RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-228ENST00000636610 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-228ENST00000636610 KDM2AQ9Y2K7 1162 aa19.31■□□□□ 0.68
CACNA1A-228ENST00000636610 KIF7Q2M1P5 1343 aa19.31■□□□□ 0.68
CACNA1A-228ENST00000636610 CCDC7Q96M83 1385 aa19.3■□□□□ 0.68
CACNA1A-228ENST00000636610 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-228ENST00000636610 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
CACNA1A-228ENST00000636610 PRG4Q92954 1404 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-228ENST00000636610 CNTLNQ9NXG0 1405 aa19.27■□□□□ 0.67
CACNA1A-228ENST00000636610 MSH5O43196 834 aa19.27■□□□□ 0.67
CACNA1A-228ENST00000636610 PKD2Q13563 968 aa19.27■□□□□ 0.67
CACNA1A-228ENST00000636610 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-228ENST00000636610 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-228ENST00000636610 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
CACNA1A-228ENST00000636610 HECW1Q76N89 1606 aa19.25■□□□□ 0.67
CACNA1A-228ENST00000636610 ABCC5O15440 1437 aa19.25■□□□□ 0.67
CACNA1A-228ENST00000636610 DAPK1P53355 1430 aa19.25■□□□□ 0.67
CACNA1A-228ENST00000636610 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
CACNA1A-228ENST00000636610 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-228ENST00000636610 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-228ENST00000636610 MIA2Q96PC5 1412 aa19.2■□□□□ 0.66
CACNA1A-228ENST00000636610 WDR62O43379 1518 aa19.19■□□□□ 0.66
CACNA1A-228ENST00000636610 NCOA1Q15788 1441 aa19.19■□□□□ 0.66
CACNA1A-228ENST00000636610 NUP153P49790 1475 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-228ENST00000636610 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
CACNA1A-228ENST00000636610 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
CACNA1A-228ENST00000636610 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-228ENST00000636610 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
CACNA1A-228ENST00000636610 PPP4R2Q9NY27 417 aa19.16■□□□□ 0.66
CACNA1A-228ENST00000636610 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
CACNA1A-228ENST00000636610 GCC2Q8IWJ2 1684 aa19.14■□□□□ 0.66
CACNA1A-228ENST00000636610 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.65
CACNA1A-228ENST00000636610 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
CACNA1A-228ENST00000636610 RGL3Q3MIN7 710 aa19.13■□□□□ 0.65
CACNA1A-228ENST00000636610 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
CACNA1A-228ENST00000636610 USP47Q96K76 1375 aa19.12■□□□□ 0.65
CACNA1A-228ENST00000636610 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
CACNA1A-228ENST00000636610 AKNAQ7Z591 1439 aa19.11■□□□□ 0.65
CACNA1A-228ENST00000636610 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
CACNA1A-228ENST00000636610 TEX14Q8IWB6 1497 aa19.11■□□□□ 0.65
CACNA1A-228ENST00000636610 NUP155O75694 1391 aa19.1■□□□□ 0.65
CACNA1A-228ENST00000636610 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
CACNA1A-228ENST00000636610 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
CACNA1A-228ENST00000636610 TMC1Q8TDI8 760 aa19.1■□□□□ 0.65
CACNA1A-228ENST00000636610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
CACNA1A-228ENST00000636610 ST20-MTHFSA0A0A6YYL1 179 aa19.09■□□□□ 0.65
CACNA1A-228ENST00000636610 PLEKHD1A6NEE1 506 aa19.08■□□□□ 0.65
CACNA1A-228ENST00000636610 ROCK1Q13464 1354 aa19.07■□□□□ 0.64
CACNA1A-228ENST00000636610 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
CACNA1A-228ENST00000636610 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
CACNA1A-228ENST00000636610 PZPP20742 1482 aa19.06■□□□□ 0.64
CACNA1A-228ENST00000636610 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
CACNA1A-228ENST00000636610 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
CACNA1A-228ENST00000636610 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
CACNA1A-228ENST00000636610 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
CACNA1A-228ENST00000636610 TROQ12816 1431 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-228ENST00000636610 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
CACNA1A-228ENST00000636610 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-228ENST00000636610 DNMT1P26358 1616 aaKnown RBP19.02■□□□□ 0.63
CACNA1A-228ENST00000636610 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
CACNA1A-228ENST00000636610 ANKRD50Q9ULJ7 1429 aa19.01■□□□□ 0.63
CACNA1A-228ENST00000636610 CCDC136Q96JN2 1154 aa19.01■□□□□ 0.63
CACNA1A-228ENST00000636610 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
CACNA1A-228ENST00000636610 KIF14Q15058 1648 aa19■□□□□ 0.63
CACNA1A-228ENST00000636610 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
CACNA1A-228ENST00000636610 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
CACNA1A-228ENST00000636610 KIAA1107Q9UPP5 1409 aa19■□□□□ 0.63
CACNA1A-228ENST00000636610 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
CACNA1A-228ENST00000636610 NUDCQ9Y266 331 aa18.96■□□□□ 0.63
CACNA1A-228ENST00000636610 NBR1Q14596 966 aa18.95■□□□□ 0.62
CACNA1A-228ENST00000636610 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
CACNA1A-228ENST00000636610 PNISRQ8TF01 805 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-228ENST00000636610 CC2D1BQ5T0F9 858 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-228ENST00000636610 FANCIQ9NVI1 1328 aa18.94■□□□□ 0.62
CACNA1A-228ENST00000636610 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
CACNA1A-228ENST00000636610 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
CACNA1A-228ENST00000636610 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-228ENST00000636610 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-228ENST00000636610 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
CACNA1A-228ENST00000636610 KIF15Q9NS87 1388 aa18.9■□□□□ 0.62
CACNA1A-228ENST00000636610 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.62
CACNA1A-228ENST00000636610 PAK3O75914 559 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-228ENST00000636610 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.61
CACNA1A-228ENST00000636610 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-228ENST00000636610 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
CACNA1A-228ENST00000636610 CDCA7LQ96GN5 454 aa18.87■□□□□ 0.61
CACNA1A-228ENST00000636610 PLIN1O60240 522 aa18.85■□□□□ 0.61
CACNA1A-228ENST00000636610 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
CACNA1A-228ENST00000636610 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
CACNA1A-228ENST00000636610 ATP10BO94823 1461 aa18.84■□□□□ 0.61
CACNA1A-228ENST00000636610 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-228ENST00000636610 MBD5Q9P267 1494 aa18.83■□□□□ 0.6
CACNA1A-228ENST00000636610 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
CACNA1A-228ENST00000636610 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-228ENST00000636610 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-228ENST00000636610 KDM5CP41229 1560 aa18.78■□□□□ 0.6
CACNA1A-228ENST00000636610 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-228ENST00000636610 PANK3Q9H999 370 aa18.77■□□□□ 0.6
CACNA1A-228ENST00000636610 PTPRGP23470 1445 aa18.77■□□□□ 0.6
CACNA1A-228ENST00000636610 RCAN3Q9UKA8 241 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms