RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
PCCA-212ENST00000636420 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
PCCA-212ENST00000636420 TTC37Q6PGP7 1564 aa12.25□□□□□ -0.45
PCCA-212ENST00000636420 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
PCCA-212ENST00000636420 FHOD3Q2V2M9 1422 aa12.24□□□□□ -0.45
PCCA-212ENST00000636420 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
PCCA-212ENST00000636420 ARID3CA6NKF2 412 aa12.23□□□□□ -0.45
PCCA-212ENST00000636420 CTTNBP2Q8WZ74 1663 aa12.23□□□□□ -0.45
PCCA-212ENST00000636420 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
PCCA-212ENST00000636420 FANCAO15360 1455 aa12.22□□□□□ -0.45
PCCA-212ENST00000636420 ZMYM4Q5VZL5 1548 aa12.22□□□□□ -0.45
PCCA-212ENST00000636420 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.45
PCCA-212ENST00000636420 LTBP4Q8N2S1 1624 aa12.21□□□□□ -0.46
PCCA-212ENST00000636420 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
PCCA-212ENST00000636420 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
PCCA-212ENST00000636420 PREX1Q8TCU6 1659 aa12.2□□□□□ -0.46
PCCA-212ENST00000636420 ARHGEF12Q9NZN5 1544 aa12.19□□□□□ -0.46
PCCA-212ENST00000636420 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
PCCA-212ENST00000636420 FER1L4A9Z1Z3 1794 aa12.19□□□□□ -0.46
PCCA-212ENST00000636420 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
PCCA-212ENST00000636420 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
PCCA-212ENST00000636420 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
PCCA-212ENST00000636420 PTPRTO14522 1441 aa12.16□□□□□ -0.46
PCCA-212ENST00000636420 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
PCCA-212ENST00000636420 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
PCCA-212ENST00000636420 CEBPAP49715 358 aaPredicted RBP12.15□□□□□ -0.46
PCCA-212ENST00000636420 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
PCCA-212ENST00000636420 MLECQ14165 292 aa12.14□□□□□ -0.47
PCCA-212ENST00000636420 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
PCCA-212ENST00000636420 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
PCCA-212ENST00000636420 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
PCCA-212ENST00000636420 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
PCCA-212ENST00000636420 CENPBP07199 599 aaPredicted RBP12.11□□□□□ -0.47
PCCA-212ENST00000636420 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
PCCA-212ENST00000636420 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
PCCA-212ENST00000636420 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
PCCA-212ENST00000636420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCCA-212ENST00000636420 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
PCCA-212ENST00000636420 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
PCCA-212ENST00000636420 ATP10AO60312 1499 aa12.08□□□□□ -0.48
PCCA-212ENST00000636420 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
PCCA-212ENST00000636420 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
PCCA-212ENST00000636420 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
PCCA-212ENST00000636420 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
PCCA-212ENST00000636420 MED1Q15648 1581 aaPredicted RBP12.04□□□□□ -0.48
PCCA-212ENST00000636420 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
PCCA-212ENST00000636420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
PCCA-212ENST00000636420 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
PCCA-212ENST00000636420 C3P01024 1663 aa12.02□□□□□ -0.49
PCCA-212ENST00000636420 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
PCCA-212ENST00000636420 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
PCCA-212ENST00000636420 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
PCCA-212ENST00000636420 PLCH2O75038 1416 aa12□□□□□ -0.49
PCCA-212ENST00000636420 UBAP1LF5GYI3 381 aa12□□□□□ -0.49
PCCA-212ENST00000636420 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
PCCA-212ENST00000636420 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
PCCA-212ENST00000636420 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
PCCA-212ENST00000636420 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
PCCA-212ENST00000636420 KDM5CP41229 1560 aa11.97□□□□□ -0.49
PCCA-212ENST00000636420 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
PCCA-212ENST00000636420 CAMSAP1Q5T5Y3 1602 aa11.96□□□□□ -0.49
PCCA-212ENST00000636420 HSPA1LP34931 641 aa11.95□□□□□ -0.5
PCCA-212ENST00000636420 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
PCCA-212ENST00000636420 AGLP35573 1532 aa11.94□□□□□ -0.5
PCCA-212ENST00000636420 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
PCCA-212ENST00000636420 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
PCCA-212ENST00000636420 ZNF518AQ6AHZ1 1483 aa11.93□□□□□ -0.5
PCCA-212ENST00000636420 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
PCCA-212ENST00000636420 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
PCCA-212ENST00000636420 TCOF1Q13428 1488 aaKnown RBP11.91□□□□□ -0.5
PCCA-212ENST00000636420 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
PCCA-212ENST00000636420 NPATQ14207 1427 aa11.9□□□□□ -0.5
PCCA-212ENST00000636420 PLA2R1Q13018 1463 aa11.9□□□□□ -0.51
PCCA-212ENST00000636420 MLH3Q9UHC1 1453 aa11.9□□□□□ -0.51
PCCA-212ENST00000636420 ALKQ9UM73 1620 aa11.89□□□□□ -0.51
PCCA-212ENST00000636420 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
PCCA-212ENST00000636420 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
PCCA-212ENST00000636420 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
PCCA-212ENST00000636420 MYO5CQ9NQX4 1742 aa11.88□□□□□ -0.51
PCCA-212ENST00000636420 ZNF142P52746 1687 aaPredicted RBP11.87□□□□□ -0.51
PCCA-212ENST00000636420 KIF14Q15058 1648 aa11.86□□□□□ -0.51
PCCA-212ENST00000636420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.514e-6■□□□□ 8.4
PCCA-212ENST00000636420 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
PCCA-212ENST00000636420 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
PCCA-212ENST00000636420 PKD2Q13563 968 aa11.86□□□□□ -0.51
PCCA-212ENST00000636420 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
PCCA-212ENST00000636420 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
PCCA-212ENST00000636420 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
PCCA-212ENST00000636420 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
PCCA-212ENST00000636420 ARHGAP5Q13017 1502 aa11.83□□□□□ -0.52
PCCA-212ENST00000636420 KIDINS220Q9ULH0 1771 aa11.83□□□□□ -0.52
PCCA-212ENST00000636420 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
PCCA-212ENST00000636420 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
PCCA-212ENST00000636420 ABCC1P33527 1531 aa11.81□□□□□ -0.52
PCCA-212ENST00000636420 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
PCCA-212ENST00000636420 CPS1P31327 1500 aa11.8□□□□□ -0.52
PCCA-212ENST00000636420 TOM1O60784 492 aa11.8□□□□□ -0.52
PCCA-212ENST00000636420 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
PCCA-212ENST00000636420 CDC42BPBQ9Y5S2 1711 aa11.79□□□□□ -0.52
PCCA-212ENST00000636420 SHANK2Q9UPX8 1470 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms