RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	ANP32E	Q9BTT0	268 aa		3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	LMOD2	Q6P5Q4	547 aa		3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	DIEXF	Q68CQ4	756 aa	Known RBP	3.65	□□□□□ -1.82
CACNB4-238	ENST00000636901	KANK1	Q14678	1352 aa		3.65	□□□□□ -1.82
CACNB4-238	ENST00000636901	EIF4G2	P78344	907 aa	Known RBP eCLIP	3.65	□□□□□ -1.82
CACNB4-238	ENST00000636901	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	3.65	□□□□□ -1.82
CACNB4-238	ENST00000636901	ASCC3	Q8N3C0	2202 aa	Known RBP	3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	CLIP1	P30622	1438 aa		3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	SDK2	Q58EX2	2172 aa		3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	PHLDB1	Q86UU1	1377 aa		3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	NCAPD3	P42695	1498 aa		3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	MRC2	Q9UBG0	1479 aa		3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	WRN	Q14191	1432 aa	Predicted RBP eCLIP	3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	MEX3C	Q5U5Q3	659 aa	Known RBP	3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	PLCD3	Q8N3E9	789 aa		3.65	□□□□□ -1.83
CACNB4-238	ENST00000636901	RSPH4A	Q5TD94	716 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	SPRYD3	Q8NCJ5	442 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	CHGA	P10645	457 aa	Known RBP	3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	CBX1	P83916	185 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	ZNF219	Q9P2Y4	722 aa	Predicted RBP	3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	RP1	P56715	2156 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	RBM19	Q9Y4C8	960 aa	Known RBP	3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	RTTN	Q86VV8	2226 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	EFCAB2	Q5VUJ9	269 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	IFT140	Q96RY7	1462 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	STAC3	Q96MF2	364 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	GOLGA3	Q08378	1498 aa		3.64	□□□□□ -1.83
CACNB4-238	ENST00000636901	SPTB	P11277	2137 aa		3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	NOC3L	Q8WTT2	800 aa	Known RBP	3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	CCDC9	Q9Y3X0	531 aa	Known RBP	3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	KIF27	Q86VH2	1401 aa		3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	CEP162	Q5TB80	1403 aa		3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	FAM69C	Q0P6D2	419 aa		3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	CCDC97	Q96F63	343 aa	Predicted RBP	3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	CACNA1C	Q13936	2221 aa		3.63	□□□□□ -1.83
CACNB4-238	ENST00000636901	TRIOBP	Q9H2D6	2365 aa		3.62	□□□□□ -1.83
CACNB4-238	ENST00000636901	TPRN	Q4KMQ1	711 aa		3.62	□□□□□ -1.83
CACNB4-238	ENST00000636901	PAK3	O75914	559 aa	Predicted RBP	3.62	□□□□□ -1.83
CACNB4-238	ENST00000636901	TEX14	Q8IWB6	1497 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	SPDYE4	A6NLX3	237 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	GSE1	Q14687	1217 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	ZNF326	Q5BKZ1	582 aa	Known RBP	3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	TOM1	O60784	492 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	SVIL	O95425	2214 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	CACNA1D	Q01668	2161 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	EIF4G1	Q04637	1599 aa	Known RBP	3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	EEA1	Q15075	1411 aa		3.61	□□□□□ -1.83
CACNB4-238	ENST00000636901	ZNF710	Q8N1W2	664 aa		3.6	□□□□□ -1.83
CACNB4-238	ENST00000636901	CCAR1	Q8IX12	1150 aa	Known RBP	3.6	□□□□□ -1.83
CACNB4-238	ENST00000636901	EIF5B	O60841	1220 aa	Known RBP	3.6	□□□□□ -1.83
CACNB4-238	ENST00000636901	KIAA2012	Q0VF49	1180 aa		3.6	□□□□□ -1.83
CACNB4-238	ENST00000636901	KCNH8	Q96L42	1107 aa		3.6	□□□□□ -1.83
CACNB4-238	ENST00000636901	SOGA1	O94964	1423 aa		3.6	□□□□□ -1.83
CACNB4-238	ENST00000636901	TMEM87A	Q8NBN3	555 aa		3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	LAMC3	Q9Y6N6	1575 aa		3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	CUL9	Q8IWT3	2517 aa		3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	C11orf95	C9JLR9	678 aa	Predicted RBP	3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	CEP89	Q96ST8	783 aa		3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	PPP1R1B	Q9UD71	204 aa	Predicted RBP	3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901		A0A0U1RQG5	324 aa	Predicted RBP	3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	CHMP4A	Q9BY43	222 aa		3.59	□□□□□ -1.83
CACNB4-238	ENST00000636901	PROM2	Q8N271	834 aa		3.59	□□□□□ -1.84
CACNB4-238	ENST00000636901	TRIM52	Q96A61	297 aa		3.59	□□□□□ -1.84
CACNB4-238	ENST00000636901	IPO9	Q96P70	1041 aa	Known RBP	3.59	□□□□□ -1.84
CACNB4-238	ENST00000636901	SEPT11	Q9NVA2	429 aa	Known RBP	3.59	□□□□□ -1.84
CACNB4-238	ENST00000636901	SPTBN1	Q01082	2364 aa	Known RBP	3.59	□□□□□ -1.84
CACNB4-238	ENST00000636901	NAP1L2	Q9ULW6	460 aa	Predicted RBP	3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	HMGXB3	Q12766	1538 aa		3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	NEUROD1	Q13562	356 aa		3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	PTPRG	P23470	1445 aa		3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	PNN	Q9H307	717 aa	Known RBP	3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	PPM1G	O15355	546 aa	Predicted RBP	3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	VPS53	Q5VIR6	699 aa		3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	ZEB1	P37275	1124 aa	Predicted RBP	3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	CFAP65	Q6ZU64	1925 aa	Known RBP	3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	FANCD2	Q9BXW9	1451 aa		3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	TCEAL9	Q9UHQ7	104 aa		3.58	□□□□□ -1.84
CACNB4-238	ENST00000636901	NOP2	P46087	812 aa	Known RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	KIAA0100	Q14667	2235 aa	Known RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	CC2D2A	Q9P2K1	1620 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	PDCL3	Q9H2J4	239 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	ZNF777	Q9ULD5	760 aa	Predicted RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	ABCA1	O95477	2261 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	CACNA1I	Q9P0X4	2223 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	CHAF1A	Q13111	956 aa	Predicted RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	ATAD2B	Q9ULI0	1458 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	RFX1	P22670	979 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	FGD1	P98174	961 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	GTF3C1	Q12789	2109 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	DOCK7	Q96N67	2140 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	APP	P05067	770 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	JPH4	Q96JJ6	628 aa		3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	UPF2	Q9HAU5	1272 aa	Known RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	WDHD1	O75717	1129 aa	Predicted RBP	3.57	□□□□□ -1.84
CACNB4-238	ENST00000636901	CTDP1	Q9Y5B0	961 aa	Predicted RBP	3.56	□□□□□ -1.84
CACNB4-238	ENST00000636901	GRIN2B	Q13224	1484 aa		3.56	□□□□□ -1.84
CACNB4-238	ENST00000636901	ZNF407	Q9C0G0	2248 aa		3.56	□□□□□ -1.84
CACNB4-238	ENST00000636901	PRKCSH	P14314	528 aa	Predicted RBP	3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms