RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
CLN5-209ENST00000636405 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
CLN5-209ENST00000636405 DENND4BO75064 1496 aaPredicted RBP21.42■■□□□ 1.02
CLN5-209ENST00000636405 KCNH8Q96L42 1107 aa21.41■■□□□ 1.02
CLN5-209ENST00000636405 KIF14Q15058 1648 aa21.38■■□□□ 1.01
CLN5-209ENST00000636405 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
CLN5-209ENST00000636405 GCC2Q8IWJ2 1684 aa21.36■■□□□ 1.01
CLN5-209ENST00000636405 GPATCH8Q9UKJ3 1502 aaKnown RBP21.35■■□□□ 1.01
CLN5-209ENST00000636405 ATP10BO94823 1461 aa21.34■■□□□ 1.01
CLN5-209ENST00000636405 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
CLN5-209ENST00000636405 CAMSAP2Q08AD1 1489 aa21.32■■□□□ 1
CLN5-209ENST00000636405 DNMT1P26358 1616 aaKnown RBP21.32■■□□□ 1
CLN5-209ENST00000636405 PTPRGP23470 1445 aa21.31■■□□□ 1
CLN5-209ENST00000636405 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
CLN5-209ENST00000636405 ABCA8O94911 1581 aa21.29■■□□□ 1
CLN5-209ENST00000636405 ROCK1Q13464 1354 aa21.29■■□□□ 1
CLN5-209ENST00000636405 KDM5BQ9UGL1 1544 aa21.28■■□□□ 1
CLN5-209ENST00000636405 L3MBTL2Q969R5 705 aa21.27■■□□□ 1
CLN5-209ENST00000636405 CHD1O14646 1710 aa21.24■□□□□ 0.99
CLN5-209ENST00000636405 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
CLN5-209ENST00000636405 HNRNPMP52272 730 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLN5-209ENST00000636405 ANKRD30BQ9BXX2 1392 aa21.2■□□□□ 0.98
CLN5-209ENST00000636405 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
CLN5-209ENST00000636405 ABCC10Q5T3U5 1492 aa21.19■□□□□ 0.98
CLN5-209ENST00000636405 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
CLN5-209ENST00000636405 ITSN2Q9NZM3 1697 aa21.19■□□□□ 0.98
CLN5-209ENST00000636405 HSPA5P11021 654 aaKnown RBP21.18■□□□□ 0.98
CLN5-209ENST00000636405 NBPF8Q3BBV2 869 aa21.15■□□□□ 0.98
CLN5-209ENST00000636405 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
CLN5-209ENST00000636405 ANKRD30AQ9BXX3 1397 aa21.14■□□□□ 0.97
CLN5-209ENST00000636405 PZPP20742 1482 aa21.13■□□□□ 0.97
CLN5-209ENST00000636405 PKD2Q13563 968 aa21.13■□□□□ 0.97
CLN5-209ENST00000636405 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
CLN5-209ENST00000636405 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
CLN5-209ENST00000636405 ANP32CO43423 234 aa21.11■□□□□ 0.97
CLN5-209ENST00000636405 ANKRD50Q9ULJ7 1429 aa21.1■□□□□ 0.97
CLN5-209ENST00000636405 C9orf84Q5VXU9 1444 aa21.1■□□□□ 0.97
CLN5-209ENST00000636405 RPRD2Q5VT52 1461 aaKnown RBP21.1■□□□□ 0.97
CLN5-209ENST00000636405 EIF4G2P78344 907 aaKnown RBP eCLIP21.09■□□□□ 0.97
CLN5-209ENST00000636405 ADGRL2O95490 1459 aa21.09■□□□□ 0.97
CLN5-209ENST00000636405 WASHC2AQ641Q2 1341 aa21.08■□□□□ 0.96
CLN5-209ENST00000636405 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
CLN5-209ENST00000636405 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
CLN5-209ENST00000636405 NUP155O75694 1391 aa21.06■□□□□ 0.96
CLN5-209ENST00000636405 CROCC2H7BZ55 1655 aa21.06■□□□□ 0.96
CLN5-209ENST00000636405 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
CLN5-209ENST00000636405 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
CLN5-209ENST00000636405 SHROOM2Q13796 1616 aa21.03■□□□□ 0.96
CLN5-209ENST00000636405 MBD5Q9P267 1494 aa21.03■□□□□ 0.96
CLN5-209ENST00000636405 KIF15Q9NS87 1388 aa21.02■□□□□ 0.96
CLN5-209ENST00000636405 KIAA1107Q9UPP5 1409 aa21.01■□□□□ 0.95
CLN5-209ENST00000636405 SAMD9LQ8IVG5 1584 aa20.99■□□□□ 0.95
CLN5-209ENST00000636405 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
CLN5-209ENST00000636405 TTC37Q6PGP7 1564 aa20.98■□□□□ 0.95
CLN5-209ENST00000636405 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
CLN5-209ENST00000636405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.96■□□□□ 0.95
CLN5-209ENST00000636405 SHANK2Q9UPX8 1470 aa20.96■□□□□ 0.95
CLN5-209ENST00000636405 ABCC2Q92887 1545 aa20.96■□□□□ 0.95
CLN5-209ENST00000636405 CCER2I3L3R5 266 aa20.96■□□□□ 0.95
CLN5-209ENST00000636405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
CLN5-209ENST00000636405 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
CLN5-209ENST00000636405 CCDC141Q6ZP82 1450 aa20.94■□□□□ 0.94
CLN5-209ENST00000636405 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
CLN5-209ENST00000636405 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
CLN5-209ENST00000636405 ARHGEF5Q12774 1597 aa20.9■□□□□ 0.94
CLN5-209ENST00000636405 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
CLN5-209ENST00000636405 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.94
CLN5-209ENST00000636405 CCDC7Q96M83 1385 aa20.89■□□□□ 0.94
CLN5-209ENST00000636405 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
CLN5-209ENST00000636405 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
CLN5-209ENST00000636405 RSPH4AQ5TD94 716 aa20.87■□□□□ 0.93
CLN5-209ENST00000636405 CCDC184Q52MB2 194 aa20.86■□□□□ 0.93
CLN5-209ENST00000636405 KIF7Q2M1P5 1343 aa20.86■□□□□ 0.93
CLN5-209ENST00000636405 SPATA31E1Q6ZUB1 1445 aa20.86■□□□□ 0.93
CLN5-209ENST00000636405 ARHGEF12Q9NZN5 1544 aa20.86■□□□□ 0.93
CLN5-209ENST00000636405 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
CLN5-209ENST00000636405 ZCCHC11Q5TAX3 1644 aaKnown RBP20.84■□□□□ 0.93
CLN5-209ENST00000636405 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
CLN5-209ENST00000636405 CNTLNQ9NXG0 1405 aa20.82■□□□□ 0.92
CLN5-209ENST00000636405 EFCAB2Q5VUJ9 269 aa20.81■□□□□ 0.92
CLN5-209ENST00000636405 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
CLN5-209ENST00000636405 USP47Q96K76 1375 aa20.8■□□□□ 0.92
CLN5-209ENST00000636405 FAM135AQ9P2D6 1515 aa20.8■□□□□ 0.92
CLN5-209ENST00000636405 PLCH2O75038 1416 aa20.8■□□□□ 0.92
CLN5-209ENST00000636405 AFAP1Q8N556 730 aa20.79■□□□□ 0.92
CLN5-209ENST00000636405 MYO5CQ9NQX4 1742 aa20.79■□□□□ 0.92
CLN5-209ENST00000636405 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
CLN5-209ENST00000636405 CARD11Q9BXL7 1154 aa20.78■□□□□ 0.92
CLN5-209ENST00000636405 TRAPPC8Q9Y2L5 1435 aa20.77■□□□□ 0.92
CLN5-209ENST00000636405 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLN5-209ENST00000636405 BCANQ96GW7 911 aa20.76■□□□□ 0.91
CLN5-209ENST00000636405 PRKRIP1Q9H875 184 aaPredicted RBP20.76■□□□□ 0.91
CLN5-209ENST00000636405 UHRF1BP1LA0JNW5 1464 aa20.75■□□□□ 0.91
CLN5-209ENST00000636405 FKBP8Q14318 412 aa20.72■□□□□ 0.91
CLN5-209ENST00000636405 ST20-MTHFSA0A0A6YYL1 179 aa20.71■□□□□ 0.91
CLN5-209ENST00000636405 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
CLN5-209ENST00000636405 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
CLN5-209ENST00000636405 BCORL1Q5H9F3 1711 aa20.71■□□□□ 0.91
CLN5-209ENST00000636405 CCDC144AA2RUR9 1427 aa20.71■□□□□ 0.91
CLN5-209ENST00000636405 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms