RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
TCF4-266ENST00000628689 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
TCF4-266ENST00000628689 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
TCF4-266ENST00000628689 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
TCF4-266ENST00000628689 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
TCF4-266ENST00000628689 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
TCF4-266ENST00000628689 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
TCF4-266ENST00000628689 RICTORQ6R327 1708 aa12.75□□□□□ -0.37
TCF4-266ENST00000628689 FHOD3Q2V2M9 1422 aa12.74□□□□□ -0.37
TCF4-266ENST00000628689 ATP10BO94823 1461 aa12.73□□□□□ -0.37
TCF4-266ENST00000628689 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
TCF4-266ENST00000628689 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
TCF4-266ENST00000628689 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.38
TCF4-266ENST00000628689 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
TCF4-266ENST00000628689 PIP4K2BP78356 416 aa12.69□□□□□ -0.38
TCF4-266ENST00000628689 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
TCF4-266ENST00000628689 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
TCF4-266ENST00000628689 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
TCF4-266ENST00000628689 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
TCF4-266ENST00000628689 RGS17Q9UGC6 210 aaPredicted RBP12.66□□□□□ -0.38
TCF4-266ENST00000628689 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
TCF4-266ENST00000628689 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
TCF4-266ENST00000628689 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
TCF4-266ENST00000628689 HECW1Q76N89 1606 aa12.63□□□□□ -0.39
TCF4-266ENST00000628689 ATP10AO60312 1499 aa12.63□□□□□ -0.39
TCF4-266ENST00000628689 TOM1O60784 492 aa12.62□□□□□ -0.39
TCF4-266ENST00000628689 TRAPPC8Q9Y2L5 1435 aa12.61□□□□□ -0.39
TCF4-266ENST00000628689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
TCF4-266ENST00000628689 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
TCF4-266ENST00000628689 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
TCF4-266ENST00000628689 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
TCF4-266ENST00000628689 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
TCF4-266ENST00000628689 C3P01024 1663 aa12.59□□□□□ -0.39
TCF4-266ENST00000628689 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
TCF4-266ENST00000628689 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
TCF4-266ENST00000628689 SCAPERQ9BY12 1400 aa12.55□□□□□ -0.4
TCF4-266ENST00000628689 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
TCF4-266ENST00000628689 PKD2Q13563 968 aa12.54□□□□□ -0.4
TCF4-266ENST00000628689 POTEAQ6S8J7 498 aa12.54□□□□□ -0.4
TCF4-266ENST00000628689 CTTNBP2Q8WZ74 1663 aa12.53□□□□□ -0.4
TCF4-266ENST00000628689 PLEKHD1A6NEE1 506 aa12.51□□□□□ -0.41
TCF4-266ENST00000628689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.51□□□□□ -0.41
TCF4-266ENST00000628689 ESF1Q9H501 851 aaKnown RBP12.5□□□□□ -0.41
TCF4-266ENST00000628689 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
TCF4-266ENST00000628689 ALKQ9UM73 1620 aa12.49□□□□□ -0.41
TCF4-266ENST00000628689 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
TCF4-266ENST00000628689 TCOF1Q13428 1488 aaKnown RBP12.47□□□□□ -0.41
TCF4-266ENST00000628689 RAPGEF6Q8TEU7 1601 aa12.47□□□□□ -0.41
TCF4-266ENST00000628689 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
TCF4-266ENST00000628689 NUP153P49790 1475 aaKnown RBP12.46□□□□□ -0.42
TCF4-266ENST00000628689 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
TCF4-266ENST00000628689 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
TCF4-266ENST00000628689 CPS1P31327 1500 aa12.45□□□□□ -0.42
TCF4-266ENST00000628689 NPATQ14207 1427 aa12.45□□□□□ -0.42
TCF4-266ENST00000628689 PLCH2O75038 1416 aa12.44□□□□□ -0.42
TCF4-266ENST00000628689 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
TCF4-266ENST00000628689 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
TCF4-266ENST00000628689 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
TCF4-266ENST00000628689 AGLP35573 1532 aa12.42□□□□□ -0.42
TCF4-266ENST00000628689 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
TCF4-266ENST00000628689 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
TCF4-266ENST00000628689 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
TCF4-266ENST00000628689 DIP2CQ9Y2E4 1556 aa12.41□□□□□ -0.42
TCF4-266ENST00000628689 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
TCF4-266ENST00000628689 REREQ9P2R6 1566 aa12.4□□□□□ -0.42
TCF4-266ENST00000628689 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
TCF4-266ENST00000628689 ZNF518AQ6AHZ1 1483 aa12.38□□□□□ -0.43
TCF4-266ENST00000628689 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
TCF4-266ENST00000628689 KDM5CP41229 1560 aa12.37□□□□□ -0.43
TCF4-266ENST00000628689 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
TCF4-266ENST00000628689 CEP170BQ9Y4F5 1589 aaPredicted RBP12.36□□□□□ -0.43
TCF4-266ENST00000628689 ABCA6Q8N139 1617 aa12.35□□□□□ -0.43
TCF4-266ENST00000628689 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
TCF4-266ENST00000628689 MROH2AA6NES4 1674 aa12.34□□□□□ -0.43
TCF4-266ENST00000628689 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
TCF4-266ENST00000628689 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
TCF4-266ENST00000628689 VWDEQ8N2E2 1590 aa12.33□□□□□ -0.44
TCF4-266ENST00000628689 NEURL4Q96JN8 1562 aa12.31□□□□□ -0.44
TCF4-266ENST00000628689 PRXQ9BXM0 1461 aa12.3□□□□□ -0.44
TCF4-266ENST00000628689 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
TCF4-266ENST00000628689 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
TCF4-266ENST00000628689 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
TCF4-266ENST00000628689 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
TCF4-266ENST00000628689 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
TCF4-266ENST00000628689 STRCP1A6NGW2 1772 aa12.26□□□□□ -0.45
TCF4-266ENST00000628689 ANKLE2Q86XL3 938 aa12.26□□□□□ -0.45
TCF4-266ENST00000628689 CLTCQ00610 1675 aaKnown RBP12.26□□□□□ -0.45
TCF4-266ENST00000628689 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
TCF4-266ENST00000628689 RNF17Q9BXT8 1623 aaKnown RBP12.25□□□□□ -0.45
TCF4-266ENST00000628689 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
TCF4-266ENST00000628689 ARHGAP5Q13017 1502 aa12.24□□□□□ -0.45
TCF4-266ENST00000628689 CDK13Q14004 1512 aaKnown RBP12.24□□□□□ -0.45
TCF4-266ENST00000628689 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
TCF4-266ENST00000628689 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
TCF4-266ENST00000628689 FAM135BQ49AJ0 1406 aa12.21□□□□□ -0.45
TCF4-266ENST00000628689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
TCF4-266ENST00000628689 GGT6Q6P531 493 aa12.2□□□□□ -0.46
TCF4-266ENST00000628689 MED14O60244 1454 aa12.2□□□□□ -0.46
TCF4-266ENST00000628689 KIF14Q15058 1648 aa12.18□□□□□ -0.46
TCF4-266ENST00000628689 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms