RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 RRP1P56182 461 aaKnown RBP22.74■■□□□ 1.23
FARP1-242ENST00000627049 PNNQ9H307 717 aaKnown RBP22.73■■□□□ 1.23
FARP1-242ENST00000627049 MS4A1P11836 297 aa22.73■■□□□ 1.23
FARP1-242ENST00000627049 HSCBQ8IWL3 235 aa22.72■■□□□ 1.23
FARP1-242ENST00000627049 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
FARP1-242ENST00000627049 SPRYD3Q8NCJ5 442 aa22.71■■□□□ 1.23
FARP1-242ENST00000627049 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
FARP1-242ENST00000627049 PTMAP06454 111 aaKnown RBP22.68■■□□□ 1.22
FARP1-242ENST00000627049 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
FARP1-242ENST00000627049 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
FARP1-242ENST00000627049 KIF15Q9NS87 1388 aa22.67■■□□□ 1.22
FARP1-242ENST00000627049 SLC4A3P48751 1232 aa22.66■■□□□ 1.22
FARP1-242ENST00000627049 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
FARP1-242ENST00000627049 MSH5O43196 834 aa22.66■■□□□ 1.22
FARP1-242ENST00000627049 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
FARP1-242ENST00000627049 WASHC2AQ641Q2 1341 aa22.65■■□□□ 1.22
FARP1-242ENST00000627049 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
FARP1-242ENST00000627049 GZF1Q9H116 711 aaPredicted RBP22.65■■□□□ 1.22
FARP1-242ENST00000627049 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
FARP1-242ENST00000627049 CNTLNQ9NXG0 1405 aa22.64■■□□□ 1.22
FARP1-242ENST00000627049 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
FARP1-242ENST00000627049 DNTTIP2Q5QJE6 756 aaKnown RBP22.63■■□□□ 1.21
FARP1-242ENST00000627049 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
FARP1-242ENST00000627049 FAM161AQ3B820 660 aa22.63■■□□□ 1.21
FARP1-242ENST00000627049 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
FARP1-242ENST00000627049 GOLGA6L3A6NEY3 463 aa22.63■■□□□ 1.21
FARP1-242ENST00000627049 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
FARP1-242ENST00000627049 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
FARP1-242ENST00000627049 CENPQQ7L2Z9 268 aaPredicted RBP22.62■■□□□ 1.21
FARP1-242ENST00000627049 PLIN1O60240 522 aa22.61■■□□□ 1.21
FARP1-242ENST00000627049 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
FARP1-242ENST00000627049 MSNP26038 577 aaKnown RBP22.59■■□□□ 1.21
FARP1-242ENST00000627049 NUP155O75694 1391 aa22.59■■□□□ 1.21
FARP1-242ENST00000627049 LRRC9Q6ZRR7 1453 aa22.58■■□□□ 1.21
FARP1-242ENST00000627049 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
FARP1-242ENST00000627049 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
FARP1-242ENST00000627049 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
FARP1-242ENST00000627049 CASC1Q6TDU7 716 aa22.56■■□□□ 1.2
FARP1-242ENST00000627049 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
FARP1-242ENST00000627049 RWDD1Q9H446 243 aaPredicted RBP22.55■■□□□ 1.2
FARP1-242ENST00000627049 STAG3Q9UJ98 1225 aa22.55■■□□□ 1.2
FARP1-242ENST00000627049 USP47Q96K76 1375 aa22.55■■□□□ 1.2
FARP1-242ENST00000627049 CHMP4BQ9H444 224 aaKnown RBP22.54■■□□□ 1.2
FARP1-242ENST00000627049 ARID4BQ4LE39 1312 aaPredicted RBP22.54■■□□□ 1.2
FARP1-242ENST00000627049 FGD6Q6ZV73 1430 aa22.54■■□□□ 1.2
FARP1-242ENST00000627049 GBP4Q96PP9 640 aa22.53■■□□□ 1.2
FARP1-242ENST00000627049 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
FARP1-242ENST00000627049 PMFBP1Q8TBY8 1022 aa22.53■■□□□ 1.2
FARP1-242ENST00000627049 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
FARP1-242ENST00000627049 ANO8Q9HCE9 1232 aaPredicted RBP22.51■■□□□ 1.19
FARP1-242ENST00000627049 IGF1RP08069 1367 aa22.5■■□□□ 1.19
FARP1-242ENST00000627049 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
FARP1-242ENST00000627049 NFKBIBQ15653 356 aa22.5■■□□□ 1.19
FARP1-242ENST00000627049 PTMSP20962 102 aa22.49■■□□□ 1.19
FARP1-242ENST00000627049 IL27Q8NEV9 243 aa22.48■■□□□ 1.19
FARP1-242ENST00000627049 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
FARP1-242ENST00000627049 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
FARP1-242ENST00000627049 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
FARP1-242ENST00000627049 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.19
FARP1-242ENST00000627049 HSP90AA2PQ14568 343 aaPredicted RBP22.44■■□□□ 1.18
FARP1-242ENST00000627049 MFAP1P55081 439 aaKnown RBP22.44■■□□□ 1.18
FARP1-242ENST00000627049 CENPJQ9HC77 1338 aaPredicted RBP22.42■■□□□ 1.18
FARP1-242ENST00000627049 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
FARP1-242ENST00000627049 CCDC184Q52MB2 194 aa22.42■■□□□ 1.18
FARP1-242ENST00000627049 AKNAQ7Z591 1439 aa22.41■■□□□ 1.18
FARP1-242ENST00000627049 PANK3Q9H999 370 aa22.41■■□□□ 1.18
FARP1-242ENST00000627049 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
FARP1-242ENST00000627049 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
FARP1-242ENST00000627049 PRXQ9BXM0 1461 aa22.4■■□□□ 1.18
FARP1-242ENST00000627049 TPRNQ4KMQ1 711 aa22.38■■□□□ 1.17
FARP1-242ENST00000627049 PLCB2Q00722 1185 aa22.38■■□□□ 1.17
FARP1-242ENST00000627049 BRPF3Q9ULD4 1205 aa22.38■■□□□ 1.17
FARP1-242ENST00000627049 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
FARP1-242ENST00000627049 CLUAP1Q96AJ1 413 aa22.36■■□□□ 1.17
FARP1-242ENST00000627049 BACH2Q9BYV9 841 aa22.36■■□□□ 1.17
FARP1-242ENST00000627049 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
FARP1-242ENST00000627049 SMG6Q86US8 1419 aaKnown RBP22.36■■□□□ 1.17
FARP1-242ENST00000627049 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
FARP1-242ENST00000627049 ITPRIPQ8IWB1 547 aa22.35■■□□□ 1.17
FARP1-242ENST00000627049 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
FARP1-242ENST00000627049 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
FARP1-242ENST00000627049 BRD4O60885 1362 aaPredicted RBP22.33■■□□□ 1.17
FARP1-242ENST00000627049 VSIG10Q8N0Z9 540 aa22.33■■□□□ 1.17
FARP1-242ENST00000627049 CUX1P39880 1505 aa22.31■■□□□ 1.16
FARP1-242ENST00000627049 E9PSI1 815 aa22.3■■□□□ 1.16
FARP1-242ENST00000627049 U2AF1L5P0DN76 240 aaPredicted RBP22.3■■□□□ 1.16
FARP1-242ENST00000627049 U2AF1Q01081 240 aaKnown RBP eCLIP22.3■■□□□ 1.168e-12■□□□□ 10.7
FARP1-242ENST00000627049 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
FARP1-242ENST00000627049 PRKCSHP14314 528 aaPredicted RBP22.29■■□□□ 1.16
FARP1-242ENST00000627049 COG6Q9Y2V7 657 aa22.28■■□□□ 1.16
FARP1-242ENST00000627049 CHAF1AQ13111 956 aaPredicted RBP22.28■■□□□ 1.16
FARP1-242ENST00000627049 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
FARP1-242ENST00000627049 SMC4Q9NTJ3 1288 aa22.27■■□□□ 1.16
FARP1-242ENST00000627049 CALD1Q05682 793 aaKnown RBP22.26■■□□□ 1.15
FARP1-242ENST00000627049 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
FARP1-242ENST00000627049 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
FARP1-242ENST00000627049 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
FARP1-242ENST00000627049 FRAT2O75474 233 aaPredicted RBP22.25■■□□□ 1.15
FARP1-242ENST00000627049 NCOA2Q15596 1464 aa22.24■■□□□ 1.15
FARP1-242ENST00000627049 NBPF8Q3BBV2 869 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms