RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 RAPGEF6Q8TEU7 1601 aa17.92■□□□□ 0.46
PTPN11-205ENST00000635625 CHD1O14646 1710 aa17.91■□□□□ 0.46
PTPN11-205ENST00000635625 NAIPQ13075 1403 aa17.89■□□□□ 0.45
PTPN11-205ENST00000635625 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
PTPN11-205ENST00000635625 MIER1Q8N108 512 aa17.87■□□□□ 0.45
PTPN11-205ENST00000635625 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
PTPN11-205ENST00000635625 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
PTPN11-205ENST00000635625 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
PTPN11-205ENST00000635625 NUP160Q12769 1436 aa17.83■□□□□ 0.45
PTPN11-205ENST00000635625 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.45
PTPN11-205ENST00000635625 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
PTPN11-205ENST00000635625 ADCY10Q96PN6 1610 aa17.82■□□□□ 0.44
PTPN11-205ENST00000635625 ITSN2Q9NZM3 1697 aa17.82■□□□□ 0.44
PTPN11-205ENST00000635625 CARMIL2Q6F5E8 1435 aa17.8■□□□□ 0.44
PTPN11-205ENST00000635625 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
PTPN11-205ENST00000635625 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
PTPN11-205ENST00000635625 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
PTPN11-205ENST00000635625 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
PTPN11-205ENST00000635625 TROQ12816 1431 aaPredicted RBP17.75■□□□□ 0.43
PTPN11-205ENST00000635625 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
PTPN11-205ENST00000635625 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
PTPN11-205ENST00000635625 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
PTPN11-205ENST00000635625 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
PTPN11-205ENST00000635625 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
PTPN11-205ENST00000635625 SIN3AQ96ST3 1273 aa17.72■□□□□ 0.43
PTPN11-205ENST00000635625 DAPK1P53355 1430 aa17.72■□□□□ 0.43
PTPN11-205ENST00000635625 ADGBQ8N7X0 1667 aa17.72■□□□□ 0.43
PTPN11-205ENST00000635625 ABCA8O94911 1581 aa17.69■□□□□ 0.42
PTPN11-205ENST00000635625 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
PTPN11-205ENST00000635625 CLASP1Q7Z460 1538 aa17.68■□□□□ 0.42
PTPN11-205ENST00000635625 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
PTPN11-205ENST00000635625 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
PTPN11-205ENST00000635625 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
PTPN11-205ENST00000635625 ABCC5O15440 1437 aa17.65■□□□□ 0.42
PTPN11-205ENST00000635625 KIF14Q15058 1648 aa17.65■□□□□ 0.42
PTPN11-205ENST00000635625 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.41
PTPN11-205ENST00000635625 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
PTPN11-205ENST00000635625 PLB1Q6P1J6 1458 aa17.64■□□□□ 0.41
PTPN11-205ENST00000635625 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
PTPN11-205ENST00000635625 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
PTPN11-205ENST00000635625 KDM5BQ9UGL1 1544 aa17.63■□□□□ 0.41
PTPN11-205ENST00000635625 KDM6BO15054 1643 aa17.63■□□□□ 0.41
PTPN11-205ENST00000635625 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
PTPN11-205ENST00000635625 GPATCH8Q9UKJ3 1502 aaKnown RBP17.61■□□□□ 0.41
PTPN11-205ENST00000635625 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
PTPN11-205ENST00000635625 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
PTPN11-205ENST00000635625 DENND4BO75064 1496 aaPredicted RBP17.6■□□□□ 0.41
PTPN11-205ENST00000635625 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
PTPN11-205ENST00000635625 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
PTPN11-205ENST00000635625 SHANK2Q9UPX8 1470 aa17.6■□□□□ 0.41
PTPN11-205ENST00000635625 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.4
PTPN11-205ENST00000635625 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
PTPN11-205ENST00000635625 SHROOM2Q13796 1616 aa17.56■□□□□ 0.4
PTPN11-205ENST00000635625 ABCC10Q5T3U5 1492 aa17.55■□□□□ 0.4
PTPN11-205ENST00000635625 CAPN15O75808 1086 aa17.54■□□□□ 0.4
PTPN11-205ENST00000635625 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
PTPN11-205ENST00000635625 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
PTPN11-205ENST00000635625 CFDP1Q9UEE9 299 aaPredicted RBP17.54■□□□□ 0.4
PTPN11-205ENST00000635625 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
PTPN11-205ENST00000635625 ATP10BO94823 1461 aa17.53■□□□□ 0.4
PTPN11-205ENST00000635625 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
PTPN11-205ENST00000635625 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
PTPN11-205ENST00000635625 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
PTPN11-205ENST00000635625 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.4
PTPN11-205ENST00000635625 NCOA1Q15788 1441 aa17.52■□□□□ 0.4
PTPN11-205ENST00000635625 ANKRD30BQ9BXX2 1392 aa17.5■□□□□ 0.39
PTPN11-205ENST00000635625 ANKRD30AQ9BXX3 1397 aa17.5■□□□□ 0.39
PTPN11-205ENST00000635625 PLEKHD1A6NEE1 506 aa17.5■□□□□ 0.39
PTPN11-205ENST00000635625 CCER2I3L3R5 266 aa17.5■□□□□ 0.39
PTPN11-205ENST00000635625 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
PTPN11-205ENST00000635625 PTPRGP23470 1445 aa17.48■□□□□ 0.39
PTPN11-205ENST00000635625 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
PTPN11-205ENST00000635625 PZPP20742 1482 aa17.47■□□□□ 0.39
PTPN11-205ENST00000635625 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
PTPN11-205ENST00000635625 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
PTPN11-205ENST00000635625 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
PTPN11-205ENST00000635625 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.39
PTPN11-205ENST00000635625 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-205ENST00000635625 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
PTPN11-205ENST00000635625 ANP32CO43423 234 aa17.43■□□□□ 0.38
PTPN11-205ENST00000635625 C9orf84Q5VXU9 1444 aa17.42■□□□□ 0.38
PTPN11-205ENST00000635625 KIAA1107Q9UPP5 1409 aa17.42■□□□□ 0.38
PTPN11-205ENST00000635625 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
PTPN11-205ENST00000635625 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
PTPN11-205ENST00000635625 ABCC2Q92887 1545 aa17.4■□□□□ 0.38
PTPN11-205ENST00000635625 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.373e-6■■■■□ 24.2
PTPN11-205ENST00000635625 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
PTPN11-205ENST00000635625 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
PTPN11-205ENST00000635625 CCDC141Q6ZP82 1450 aa17.39■□□□□ 0.37
PTPN11-205ENST00000635625 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
PTPN11-205ENST00000635625 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
PTPN11-205ENST00000635625 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
PTPN11-205ENST00000635625 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
PTPN11-205ENST00000635625 MYO5CQ9NQX4 1742 aa17.36■□□□□ 0.37
PTPN11-205ENST00000635625 ARHGEF12Q9NZN5 1544 aa17.35■□□□□ 0.37
PTPN11-205ENST00000635625 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
PTPN11-205ENST00000635625 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
PTPN11-205ENST00000635625 TSPY4P0CV99 314 aa17.33■□□□□ 0.37
PTPN11-205ENST00000635625 TSPY10P0CW01 314 aa17.33■□□□□ 0.37
PTPN11-205ENST00000635625 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms