RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
SMARCA2-254ENST00000636903 TTC37Q6PGP7 1564 aa20.15■□□□□ 0.82
SMARCA2-254ENST00000636903 HFM1A2PYH4 1435 aa20.14■□□□□ 0.82
SMARCA2-254ENST00000636903 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
SMARCA2-254ENST00000636903 KDM6BO15054 1643 aa20.13■□□□□ 0.81
SMARCA2-254ENST00000636903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMARCA2-254ENST00000636903 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
SMARCA2-254ENST00000636903 ITSN2Q9NZM3 1697 aa20.11■□□□□ 0.81
SMARCA2-254ENST00000636903 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
SMARCA2-254ENST00000636903 MAPKBP1O60336 1514 aa20.08■□□□□ 0.81
SMARCA2-254ENST00000636903 CDC42BPBQ9Y5S2 1711 aa20.08■□□□□ 0.81
SMARCA2-254ENST00000636903 DNMT1P26358 1616 aaKnown RBP20.08■□□□□ 0.81
SMARCA2-254ENST00000636903 NEUROD1Q13562 356 aa20.08■□□□□ 0.8
SMARCA2-254ENST00000636903 TRIM52Q96A61 297 aa20.08■□□□□ 0.8
SMARCA2-254ENST00000636903 ARHGAP5Q13017 1502 aa20.05■□□□□ 0.8
SMARCA2-254ENST00000636903 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
SMARCA2-254ENST00000636903 FOXD1Q16676 465 aa20.03■□□□□ 0.8
SMARCA2-254ENST00000636903 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
SMARCA2-254ENST00000636903 AKNAQ7Z591 1439 aa20.02■□□□□ 0.8
SMARCA2-254ENST00000636903 PREX2Q70Z35 1606 aa20.02■□□□□ 0.79
SMARCA2-254ENST00000636903 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMARCA2-254ENST00000636903 WDR7Q9Y4E6 1490 aa20.01■□□□□ 0.79
SMARCA2-254ENST00000636903 NCOA1Q15788 1441 aa19.99■□□□□ 0.79
SMARCA2-254ENST00000636903 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
SMARCA2-254ENST00000636903 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
SMARCA2-254ENST00000636903 SYCP2Q9BX26 1530 aa19.98■□□□□ 0.79
SMARCA2-254ENST00000636903 TSPY4P0CV99 314 aa19.98■□□□□ 0.79
SMARCA2-254ENST00000636903 TSPY10P0CW01 314 aa19.98■□□□□ 0.79
SMARCA2-254ENST00000636903 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
SMARCA2-254ENST00000636903 MYO5CQ9NQX4 1742 aa19.97■□□□□ 0.79
SMARCA2-254ENST00000636903 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
SMARCA2-254ENST00000636903 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
SMARCA2-254ENST00000636903 ROCK1Q13464 1354 aa19.95■□□□□ 0.78
SMARCA2-254ENST00000636903 PLCH2O75038 1416 aa19.95■□□□□ 0.78
SMARCA2-254ENST00000636903 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
SMARCA2-254ENST00000636903 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
SMARCA2-254ENST00000636903 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
SMARCA2-254ENST00000636903 CROCC2H7BZ55 1655 aa19.93■□□□□ 0.78
SMARCA2-254ENST00000636903 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
SMARCA2-254ENST00000636903 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
SMARCA2-254ENST00000636903 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
SMARCA2-254ENST00000636903 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
SMARCA2-254ENST00000636903 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
SMARCA2-254ENST00000636903 CCDC141Q6ZP82 1450 aa19.89■□□□□ 0.77
SMARCA2-254ENST00000636903 TRAPPC8Q9Y2L5 1435 aa19.88■□□□□ 0.77
SMARCA2-254ENST00000636903 KIF15Q9NS87 1388 aa19.88■□□□□ 0.77
SMARCA2-254ENST00000636903 ANKRD50Q9ULJ7 1429 aa19.87■□□□□ 0.77
SMARCA2-254ENST00000636903 ADGBQ8N7X0 1667 aa19.87■□□□□ 0.77
SMARCA2-254ENST00000636903 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
SMARCA2-254ENST00000636903 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
SMARCA2-254ENST00000636903 FANCAO15360 1455 aa19.85■□□□□ 0.77
SMARCA2-254ENST00000636903 ARHGEF5Q12774 1597 aa19.85■□□□□ 0.77
SMARCA2-254ENST00000636903 ABCA9Q8IUA7 1624 aa19.83■□□□□ 0.76
SMARCA2-254ENST00000636903 SHANK2Q9UPX8 1470 aa19.82■□□□□ 0.76
SMARCA2-254ENST00000636903 MYT1LQ9UL68 1186 aa19.81■□□□□ 0.76
SMARCA2-254ENST00000636903 ABCC1P33527 1531 aa19.81■□□□□ 0.76
SMARCA2-254ENST00000636903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMARCA2-254ENST00000636903 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
SMARCA2-254ENST00000636903 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
SMARCA2-254ENST00000636903 RSPH4AQ5TD94 716 aa19.79■□□□□ 0.76
SMARCA2-254ENST00000636903 NUP155O75694 1391 aa19.79■□□□□ 0.76
SMARCA2-254ENST00000636903 PZPP20742 1482 aa19.78■□□□□ 0.76
SMARCA2-254ENST00000636903 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
SMARCA2-254ENST00000636903 ZNF316A6NFI3 1004 aaPredicted RBP19.77■□□□□ 0.75
SMARCA2-254ENST00000636903 PKD2Q13563 968 aa19.77■□□□□ 0.75
SMARCA2-254ENST00000636903 SPAG9O60271 1321 aaKnown RBP19.76■□□□□ 0.75
SMARCA2-254ENST00000636903 ADGRL1O94910 1474 aa19.76■□□□□ 0.75
SMARCA2-254ENST00000636903 PLEKHH2Q8IVE3 1493 aa19.76■□□□□ 0.75
SMARCA2-254ENST00000636903 TONSLQ96HA7 1378 aa19.73■□□□□ 0.75
SMARCA2-254ENST00000636903 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
SMARCA2-254ENST00000636903 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
SMARCA2-254ENST00000636903 RAPGEF3O95398 923 aa19.71■□□□□ 0.75
SMARCA2-254ENST00000636903 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
SMARCA2-254ENST00000636903 ARAP3Q8WWN8 1544 aa19.7■□□□□ 0.74
SMARCA2-254ENST00000636903 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
SMARCA2-254ENST00000636903 MAST1Q9Y2H9 1570 aa19.67■□□□□ 0.74
SMARCA2-254ENST00000636903 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
SMARCA2-254ENST00000636903 L3MBTL2Q969R5 705 aa19.65■□□□□ 0.74
SMARCA2-254ENST00000636903 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
SMARCA2-254ENST00000636903 ACIN1Q9UKV3 1341 aaKnown RBP19.64■□□□□ 0.73
SMARCA2-254ENST00000636903 PLXNC1O60486 1568 aa19.63■□□□□ 0.73
SMARCA2-254ENST00000636903 TSPOAP1O95153 1857 aa19.62■□□□□ 0.73
SMARCA2-254ENST00000636903 ATP7AQ04656 1500 aa19.61■□□□□ 0.73
SMARCA2-254ENST00000636903 KIF3BO15066 747 aa19.61■□□□□ 0.73
SMARCA2-254ENST00000636903 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
SMARCA2-254ENST00000636903 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
SMARCA2-254ENST00000636903 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.73
SMARCA2-254ENST00000636903 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
SMARCA2-254ENST00000636903 RPRD2Q5VT52 1461 aaKnown RBP19.57■□□□□ 0.72
SMARCA2-254ENST00000636903 RTEL1-TNFRSF6BF6WH68 1400 aa19.57■□□□□ 0.72
SMARCA2-254ENST00000636903 ZNF518AQ6AHZ1 1483 aa19.56■□□□□ 0.72
SMARCA2-254ENST00000636903 POGZQ7Z3K3 1410 aa19.56■□□□□ 0.72
SMARCA2-254ENST00000636903 ZNF326Q5BKZ1 582 aaKnown RBP19.56■□□□□ 0.72
SMARCA2-254ENST00000636903 DIP2BQ9P265 1576 aa19.56■□□□□ 0.72
SMARCA2-254ENST00000636903 KIDINS220Q9ULH0 1771 aa19.56■□□□□ 0.72
SMARCA2-254ENST00000636903 MAP3K4Q9Y6R4 1608 aa19.56■□□□□ 0.72
SMARCA2-254ENST00000636903 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
SMARCA2-254ENST00000636903 NBPF8Q3BBV2 869 aa19.54■□□□□ 0.72
SMARCA2-254ENST00000636903 KDM5DQ9BY66 1539 aa19.54■□□□□ 0.72
SMARCA2-254ENST00000636903 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms