RNA–Protein interactions for RNA: ENST00000630077.2

SYNJ1-211, Transcript of synaptojanin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNJ1, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ1-211ENST00000630077 TSPY4P0CV99 314 aa12.18□□□□□ -0.46
SYNJ1-211ENST00000630077 TSPY10P0CW01 314 aa12.18□□□□□ -0.46
SYNJ1-211ENST00000630077 FTSJ3Q8IY81 847 aaKnown RBP12.18□□□□□ -0.46
SYNJ1-211ENST00000630077 CWC22Q9HCG8 908 aaKnown RBP12.17□□□□□ -0.46
SYNJ1-211ENST00000630077 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
SYNJ1-211ENST00000630077 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
SYNJ1-211ENST00000630077 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
SYNJ1-211ENST00000630077 CLIP1P30622 1438 aa12.16□□□□□ -0.46
SYNJ1-211ENST00000630077 DRC7Q8IY82 874 aa12.15□□□□□ -0.46
SYNJ1-211ENST00000630077 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
SYNJ1-211ENST00000630077 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
SYNJ1-211ENST00000630077 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
SYNJ1-211ENST00000630077 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.46
SYNJ1-211ENST00000630077 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
SYNJ1-211ENST00000630077 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
SYNJ1-211ENST00000630077 MAPK8IP3Q9UPT6 1336 aa12.14□□□□□ -0.47
SYNJ1-211ENST00000630077 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
SYNJ1-211ENST00000630077 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
SYNJ1-211ENST00000630077 USP35Q9P2H5 1018 aa12.13□□□□□ -0.47
SYNJ1-211ENST00000630077 RAD54L2Q9Y4B4 1467 aa12.13□□□□□ -0.47
SYNJ1-211ENST00000630077 RAPGEF2Q9Y4G8 1499 aa12.13□□□□□ -0.47
SYNJ1-211ENST00000630077 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
SYNJ1-211ENST00000630077 ERICH6BQ5W0A0 696 aa12.12□□□□□ -0.47
SYNJ1-211ENST00000630077 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
SYNJ1-211ENST00000630077 IFT140Q96RY7 1462 aa12.12□□□□□ -0.47
SYNJ1-211ENST00000630077 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
SYNJ1-211ENST00000630077 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
SYNJ1-211ENST00000630077 IGF1RP08069 1367 aa12.11□□□□□ -0.47
SYNJ1-211ENST00000630077 CHMP7Q8WUX9 453 aaPredicted RBP12.11□□□□□ -0.47
SYNJ1-211ENST00000630077 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
SYNJ1-211ENST00000630077 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
SYNJ1-211ENST00000630077 MARCH6O60337 910 aa12.11□□□□□ -0.47
SYNJ1-211ENST00000630077 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
SYNJ1-211ENST00000630077 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 GOLGA6L1Q8N7Z2 621 aa12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 CALRP27797 417 aaKnown RBP12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
SYNJ1-211ENST00000630077 KIF21BO75037 1637 aa12.09□□□□□ -0.47
SYNJ1-211ENST00000630077 MCCP23508 829 aa12.09□□□□□ -0.47
SYNJ1-211ENST00000630077 POGKQ9P215 609 aa12.09□□□□□ -0.47
SYNJ1-211ENST00000630077 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.47
SYNJ1-211ENST00000630077 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
SYNJ1-211ENST00000630077 HSP90AB1P08238 724 aaKnown RBP12.07□□□□□ -0.48
SYNJ1-211ENST00000630077 NAP1L5Q96NT1 182 aaPredicted RBP12.07□□□□□ -0.48
SYNJ1-211ENST00000630077 TPM4P67936 248 aa12.06□□□□□ -0.48
SYNJ1-211ENST00000630077 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
SYNJ1-211ENST00000630077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.06□□□□□ -0.485e-6■■■■■ 41.7
SYNJ1-211ENST00000630077 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
SYNJ1-211ENST00000630077 PRXQ9BXM0 1461 aa12.05□□□□□ -0.48
SYNJ1-211ENST00000630077 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
SYNJ1-211ENST00000630077 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
SYNJ1-211ENST00000630077 PPP4R2Q9NY27 417 aa12.05□□□□□ -0.48
SYNJ1-211ENST00000630077 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
SYNJ1-211ENST00000630077 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
SYNJ1-211ENST00000630077 GRIN2BQ13224 1484 aa12.03□□□□□ -0.48
SYNJ1-211ENST00000630077 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNJ1-211ENST00000630077 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
SYNJ1-211ENST00000630077 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
SYNJ1-211ENST00000630077 MRS2Q9HD23 443 aa12.03□□□□□ -0.48
SYNJ1-211ENST00000630077 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.48
SYNJ1-211ENST00000630077 MSH5O43196 834 aa12.02□□□□□ -0.49
SYNJ1-211ENST00000630077 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
SYNJ1-211ENST00000630077 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
SYNJ1-211ENST00000630077 FRAT2O75474 233 aaPredicted RBP12.01□□□□□ -0.49
SYNJ1-211ENST00000630077 PAF1Q8N7H5 531 aa12.01□□□□□ -0.49
SYNJ1-211ENST00000630077 MS4A1P11836 297 aa12.01□□□□□ -0.49
SYNJ1-211ENST00000630077 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
SYNJ1-211ENST00000630077 KCNH8Q96L42 1107 aa12□□□□□ -0.49
SYNJ1-211ENST00000630077 MTUS2Q5JR59 1369 aa11.99□□□□□ -0.49
SYNJ1-211ENST00000630077 TPM3P06753 285 aa11.99□□□□□ -0.49
SYNJ1-211ENST00000630077 KIAA1211Q6ZU35 1233 aa11.99□□□□□ -0.49
SYNJ1-211ENST00000630077 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
SYNJ1-211ENST00000630077 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.496e-8■■■□□ 16
SYNJ1-211ENST00000630077 WDR62O43379 1518 aa11.99□□□□□ -0.49
SYNJ1-211ENST00000630077 RRP12Q5JTH9 1297 aaKnown RBP11.98□□□□□ -0.49
SYNJ1-211ENST00000630077 CREBRFQ8IUR6 639 aa11.98□□□□□ -0.49
SYNJ1-211ENST00000630077 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
SYNJ1-211ENST00000630077 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
SYNJ1-211ENST00000630077 SETQ01105 290 aaPredicted RBP11.97□□□□□ -0.49
SYNJ1-211ENST00000630077 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
SYNJ1-211ENST00000630077 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
SYNJ1-211ENST00000630077 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
SYNJ1-211ENST00000630077 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
SYNJ1-211ENST00000630077 MSNP26038 577 aaKnown RBP11.97□□□□□ -0.49
SYNJ1-211ENST00000630077 CUL7Q14999 1698 aa11.96□□□□□ -0.5
SYNJ1-211ENST00000630077 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
SYNJ1-211ENST00000630077 SOX12O15370 315 aa11.95□□□□□ -0.5
SYNJ1-211ENST00000630077 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
SYNJ1-211ENST00000630077 FOXD1Q16676 465 aa11.95□□□□□ -0.5
SYNJ1-211ENST00000630077 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
SYNJ1-211ENST00000630077 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
SYNJ1-211ENST00000630077 CHMP3Q9Y3E7 222 aa11.93□□□□□ -0.5
SYNJ1-211ENST00000630077 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
SYNJ1-211ENST00000630077 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
SYNJ1-211ENST00000630077 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
SYNJ1-211ENST00000630077 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
SYNJ1-211ENST00000630077 TPM2P07951 284 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms