RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NOP58Q9Y2X3 529 aaKnown RBP20.14■□□□□ 0.82
CACNA1A-220ENST00000635988 KDM6BO15054 1643 aa20.13■□□□□ 0.81
CACNA1A-220ENST00000635988 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
CACNA1A-220ENST00000635988 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
CACNA1A-220ENST00000635988 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
CACNA1A-220ENST00000635988 PRKCSHP14314 528 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-220ENST00000635988 DEKP35659 375 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-220ENST00000635988 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
CACNA1A-220ENST00000635988 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
CACNA1A-220ENST00000635988 TEX14Q8IWB6 1497 aa20.1■□□□□ 0.81
CACNA1A-220ENST00000635988 RNF123Q5XPI4 1314 aa20.08■□□□□ 0.8
CACNA1A-220ENST00000635988 SLC24A1O60721 1099 aa20.08■□□□□ 0.8
CACNA1A-220ENST00000635988 NBPF8Q3BBV2 869 aa20.08■□□□□ 0.8
CACNA1A-220ENST00000635988 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-220ENST00000635988 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-220ENST00000635988 NUDCQ9Y266 331 aa20.07■□□□□ 0.8
CACNA1A-220ENST00000635988 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-220ENST00000635988 NESP48681 1621 aa20.05■□□□□ 0.8
CACNA1A-220ENST00000635988 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
CACNA1A-220ENST00000635988 ANP32AP39687 249 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-220ENST00000635988 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
CACNA1A-220ENST00000635988 FOXD1Q16676 465 aa20.02■□□□□ 0.8
CACNA1A-220ENST00000635988 ARID4BQ4LE39 1312 aaPredicted RBP20.02■□□□□ 0.8
CACNA1A-220ENST00000635988 DAPK1P53355 1430 aa20.01■□□□□ 0.79
CACNA1A-220ENST00000635988 DHX29Q7Z478 1369 aaKnown RBP20■□□□□ 0.79
CACNA1A-220ENST00000635988 IPO9Q96P70 1041 aaKnown RBP20■□□□□ 0.79
CACNA1A-220ENST00000635988 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-220ENST00000635988 DNMT1P26358 1616 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-220ENST00000635988 WDR62O43379 1518 aa19.96■□□□□ 0.79
CACNA1A-220ENST00000635988 PAK3O75914 559 aaPredicted RBP19.96■□□□□ 0.79
CACNA1A-220ENST00000635988 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
CACNA1A-220ENST00000635988 CDK13Q14004 1512 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-220ENST00000635988 ABCC5O15440 1437 aa19.96■□□□□ 0.79
CACNA1A-220ENST00000635988 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-220ENST00000635988 NBR1Q14596 966 aa19.94■□□□□ 0.78
CACNA1A-220ENST00000635988 ZBTB47Q9UFB7 747 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-220ENST00000635988 MBD5Q9P267 1494 aa19.93■□□□□ 0.78
CACNA1A-220ENST00000635988 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-220ENST00000635988 USP47Q96K76 1375 aa19.91■□□□□ 0.78
CACNA1A-220ENST00000635988 PNISRQ8TF01 805 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-220ENST00000635988 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.78
CACNA1A-220ENST00000635988 PZPP20742 1482 aa19.88■□□□□ 0.77
CACNA1A-220ENST00000635988 KIF14Q15058 1648 aa19.88■□□□□ 0.77
CACNA1A-220ENST00000635988 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-220ENST00000635988 TMC1Q8TDI8 760 aa19.87■□□□□ 0.77
CACNA1A-220ENST00000635988 TARBP1Q13395 1621 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-220ENST00000635988 KIAA1107Q9UPP5 1409 aa19.86■□□□□ 0.77
CACNA1A-220ENST00000635988 BCORL1Q5H9F3 1711 aa19.86■□□□□ 0.77
CACNA1A-220ENST00000635988 KDM5CP41229 1560 aa19.85■□□□□ 0.77
CACNA1A-220ENST00000635988 KIF15Q9NS87 1388 aa19.83■□□□□ 0.77
CACNA1A-220ENST00000635988 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.76
CACNA1A-220ENST00000635988 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-220ENST00000635988 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-220ENST00000635988 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
CACNA1A-220ENST00000635988 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
CACNA1A-220ENST00000635988 UHRF1BP1Q6BDS2 1440 aa19.82■□□□□ 0.76
CACNA1A-220ENST00000635988 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
CACNA1A-220ENST00000635988 ZNF644Q9H582 1327 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-220ENST00000635988 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
CACNA1A-220ENST00000635988 RALBP1Q15311 655 aa19.79■□□□□ 0.76
CACNA1A-220ENST00000635988 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
CACNA1A-220ENST00000635988 ADGRL2O95490 1459 aa19.78■□□□□ 0.76
CACNA1A-220ENST00000635988 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-220ENST00000635988 MYBBP1AQ9BQG0 1328 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-220ENST00000635988 ARID3CA6NKF2 412 aa19.76■□□□□ 0.75
CACNA1A-220ENST00000635988 MS4A1P11836 297 aa19.76■□□□□ 0.75
CACNA1A-220ENST00000635988 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-220ENST00000635988 USP35Q9P2H5 1018 aa19.76■□□□□ 0.75
CACNA1A-220ENST00000635988 PDE3BQ13370 1112 aa19.75■□□□□ 0.75
CACNA1A-220ENST00000635988 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-220ENST00000635988 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
CACNA1A-220ENST00000635988 NUP153P49790 1475 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-220ENST00000635988 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
CACNA1A-220ENST00000635988 PKD2Q13563 968 aa19.74■□□□□ 0.75
CACNA1A-220ENST00000635988 ITSN2Q9NZM3 1697 aa19.74■□□□□ 0.75
CACNA1A-220ENST00000635988 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
CACNA1A-220ENST00000635988 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
CACNA1A-220ENST00000635988 CARD11Q9BXL7 1154 aa19.72■□□□□ 0.75
CACNA1A-220ENST00000635988 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
CACNA1A-220ENST00000635988 KIAA0556O60303 1618 aa19.72■□□□□ 0.75
CACNA1A-220ENST00000635988 CFDP1Q9UEE9 299 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-220ENST00000635988 TROQ12816 1431 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-220ENST00000635988 KIAA0586Q9BVV6 1533 aa19.7■□□□□ 0.74
CACNA1A-220ENST00000635988 PDE4AP27815 886 aa19.69■□□□□ 0.74
CACNA1A-220ENST00000635988 EXOC6Q8TAG9 804 aa19.69■□□□□ 0.74
CACNA1A-220ENST00000635988 CROCC2H7BZ55 1655 aa19.69■□□□□ 0.74
CACNA1A-220ENST00000635988 DISP1Q96F81 1524 aa19.69■□□□□ 0.74
CACNA1A-220ENST00000635988 BACH2Q9BYV9 841 aa19.68■□□□□ 0.74
CACNA1A-220ENST00000635988 PPM1GO15355 546 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-220ENST00000635988 ANKRD50Q9ULJ7 1429 aa19.67■□□□□ 0.74
CACNA1A-220ENST00000635988 NLRP13Q86W25 1043 aa19.67■□□□□ 0.74
CACNA1A-220ENST00000635988 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-220ENST00000635988 E9PCH4 1651 aa19.66■□□□□ 0.74
CACNA1A-220ENST00000635988 NPM2Q86SE8 214 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-220ENST00000635988 INSRP06213 1382 aa19.64■□□□□ 0.73
CACNA1A-220ENST00000635988 ST20-MTHFSA0A0A6YYL1 179 aa19.64■□□□□ 0.73
CACNA1A-220ENST00000635988 ADCY10Q96PN6 1610 aa19.64■□□□□ 0.73
CACNA1A-220ENST00000635988 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-220ENST00000635988 KDM5DQ9BY66 1539 aa19.62■□□□□ 0.73
CACNA1A-220ENST00000635988 NEFMP07197 916 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms