RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 GCC2Q8IWJ2 1684 aa18.43■□□□□ 0.54
BRF1-222ENST00000635152 ABCC5O15440 1437 aa18.43■□□□□ 0.54
BRF1-222ENST00000635152 CFDP1Q9UEE9 299 aaPredicted RBP18.43■□□□□ 0.54
BRF1-222ENST00000635152 RAPGEF6Q8TEU7 1601 aa18.42■□□□□ 0.54
BRF1-222ENST00000635152 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
BRF1-222ENST00000635152 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
BRF1-222ENST00000635152 HSPA5P11021 654 aaKnown RBP18.41■□□□□ 0.54
BRF1-222ENST00000635152 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
BRF1-222ENST00000635152 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
BRF1-222ENST00000635152 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
BRF1-222ENST00000635152 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
BRF1-222ENST00000635152 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
BRF1-222ENST00000635152 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
BRF1-222ENST00000635152 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
BRF1-222ENST00000635152 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■■■■ 36.9
BRF1-222ENST00000635152 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
BRF1-222ENST00000635152 CARMIL2Q6F5E8 1435 aa18.34■□□□□ 0.53
BRF1-222ENST00000635152 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.52
BRF1-222ENST00000635152 BCANQ96GW7 911 aa18.33■□□□□ 0.52
BRF1-222ENST00000635152 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
BRF1-222ENST00000635152 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
BRF1-222ENST00000635152 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
BRF1-222ENST00000635152 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
BRF1-222ENST00000635152 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
BRF1-222ENST00000635152 NUP160Q12769 1436 aa18.29■□□□□ 0.52
BRF1-222ENST00000635152 KIF14Q15058 1648 aa18.29■□□□□ 0.52
BRF1-222ENST00000635152 FKBP8Q14318 412 aa18.28■□□□□ 0.52
BRF1-222ENST00000635152 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
BRF1-222ENST00000635152 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
BRF1-222ENST00000635152 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
BRF1-222ENST00000635152 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
BRF1-222ENST00000635152 PKD2Q13563 968 aa18.23■□□□□ 0.51
BRF1-222ENST00000635152 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
BRF1-222ENST00000635152 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.51
BRF1-222ENST00000635152 ATP10BO94823 1461 aa18.21■□□□□ 0.51
BRF1-222ENST00000635152 PZPP20742 1482 aa18.21■□□□□ 0.51
BRF1-222ENST00000635152 TEX14Q8IWB6 1497 aa18.21■□□□□ 0.5
BRF1-222ENST00000635152 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
BRF1-222ENST00000635152 HNRNPMP52272 730 aaKnown RBP eCLIP18.19■□□□□ 0.5
BRF1-222ENST00000635152 NEFLP07196 543 aa18.18■□□□□ 0.5
BRF1-222ENST00000635152 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
BRF1-222ENST00000635152 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
BRF1-222ENST00000635152 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
BRF1-222ENST00000635152 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
BRF1-222ENST00000635152 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
BRF1-222ENST00000635152 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
BRF1-222ENST00000635152 POLR3GLQ9BT43 218 aa18.16■□□□□ 0.5
BRF1-222ENST00000635152 PTPRGP23470 1445 aa18.16■□□□□ 0.5
BRF1-222ENST00000635152 CNTLNQ9NXG0 1405 aa18.15■□□□□ 0.5
BRF1-222ENST00000635152 NUP155O75694 1391 aa18.15■□□□□ 0.5
BRF1-222ENST00000635152 ABCA8O94911 1581 aa18.15■□□□□ 0.5
BRF1-222ENST00000635152 ADCY10Q96PN6 1610 aa18.15■□□□□ 0.5
BRF1-222ENST00000635152 KIAA1107Q9UPP5 1409 aa18.14■□□□□ 0.49
BRF1-222ENST00000635152 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.49
BRF1-222ENST00000635152 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
BRF1-222ENST00000635152 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
BRF1-222ENST00000635152 ABCC10Q5T3U5 1492 aa18.12■□□□□ 0.49
BRF1-222ENST00000635152 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
BRF1-222ENST00000635152 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
BRF1-222ENST00000635152 ADGBQ8N7X0 1667 aa18.11■□□□□ 0.49
BRF1-222ENST00000635152 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
BRF1-222ENST00000635152 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
BRF1-222ENST00000635152 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
BRF1-222ENST00000635152 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
BRF1-222ENST00000635152 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
BRF1-222ENST00000635152 CROCC2H7BZ55 1655 aa18.08■□□□□ 0.48
BRF1-222ENST00000635152 KIF15Q9NS87 1388 aa18.07■□□□□ 0.48
BRF1-222ENST00000635152 USP47Q96K76 1375 aa18.05■□□□□ 0.48
BRF1-222ENST00000635152 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
BRF1-222ENST00000635152 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.47
BRF1-222ENST00000635152 DCAF11Q8TEB1 546 aa18.01■□□□□ 0.47
BRF1-222ENST00000635152 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
BRF1-222ENST00000635152 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
BRF1-222ENST00000635152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■□□□□ 10.4
BRF1-222ENST00000635152 CCDC141Q6ZP82 1450 aa17.97■□□□□ 0.47
BRF1-222ENST00000635152 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
BRF1-222ENST00000635152 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
BRF1-222ENST00000635152 CHD1O14646 1710 aa17.96■□□□□ 0.47
BRF1-222ENST00000635152 ST20-MTHFSA0A0A6YYL1 179 aa17.94■□□□□ 0.46
BRF1-222ENST00000635152 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
BRF1-222ENST00000635152 ARHGAP5Q13017 1502 aa17.94■□□□□ 0.46
BRF1-222ENST00000635152 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
BRF1-222ENST00000635152 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
BRF1-222ENST00000635152 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
BRF1-222ENST00000635152 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
BRF1-222ENST00000635152 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
BRF1-222ENST00000635152 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
BRF1-222ENST00000635152 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
BRF1-222ENST00000635152 TTC37Q6PGP7 1564 aa17.9■□□□□ 0.46
BRF1-222ENST00000635152 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
BRF1-222ENST00000635152 PREX2Q70Z35 1606 aa17.9■□□□□ 0.46
BRF1-222ENST00000635152 KDM5CP41229 1560 aa17.89■□□□□ 0.45
BRF1-222ENST00000635152 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.45
BRF1-222ENST00000635152 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.45
BRF1-222ENST00000635152 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
BRF1-222ENST00000635152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.89■□□□□ 0.45
BRF1-222ENST00000635152 ROCK2O75116 1388 aaKnown RBP17.88■□□□□ 0.45
BRF1-222ENST00000635152 ZBED9Q6R2W3 1325 aa17.88■□□□□ 0.45
BRF1-222ENST00000635152 CCDC144AA2RUR9 1427 aa17.87■□□□□ 0.45
BRF1-222ENST00000635152 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms