RNA–Protein interactions for RNA: ENST00000630330.2

RAPH1-213, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAPH1, Length 4,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-213ENST00000630330 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
RAPH1-213ENST00000630330 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
RAPH1-213ENST00000630330 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
RAPH1-213ENST00000630330 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
RAPH1-213ENST00000630330 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.53
RAPH1-213ENST00000630330 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
RAPH1-213ENST00000630330 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
RAPH1-213ENST00000630330 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
RAPH1-213ENST00000630330 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
RAPH1-213ENST00000630330 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
RAPH1-213ENST00000630330 NAIPQ13075 1403 aa18.35■□□□□ 0.53
RAPH1-213ENST00000630330 CFTRP13569 1480 aa18.35■□□□□ 0.53
RAPH1-213ENST00000630330 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
RAPH1-213ENST00000630330 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
RAPH1-213ENST00000630330 DDRGK1Q96HY6 314 aa18.33■□□□□ 0.53
RAPH1-213ENST00000630330 USP47Q96K76 1375 aa18.32■□□□□ 0.52
RAPH1-213ENST00000630330 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
RAPH1-213ENST00000630330 CRBNQ96SW2 442 aa18.32■□□□□ 0.52
RAPH1-213ENST00000630330 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
RAPH1-213ENST00000630330 NCOA2Q15596 1464 aa18.32■□□□□ 0.52
RAPH1-213ENST00000630330 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
RAPH1-213ENST00000630330 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
RAPH1-213ENST00000630330 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
RAPH1-213ENST00000630330 PCF11O94913 1555 aaKnown RBP18.29■□□□□ 0.52
RAPH1-213ENST00000630330 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
RAPH1-213ENST00000630330 SLKQ9H2G2 1235 aaPredicted RBP18.28■□□□□ 0.52
RAPH1-213ENST00000630330 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
RAPH1-213ENST00000630330 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
RAPH1-213ENST00000630330 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
RAPH1-213ENST00000630330 NUP155O75694 1391 aa18.23■□□□□ 0.51
RAPH1-213ENST00000630330 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
RAPH1-213ENST00000630330 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.22■□□□□ 0.51
RAPH1-213ENST00000630330 GSE1Q14687 1217 aa18.22■□□□□ 0.51
RAPH1-213ENST00000630330 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
RAPH1-213ENST00000630330 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
RAPH1-213ENST00000630330 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
RAPH1-213ENST00000630330 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.5
RAPH1-213ENST00000630330 BACH2Q9BYV9 841 aa18.2■□□□□ 0.5
RAPH1-213ENST00000630330 KNSTRNQ9Y448 316 aa18.2■□□□□ 0.5
RAPH1-213ENST00000630330 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
RAPH1-213ENST00000630330 RALBP1Q15311 655 aa18.19■□□□□ 0.5
RAPH1-213ENST00000630330 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
RAPH1-213ENST00000630330 FYCO1Q9BQS8 1478 aa18.19■□□□□ 0.5
RAPH1-213ENST00000630330 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
RAPH1-213ENST00000630330 GZF1Q9H116 711 aaPredicted RBP18.18■□□□□ 0.5
RAPH1-213ENST00000630330 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
RAPH1-213ENST00000630330 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
RAPH1-213ENST00000630330 PANK3Q9H999 370 aa18.17■□□□□ 0.5
RAPH1-213ENST00000630330 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
RAPH1-213ENST00000630330 KIF15Q9NS87 1388 aa18.15■□□□□ 0.5
RAPH1-213ENST00000630330 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
RAPH1-213ENST00000630330 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
RAPH1-213ENST00000630330 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
RAPH1-213ENST00000630330 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
RAPH1-213ENST00000630330 NCOA1Q15788 1441 aa18.14■□□□□ 0.5
RAPH1-213ENST00000630330 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.5
RAPH1-213ENST00000630330 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
RAPH1-213ENST00000630330 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
RAPH1-213ENST00000630330 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
RAPH1-213ENST00000630330 USP35Q9P2H5 1018 aa18.13■□□□□ 0.49
RAPH1-213ENST00000630330 CHGAP10645 457 aaKnown RBP18.13■□□□□ 0.49
RAPH1-213ENST00000630330 NBPF1Q3BBV0 1214 aa18.11■□□□□ 0.49
RAPH1-213ENST00000630330 PTPN23Q9H3S7 1636 aa18.1■□□□□ 0.49
RAPH1-213ENST00000630330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.49
RAPH1-213ENST00000630330 MAP3K1Q13233 1512 aa18.09■□□□□ 0.49
RAPH1-213ENST00000630330 CLUAP1Q96AJ1 413 aa18.08■□□□□ 0.48
RAPH1-213ENST00000630330 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
RAPH1-213ENST00000630330 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
RAPH1-213ENST00000630330 ANKRD30BQ9BXX2 1392 aa18.07■□□□□ 0.48
RAPH1-213ENST00000630330 MS4A1P11836 297 aa18.07■□□□□ 0.48
RAPH1-213ENST00000630330 TMF1P82094 1093 aa18.07■□□□□ 0.48
RAPH1-213ENST00000630330 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
RAPH1-213ENST00000630330 BECN1Q14457 450 aa18.06■□□□□ 0.48
RAPH1-213ENST00000630330 NESP48681 1621 aa18.06■□□□□ 0.48
RAPH1-213ENST00000630330 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
RAPH1-213ENST00000630330 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
RAPH1-213ENST00000630330 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
RAPH1-213ENST00000630330 GOLGA2Q08379 1002 aa18.04■□□□□ 0.48
RAPH1-213ENST00000630330 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
RAPH1-213ENST00000630330 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
RAPH1-213ENST00000630330 APAF1O14727 1248 aa18.01■□□□□ 0.47
RAPH1-213ENST00000630330 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
RAPH1-213ENST00000630330 CDK13Q14004 1512 aaKnown RBP18.01■□□□□ 0.47
RAPH1-213ENST00000630330 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
RAPH1-213ENST00000630330 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
RAPH1-213ENST00000630330 CENPQQ7L2Z9 268 aaPredicted RBP18■□□□□ 0.47
RAPH1-213ENST00000630330 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
RAPH1-213ENST00000630330 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
RAPH1-213ENST00000630330 BCAR3O75815 825 aa17.97■□□□□ 0.47
RAPH1-213ENST00000630330 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
RAPH1-213ENST00000630330 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
RAPH1-213ENST00000630330 DHX29Q7Z478 1369 aaKnown RBP17.94■□□□□ 0.46
RAPH1-213ENST00000630330 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
RAPH1-213ENST00000630330 EFCAB5A4FU69 1503 aa17.92■□□□□ 0.46
RAPH1-213ENST00000630330 POGKQ9P215 609 aa17.92■□□□□ 0.46
RAPH1-213ENST00000630330 DAPK1P53355 1430 aa17.91■□□□□ 0.46
RAPH1-213ENST00000630330 MFAP1P55081 439 aaKnown RBP17.91■□□□□ 0.46
RAPH1-213ENST00000630330 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
RAPH1-213ENST00000630330 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
RAPH1-213ENST00000630330 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms