RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 CFAP74Q9C0B2 1584 aa14.9□□□□□ -0.02
TCF4-258ENST00000627320 PHLDB1Q86UU1 1377 aa14.9□□□□□ -0.02
TCF4-258ENST00000627320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
TCF4-258ENST00000627320 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
TCF4-258ENST00000627320 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
TCF4-258ENST00000627320 C3P01024 1663 aa14.89□□□□□ -0.03
TCF4-258ENST00000627320 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
TCF4-258ENST00000627320 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
TCF4-258ENST00000627320 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
TCF4-258ENST00000627320 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
TCF4-258ENST00000627320 MYO5CQ9NQX4 1742 aa14.81□□□□□ -0.04
TCF4-258ENST00000627320 KIF14Q15058 1648 aa14.8□□□□□ -0.04
TCF4-258ENST00000627320 ABCA6Q8N139 1617 aa14.8□□□□□ -0.04
TCF4-258ENST00000627320 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
TCF4-258ENST00000627320 DIP2CQ9Y2E4 1556 aa14.78□□□□□ -0.04
TCF4-258ENST00000627320 LRRIQ1Q96JM4 1722 aa14.78□□□□□ -0.04
TCF4-258ENST00000627320 C9orf84Q5VXU9 1444 aa14.77□□□□□ -0.04
TCF4-258ENST00000627320 UHRF1BP1Q6BDS2 1440 aa14.77□□□□□ -0.04
TCF4-258ENST00000627320 SETD1BQ9UPS6 1966 aaKnown RBP14.76□□□□□ -0.05
TCF4-258ENST00000627320 ATP10AO60312 1499 aa14.76□□□□□ -0.05
TCF4-258ENST00000627320 MAGI2Q86UL8 1455 aa14.76□□□□□ -0.05
TCF4-258ENST00000627320 SUPT6HQ7KZ85 1726 aaKnown RBP14.73□□□□□ -0.05
TCF4-258ENST00000627320 PTPRTO14522 1441 aa14.73□□□□□ -0.05
TCF4-258ENST00000627320 MED1Q15648 1581 aaPredicted RBP14.73□□□□□ -0.05
TCF4-258ENST00000627320 CAMSAP1Q5T5Y3 1602 aa14.71□□□□□ -0.05
TCF4-258ENST00000627320 KDM5CP41229 1560 aa14.71□□□□□ -0.05
TCF4-258ENST00000627320 CDC42BPBQ9Y5S2 1711 aa14.71□□□□□ -0.05
TCF4-258ENST00000627320 NCOA1Q15788 1441 aa14.7□□□□□ -0.06
TCF4-258ENST00000627320 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
TCF4-258ENST00000627320 PLCH2O75038 1416 aa14.69□□□□□ -0.06
TCF4-258ENST00000627320 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
TCF4-258ENST00000627320 ZNF335Q9H4Z2 1342 aaPredicted RBP14.68□□□□□ -0.06
TCF4-258ENST00000627320 ITSN2Q9NZM3 1697 aa14.67□□□□□ -0.06
TCF4-258ENST00000627320 KIDINS220Q9ULH0 1771 aa14.66□□□□□ -0.06
TCF4-258ENST00000627320 AFAP1Q8N556 730 aa14.66□□□□□ -0.06
TCF4-258ENST00000627320 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
TCF4-258ENST00000627320 IQSEC2Q5JU85 1478 aa14.65□□□□□ -0.06
TCF4-258ENST00000627320 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
TCF4-258ENST00000627320 NCKAP5LQ9HCH0 1330 aa14.65□□□□□ -0.06
TCF4-258ENST00000627320 CLTCQ00610 1675 aaKnown RBP14.65□□□□□ -0.06
TCF4-258ENST00000627320 ADRA2BP18089 450 aa14.64□□□□□ -0.07
TCF4-258ENST00000627320 ARHGAP5Q13017 1502 aa14.64□□□□□ -0.07
TCF4-258ENST00000627320 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
TCF4-258ENST00000627320 REREQ9P2R6 1566 aa14.63□□□□□ -0.07
TCF4-258ENST00000627320 ZNF142P52746 1687 aaPredicted RBP14.62□□□□□ -0.07
TCF4-258ENST00000627320 ZNF518AQ6AHZ1 1483 aa14.62□□□□□ -0.07
TCF4-258ENST00000627320 TRAPPC8Q9Y2L5 1435 aa14.6□□□□□ -0.07
TCF4-258ENST00000627320 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
TCF4-258ENST00000627320 MROH2AA6NES4 1674 aa14.6□□□□□ -0.07
TCF4-258ENST00000627320 PREX2Q70Z35 1606 aa14.59□□□□□ -0.07
TCF4-258ENST00000627320 MYT1LQ9UL68 1186 aa14.59□□□□□ -0.07
TCF4-258ENST00000627320 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.07
TCF4-258ENST00000627320 ABCC1P33527 1531 aa14.58□□□□□ -0.08
TCF4-258ENST00000627320 HSPA1LP34931 641 aa14.58□□□□□ -0.08
TCF4-258ENST00000627320 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
TCF4-258ENST00000627320 ALKQ9UM73 1620 aa14.58□□□□□ -0.08
TCF4-258ENST00000627320 AGLP35573 1532 aa14.56□□□□□ -0.08
TCF4-258ENST00000627320 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
TCF4-258ENST00000627320 CEP170BQ9Y4F5 1589 aaPredicted RBP14.56□□□□□ -0.08
TCF4-258ENST00000627320 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
TCF4-258ENST00000627320 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
TCF4-258ENST00000627320 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
TCF4-258ENST00000627320 PIP4K2BP78356 416 aa14.54□□□□□ -0.08
TCF4-258ENST00000627320 EFCAB2Q5VUJ9 269 aa14.54□□□□□ -0.08
TCF4-258ENST00000627320 MLH3Q9UHC1 1453 aa14.53□□□□□ -0.08
TCF4-258ENST00000627320 NEURL4Q96JN8 1562 aa14.52□□□□□ -0.08
TCF4-258ENST00000627320 STRCP1A6NGW2 1772 aa14.52□□□□□ -0.09
TCF4-258ENST00000627320 TCOF1Q13428 1488 aaKnown RBP14.51□□□□□ -0.09
TCF4-258ENST00000627320 SAMD9LQ8IVG5 1584 aa14.51□□□□□ -0.09
TCF4-258ENST00000627320 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
TCF4-258ENST00000627320 DNMT1P26358 1616 aaKnown RBP14.48□□□□□ -0.09
TCF4-258ENST00000627320 SETD1AO15047 1707 aaKnown RBP14.48□□□□□ -0.09
TCF4-258ENST00000627320 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
TCF4-258ENST00000627320 SYCP2Q9BX26 1530 aa14.47□□□□□ -0.09
TCF4-258ENST00000627320 ZMYM3Q14202 1370 aa14.47□□□□□ -0.09
TCF4-258ENST00000627320 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
TCF4-258ENST00000627320 ESF1Q9H501 851 aaKnown RBP14.46□□□□□ -0.09
TCF4-258ENST00000627320 NPATQ14207 1427 aa14.46□□□□□ -0.09
TCF4-258ENST00000627320 PLXNC1O60486 1568 aa14.46□□□□□ -0.09
TCF4-258ENST00000627320 PTPRKQ15262 1439 aa14.45□□□□□ -0.1
TCF4-258ENST00000627320 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
TCF4-258ENST00000627320 VWDEQ8N2E2 1590 aa14.44□□□□□ -0.1
TCF4-258ENST00000627320 INO80Q9ULG1 1556 aaPredicted RBP14.44□□□□□ -0.1
TCF4-258ENST00000627320 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
TCF4-258ENST00000627320 XIRP1Q702N8 1843 aaKnown RBP14.4□□□□□ -0.1
TCF4-258ENST00000627320 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
TCF4-258ENST00000627320 CLIP1P30622 1438 aa14.39□□□□□ -0.11
TCF4-258ENST00000627320 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
TCF4-258ENST00000627320 RGS17Q9UGC6 210 aaPredicted RBP14.38□□□□□ -0.11
TCF4-258ENST00000627320 CPS1P31327 1500 aa14.37□□□□□ -0.11
TCF4-258ENST00000627320 ZNF777Q9ULD5 760 aaPredicted RBP14.37□□□□□ -0.11
TCF4-258ENST00000627320 FMN1Q68DA7 1419 aa14.37□□□□□ -0.11
TCF4-258ENST00000627320 A2ML1A8K2U0 1454 aa14.37□□□□□ -0.11
TCF4-258ENST00000627320 PKD2Q13563 968 aa14.36□□□□□ -0.11
TCF4-258ENST00000627320 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
TCF4-258ENST00000627320 GGT6Q6P531 493 aa14.35□□□□□ -0.11
TCF4-258ENST00000627320 A2MP01023 1474 aa14.35□□□□□ -0.11
TCF4-258ENST00000627320 IQGAP1P46940 1657 aa14.34□□□□□ -0.11
TCF4-258ENST00000627320 FBXO31Q5XUX0 539 aaPredicted RBP14.33□□□□□ -0.12
TCF4-258ENST00000627320 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms