636959	MAGI2	Q86UL8	1455 aa		10.36	□□□□□ -0.75
KCNQ2-233	ENST00000636959	UHRF1BP1	Q6BDS2	1440 aa		10.36	□□□□□ -0.75
KCNQ2-233	ENST00000636959	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.36	□□□□□ -0.75
KCNQ2-233	ENST00000636959	DMRT2	Q9Y5R5	561 aa		10.35	□□□□□ -0.75
KCNQ2-233	ENST00000636959	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.34	□□□□□ -0.75
KCNQ2-233	ENST00000636959	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.34	□□□□□ -0.75
KCNQ2-233	ENST00000636959	NUP153	P49790	1475 aa	Known RBP	10.34	□□□□□ -0.75
KCNQ2-233	ENST00000636959	C9orf84	Q5VXU9	1444 aa		10.33	□□□□□ -0.76
KCNQ2-233	ENST00000636959	PTPRT	O14522	1441 aa		10.33	□□□□□ -0.76
KCNQ2-233	ENST00000636959	MED1	Q15648	1581 aa	Predicted RBP	10.32	□□□□□ -0.76
KCNQ2-233	ENST00000636959	P3H3	Q8IVL6	736 aa		10.32	□□□□□ -0.76
KCNQ2-233	ENST00000636959	PRX	Q9BXM0	1461 aa		10.3	□□□□□ -0.76
KCNQ2-233	ENST00000636959	ATP10A	O60312	1499 aa		10.3	□□□□□ -0.76
KCNQ2-233	ENST00000636959	CEBPA	P49715	358 aa	Predicted RBP	10.29	□□□□□ -0.76
KCNQ2-233	ENST00000636959	DIP2C	Q9Y2E4	1556 aa		10.29	□□□□□ -0.76
KCNQ2-233	ENST00000636959	ABCA6	Q8N139	1617 aa		10.29	□□□□□ -0.76
KCNQ2-233	ENST00000636959	CAMSAP1	Q5T5Y3	1602 aa		10.27	□□□□□ -0.77
KCNQ2-233	ENST00000636959	ZNF142	P52746	1687 aa	Predicted RBP	10.27	□□□□□ -0.77
KCNQ2-233	ENST00000636959	KDM5C	P41229	1560 aa		10.26	□□□□□ -0.77
KCNQ2-233	ENST00000636959	RERE	Q9P2R6	1566 aa		10.26	□□□□□ -0.77
KCNQ2-233	ENST00000636959	NCOA1	Q15788	1441 aa		10.26	□□□□□ -0.77
KCNQ2-233	ENST00000636959	SCAPER	Q9BY12	1400 aa		10.26	□□□□□ -0.77
KCNQ2-233	ENST00000636959	MROH2A	A6NES4	1674 aa		10.26	□□□□□ -0.77
KCNQ2-233	ENST00000636959	MYO3A	Q8NEV4	1616 aa		10.25	□□□□□ -0.77
KCNQ2-233	ENST00000636959	ZNF518A	Q6AHZ1	1483 aa		10.24	□□□□□ -0.77
KCNQ2-233	ENST00000636959	CDK13	Q14004	1512 aa	Known RBP	10.24	□□□□□ -0.77
KCNQ2-233	ENST00000636959	POLR1A	O95602	1720 aa	Predicted RBP	10.24	□□□□□ -0.77
KCNQ2-233	ENST00000636959	KIF14	Q15058	1648 aa		10.23	□□□□□ -0.77
KCNQ2-233	ENST00000636959	ITSN2	Q9NZM3	1697 aa		10.23	□□□□□ -0.77
KCNQ2-233	ENST00000636959	PLEKHD1	A6NEE1	506 aa		10.23	□□□□□ -0.77
KCNQ2-233	ENST00000636959	CDC42BPB	Q9Y5S2	1711 aa		10.21	□□□□□ -0.77
KCNQ2-233	ENST00000636959	UBAP1L	F5GYI3	381 aa		10.21	□□□□□ -0.77
KCNQ2-233	ENST00000636959	PLCH2	O75038	1416 aa		10.21	□□□□□ -0.78
KCNQ2-233	ENST00000636959	CLTC	Q00610	1675 aa	Known RBP	10.21	□□□□□ -0.78
KCNQ2-233	ENST00000636959	AGL	P35573	1532 aa		10.2	□□□□□ -0.78
KCNQ2-233	ENST00000636959	ARHGAP5	Q13017	1502 aa		10.2	□□□□□ -0.78
KCNQ2-233	ENST00000636959	TRAPPC8	Q9Y2L5	1435 aa		10.19	□□□□□ -0.78
KCNQ2-233	ENST00000636959	KIDINS220	Q9ULH0	1771 aa		10.19	□□□□□ -0.78
KCNQ2-233	ENST00000636959	LRRIQ1	Q96JM4	1722 aa		10.19	□□□□□ -0.78
KCNQ2-233	ENST00000636959	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.18	□□□□□ -0.78
KCNQ2-233	ENST00000636959	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.18	□□□□□ -0.78
KCNQ2-233	ENST00000636959	PREX2	Q70Z35	1606 aa		10.18	□□□□□ -0.78
KCNQ2-233	ENST00000636959	ESF1	Q9H501	851 aa	Known RBP	10.17	□□□□□ -0.78
KCNQ2-233	ENST00000636959	MYT1L	Q9UL68	1186 aa		10.17	□□□□□ -0.78
KCNQ2-233	ENST00000636959	CNTLN	Q9NXG0	1405 aa		10.16	□□□□□ -0.78
KCNQ2-233	ENST00000636959	SCAF1	Q9H7N4	1312 aa	Known RBP	10.16	□□□□□ -0.78
KCNQ2-233	ENST00000636959	RANGAP1	P46060	587 aa	Predicted RBP	10.16	□□□□□ -0.78
KCNQ2-233	ENST00000636959	ABCC1	P33527	1531 aa		10.16	□□□□□ -0.78
KCNQ2-233	ENST00000636959	PLA2R1	Q13018	1463 aa		10.16	□□□□□ -0.78
KCNQ2-233	ENST00000636959	PHF23	Q9BUL5	403 aa	Predicted RBP	10.15	□□□□□ -0.78
KCNQ2-233	ENST00000636959	NPAT	Q14207	1427 aa		10.15	□□□□□ -0.79
KCNQ2-233	ENST00000636959	CDC42BPA	Q5VT25	1732 aa		10.13	□□□□□ -0.79
KCNQ2-233	ENST00000636959	TCOF1	Q13428	1488 aa	Known RBP	10.13	□□□□□ -0.79
KCNQ2-233	ENST00000636959	MLH3	Q9UHC1	1453 aa		10.13	□□□□□ -0.79
KCNQ2-233	ENST00000636959	CPS1	P31327	1500 aa		10.12	□□□□□ -0.79
KCNQ2-233	ENST00000636959	NCKAP5L	Q9HCH0	1330 aa		10.12	□□□□□ -0.79
KCNQ2-233	ENST00000636959	HSPA1L	P34931	641 aa		10.12	□□□□□ -0.79
KCNQ2-233	ENST00000636959	EFCAB2	Q5VUJ9	269 aa		10.12	□□□□□ -0.79
KCNQ2-233	ENST00000636959	PIP4K2B	P78356	416 aa		10.11	□□□□□ -0.79
KCNQ2-233	ENST00000636959	NEURL4	Q96JN8	1562 aa		10.1	□□□□□ -0.79
KCNQ2-233	ENST00000636959	AFAP1	Q8N556	730 aa		10.1	□□□□□ -0.79
KCNQ2-233	ENST00000636959	DNMT1	P26358	1616 aa	Known RBP	10.1	□□□□□ -0.79
KCNQ2-233	ENST00000636959	SETD1A	O15047	1707 aa	Known RBP	10.1	□□□□□ -0.79
KCNQ2-233	ENST00000636959	CLIP1	P30622	1438 aa		10.09	□□□□□ -0.79
KCNQ2-233	ENST00000636959	RNF17	Q9BXT8	1623 aa	Known RBP	10.09	□□□□□ -0.79
KCNQ2-233	ENST00000636959	ALK	Q9UM73	1620 aa		10.08	□□□□□ -0.8
KCNQ2-233	ENST00000636959	PKD2	Q13563	968 aa		10.08	□□□□□ -0.8
KCNQ2-233	ENST00000636959	SAMD9L	Q8IVG5	1584 aa		10.08	□□□□□ -0.8
KCNQ2-233	ENST00000636959	ADGB	Q8N7X0	1667 aa		10.07	□□□□□ -0.8
KCNQ2-233	ENST00000636959	SYNM	O15061	1565 aa		10.07	□□□□□ -0.8
KCNQ2-233	ENST00000636959	PLXNC1	O60486	1568 aa		10.07	□□□□□ -0.8
KCNQ2-233	ENST00000636959	PPP6R1	Q9UPN7	881 aa		10.07	□□□□□ -0.8
KCNQ2-233	ENST00000636959	TRO	Q12816	1431 aa	Predicted RBP	10.07	□□□□□ -0.8
KCNQ2-233	ENST00000636959	INO80	Q9ULG1	1556 aa	Predicted RBP	10.06	□□□□□ -0.8
KCNQ2-233	ENST00000636959	TOM1	O60784	492 aa		10.06	□□□□□ -0.8
KCNQ2-233	ENST00000636959	STRCP1	A6NGW2	1772 aa		10.06	□□□□□ -0.8
KCNQ2-233	ENST00000636959	ZMYM3	Q14202	1370 aa		10.05	□□□□□ -0.8
KCNQ2-233	ENST00000636959	ATP7A	Q04656	1500 aa		10.05	□□□□□ -0.8
KCNQ2-233	ENST00000636959	SYCP2	Q9BX26	1530 aa		10.05	□□□□□ -0.8
KCNQ2-233	ENST00000636959	IQGAP1	P46940	1657 aa		10.05	□□□□□ -0.8
KCNQ2-233	ENST00000636959	VWDE	Q8N2E2	1590 aa		10.05	□□□□□ -0.8
KCNQ2-233	ENST00000636959	SHANK2	Q9UPX8	1470 aa		10.04	□□□□□ -0.8
KCNQ2-233	ENST00000636959	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.04	□□□□□ -0.8
KCNQ2-233	ENST00000636959	PTPRK	Q15262	1439 aa		10.04	□□□□□ -0.8
KCNQ2-233	ENST00000636959	FMN1	Q68DA7	1419 aa		10.04	□□□□□ -0.8
KCNQ2-233	ENST00000636959	A2ML1	A8K2U0	1454 aa		10.04	□□□□□ -0.8
KCNQ2-233	ENST00000636959	CSRNP3	Q8WYN3	585 aa		10.03	□□□□□ -0.8
KCNQ2-233	ENST00000636959	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.03	□□□□□ -0.8
KCNQ2-233	ENST00000636959	DEPDC5	O75140	1603 aa		10.01	□□□□□ -0.81
KCNQ2-233	ENST00000636959	XIRP1	Q702N8	1843 aa	Known RBP	10.01	□□□□□ -0.81
KCNQ2-233	ENST00000636959	SENP3	Q9H4L4	574 aa	Predicted RBP	10.01	□□□□□ -0.81
KCNQ2-233	ENST00000636959	EEA1	Q15075	1411 aa		10	□□□□□ -0.81
KCNQ2-233	ENST00000636959	A2M	P01023	1474 aa		9.99	□□□□□ -0.81
KCNQ2-233	ENST00000636959	ARHGAP35	Q9NRY4	1499 aa		9.98	□□□□□ -0.81
KCNQ2-233	ENST00000636959	ZC3H13	Q5T200	1668 aa	Known RBP	9.97	□□□□□ -0.81
KCNQ2-233	ENST00000636959	CCDC18	Q5T9S5	1454 aa		9.97	□□□□□ -0.81
KCNQ2-233	ENST00000636959	SPAG9	O60271	1321 aa	Known RBP	9.95	□□□□□ -0.82
KCNQ2-233	ENST00000636959	LRRC7	Q96NW7	1537 aa		9.95	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms