RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 FKBP8Q14318 412 aa26.79■■□□□ 1.88
PTBP1-220ENST00000627714 RPRD2Q5VT52 1461 aaKnown RBP26.79■■□□□ 1.88
PTBP1-220ENST00000627714 TSHZ2Q9NRE2 1034 aa26.77■■□□□ 1.88
PTBP1-220ENST00000627714 ITSN2Q9NZM3 1697 aa26.76■■□□□ 1.88
PTBP1-220ENST00000627714 ANKRD30BQ9BXX2 1392 aa26.76■■□□□ 1.88
PTBP1-220ENST00000627714 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
PTBP1-220ENST00000627714 WASHC2AQ641Q2 1341 aa26.76■■□□□ 1.87
PTBP1-220ENST00000627714 TROQ12816 1431 aaPredicted RBP26.74■■□□□ 1.87
PTBP1-220ENST00000627714 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
PTBP1-220ENST00000627714 L3MBTL2Q969R5 705 aa26.73■■□□□ 1.87
PTBP1-220ENST00000627714 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
PTBP1-220ENST00000627714 ADCY10Q96PN6 1610 aa26.72■■□□□ 1.87
PTBP1-220ENST00000627714 TEX14Q8IWB6 1497 aa26.71■■□□□ 1.87
PTBP1-220ENST00000627714 ADGBQ8N7X0 1667 aa26.7■■□□□ 1.87
PTBP1-220ENST00000627714 NCOA1Q15788 1441 aa26.69■■□□□ 1.86
PTBP1-220ENST00000627714 CAMSAP2Q08AD1 1489 aa26.67■■□□□ 1.86
PTBP1-220ENST00000627714 SYNJ2O15056 1496 aa26.67■■□□□ 1.86
PTBP1-220ENST00000627714 ADGRL2O95490 1459 aa26.64■■□□□ 1.86
PTBP1-220ENST00000627714 POLR1AO95602 1720 aaPredicted RBP26.64■■□□□ 1.86
PTBP1-220ENST00000627714 CEP170Q5SW79 1584 aa26.64■■□□□ 1.86
PTBP1-220ENST00000627714 ZNF644Q9H582 1327 aaPredicted RBP26.64■■□□□ 1.85
PTBP1-220ENST00000627714 BCANQ96GW7 911 aa26.63■■□□□ 1.85
PTBP1-220ENST00000627714 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
PTBP1-220ENST00000627714 SLC4A1APQ9BWU0 796 aaKnown RBP26.63■■□□□ 1.85
PTBP1-220ENST00000627714 CCDC7Q96M83 1385 aa26.63■■□□□ 1.85
PTBP1-220ENST00000627714 CARMIL2Q6F5E8 1435 aa26.62■■□□□ 1.85
PTBP1-220ENST00000627714 PRG4Q92954 1404 aaPredicted RBP26.62■■□□□ 1.85
PTBP1-220ENST00000627714 FOXD1Q16676 465 aa26.62■■□□□ 1.85
PTBP1-220ENST00000627714 GPATCH8Q9UKJ3 1502 aaKnown RBP26.61■■□□□ 1.85
PTBP1-220ENST00000627714 PZPP20742 1482 aa26.59■■□□□ 1.85
PTBP1-220ENST00000627714 CFDP1Q9UEE9 299 aaPredicted RBP26.59■■□□□ 1.85
PTBP1-220ENST00000627714 HNRNPUQ00839 825 aaKnown RBP eCLIP26.58■■□□□ 1.85
PTBP1-220ENST00000627714 PLB1Q6P1J6 1458 aa26.57■■□□□ 1.84
PTBP1-220ENST00000627714 SPATA31E1Q6ZUB1 1445 aa26.57■■□□□ 1.84
PTBP1-220ENST00000627714 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
PTBP1-220ENST00000627714 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
PTBP1-220ENST00000627714 NUP160Q12769 1436 aa26.56■■□□□ 1.84
PTBP1-220ENST00000627714 KIF14Q15058 1648 aa26.55■■□□□ 1.84
PTBP1-220ENST00000627714 NBPF8Q3BBV2 869 aa26.54■■□□□ 1.84
PTBP1-220ENST00000627714 KIAA1107Q9UPP5 1409 aa26.53■■□□□ 1.84
PTBP1-220ENST00000627714 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
PTBP1-220ENST00000627714 MBD5Q9P267 1494 aa26.51■■□□□ 1.83
PTBP1-220ENST00000627714 PRKRIP1Q9H875 184 aaPredicted RBP26.5■■□□□ 1.83
PTBP1-220ENST00000627714 SHANK2Q9UPX8 1470 aa26.5■■□□□ 1.83
PTBP1-220ENST00000627714 C11orf95C9JLR9 678 aaPredicted RBP26.49■■□□□ 1.83
PTBP1-220ENST00000627714 ABCA8O94911 1581 aa26.47■■□□□ 1.83
PTBP1-220ENST00000627714 JPH4Q96JJ6 628 aa26.46■■□□□ 1.83
PTBP1-220ENST00000627714 KIF7Q2M1P5 1343 aa26.45■■□□□ 1.82
PTBP1-220ENST00000627714 CDC42BPAQ5VT25 1732 aa26.44■■□□□ 1.82
PTBP1-220ENST00000627714 ERICH6BQ5W0A0 696 aa26.44■■□□□ 1.82
PTBP1-220ENST00000627714 ANKRD50Q9ULJ7 1429 aa26.43■■□□□ 1.82
PTBP1-220ENST00000627714 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
PTBP1-220ENST00000627714 PLEKHD1A6NEE1 506 aa26.4■■□□□ 1.82
PTBP1-220ENST00000627714 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
PTBP1-220ENST00000627714 KDM5DQ9BY66 1539 aa26.39■■□□□ 1.81
PTBP1-220ENST00000627714 ARID4BQ4LE39 1312 aaPredicted RBP26.38■■□□□ 1.81
PTBP1-220ENST00000627714 FBLN2P98095 1184 aa26.37■■□□□ 1.81
PTBP1-220ENST00000627714 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
PTBP1-220ENST00000627714 C9orf84Q5VXU9 1444 aa26.36■■□□□ 1.81
PTBP1-220ENST00000627714 PKD2Q13563 968 aa26.36■■□□□ 1.81
PTBP1-220ENST00000627714 ZBED9Q6R2W3 1325 aa26.36■■□□□ 1.81
PTBP1-220ENST00000627714 ATP10BO94823 1461 aa26.36■■□□□ 1.81
PTBP1-220ENST00000627714 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
PTBP1-220ENST00000627714 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
PTBP1-220ENST00000627714 CCDC184Q52MB2 194 aa26.34■■□□□ 1.81
PTBP1-220ENST00000627714 ARHGEF5Q12774 1597 aa26.33■■□□□ 1.81
PTBP1-220ENST00000627714 USP47Q96K76 1375 aa26.33■■□□□ 1.81
PTBP1-220ENST00000627714 KDM5CP41229 1560 aa26.33■■□□□ 1.81
PTBP1-220ENST00000627714 RALGAPBQ86X10 1494 aa26.31■■□□□ 1.8
PTBP1-220ENST00000627714 RBM19Q9Y4C8 960 aaKnown RBP26.29■■□□□ 1.8
PTBP1-220ENST00000627714 FAM9BQ8IZU0 186 aa26.28■■□□□ 1.8
PTBP1-220ENST00000627714 BCORL1Q5H9F3 1711 aa26.28■■□□□ 1.8
PTBP1-220ENST00000627714 NUP155O75694 1391 aa26.28■■□□□ 1.8
PTBP1-220ENST00000627714 TSPY4P0CV99 314 aa26.27■■□□□ 1.8
PTBP1-220ENST00000627714 TSPY10P0CW01 314 aa26.27■■□□□ 1.8
PTBP1-220ENST00000627714 ANP32EQ9BTT0 268 aa26.27■■□□□ 1.8
PTBP1-220ENST00000627714 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
PTBP1-220ENST00000627714 PTPRGP23470 1445 aa26.27■■□□□ 1.8
PTBP1-220ENST00000627714 DHX29Q7Z478 1369 aaKnown RBP26.27■■□□□ 1.8
PTBP1-220ENST00000627714 KIF15Q9NS87 1388 aa26.22■■□□□ 1.79
PTBP1-220ENST00000627714 PPP4R2Q9NY27 417 aa26.21■■□□□ 1.79
PTBP1-220ENST00000627714 PREX2Q70Z35 1606 aa26.2■■□□□ 1.78
PTBP1-220ENST00000627714 CCDC141Q6ZP82 1450 aa26.19■■□□□ 1.78
PTBP1-220ENST00000627714 RSPH4AQ5TD94 716 aa26.19■■□□□ 1.78
PTBP1-220ENST00000627714 ZNF326Q5BKZ1 582 aaKnown RBP26.18■■□□□ 1.78
PTBP1-220ENST00000627714 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
PTBP1-220ENST00000627714 IRX6P78412 446 aaPredicted RBP26.15■■□□□ 1.78
PTBP1-220ENST00000627714 CDC42BPBQ9Y5S2 1711 aa26.14■■□□□ 1.78
PTBP1-220ENST00000627714 CARD11Q9BXL7 1154 aa26.12■■□□□ 1.77
PTBP1-220ENST00000627714 SMG6Q86US8 1419 aaKnown RBP26.12■■□□□ 1.77
PTBP1-220ENST00000627714 MAST1Q9Y2H9 1570 aa26.11■■□□□ 1.77
PTBP1-220ENST00000627714 KTN1Q86UP2 1357 aaKnown RBP26.11■■□□□ 1.77
PTBP1-220ENST00000627714 FAM135AQ9P2D6 1515 aa26.11■■□□□ 1.77
PTBP1-220ENST00000627714 HNRNPMP52272 730 aaKnown RBP eCLIP26.1■■□□□ 1.774e-7■■■■□ 20
PTBP1-220ENST00000627714 UNC13BO14795 1591 aa26.06■■□□□ 1.76
PTBP1-220ENST00000627714 POLR3GLQ9BT43 218 aa26.05■■□□□ 1.76
PTBP1-220ENST00000627714 FANCIQ9NVI1 1328 aa26.04■■□□□ 1.76
PTBP1-220ENST00000627714 E9PCH4 1651 aa26.04■■□□□ 1.76
PTBP1-220ENST00000627714 DCAF11Q8TEB1 546 aa26.02■■□□□ 1.76
PTBP1-220ENST00000627714 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms