RNA–Protein interactions for RNA: ENST00000625879.2

LINC02028-224, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 421 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-224ENST00000625879 PLCH2O75038 1416 aa22.82■■□□□ 1.24
LINC02028-224ENST00000625879 SCAPERQ9BY12 1400 aa22.82■■□□□ 1.24
LINC02028-224ENST00000625879 ATP10AO60312 1499 aa22.81■■□□□ 1.24
LINC02028-224ENST00000625879 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
LINC02028-224ENST00000625879 MLECQ14165 292 aa22.79■■□□□ 1.24
LINC02028-224ENST00000625879 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
LINC02028-224ENST00000625879 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
LINC02028-224ENST00000625879 CDK13Q14004 1512 aaKnown RBP22.75■■□□□ 1.23
LINC02028-224ENST00000625879 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
LINC02028-224ENST00000625879 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
LINC02028-224ENST00000625879 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
LINC02028-224ENST00000625879 ZNF518AQ6AHZ1 1483 aa22.72■■□□□ 1.23
LINC02028-224ENST00000625879 EFCAB2Q5VUJ9 269 aa22.71■■□□□ 1.23
LINC02028-224ENST00000625879 DISP3Q9P2K9 1392 aa22.71■■□□□ 1.23
LINC02028-224ENST00000625879 UHRF1BP1Q6BDS2 1440 aa22.71■■□□□ 1.23
LINC02028-224ENST00000625879 KDM5CP41229 1560 aa22.69■■□□□ 1.22
LINC02028-224ENST00000625879 SOCS7O14512 581 aa22.68■■□□□ 1.22
LINC02028-224ENST00000625879 REREQ9P2R6 1566 aa22.67■■□□□ 1.22
LINC02028-224ENST00000625879 CEBPAP49715 358 aaPredicted RBP22.65■■□□□ 1.22
LINC02028-224ENST00000625879 PTPRTO14522 1441 aa22.65■■□□□ 1.22
LINC02028-224ENST00000625879 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
LINC02028-224ENST00000625879 ILDR2Q71H61 639 aa22.64■■□□□ 1.21
LINC02028-224ENST00000625879 CDK11AQ9UQ88 783 aaPredicted RBP22.64■■□□□ 1.21
LINC02028-224ENST00000625879 KIF14Q15058 1648 aa22.64■■□□□ 1.21
LINC02028-224ENST00000625879 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
LINC02028-224ENST00000625879 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
LINC02028-224ENST00000625879 SPATA31D1Q6ZQQ2 1576 aa22.6■■□□□ 1.21
LINC02028-224ENST00000625879 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
LINC02028-224ENST00000625879 C3P01024 1663 aa22.58■■□□□ 1.21
LINC02028-224ENST00000625879 TROQ12816 1431 aaPredicted RBP22.58■■□□□ 1.21
LINC02028-224ENST00000625879 AGLP35573 1532 aa22.58■■□□□ 1.21
LINC02028-224ENST00000625879 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.2
LINC02028-224ENST00000625879 CLIP1P30622 1438 aa22.57■■□□□ 1.2
LINC02028-224ENST00000625879 AFAP1Q8N556 730 aa22.56■■□□□ 1.2
LINC02028-224ENST00000625879 ABCA6Q8N139 1617 aa22.55■■□□□ 1.2
LINC02028-224ENST00000625879 LTBP4Q8N2S1 1624 aa22.54■■□□□ 1.2
LINC02028-224ENST00000625879 TRAPPC8Q9Y2L5 1435 aa22.54■■□□□ 1.2
LINC02028-224ENST00000625879 CNTLNQ9NXG0 1405 aa22.52■■□□□ 1.2
LINC02028-224ENST00000625879 ESF1Q9H501 851 aaKnown RBP22.51■■□□□ 1.19
LINC02028-224ENST00000625879 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
LINC02028-224ENST00000625879 NCOA1Q15788 1441 aa22.5■■□□□ 1.19
LINC02028-224ENST00000625879 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
LINC02028-224ENST00000625879 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
LINC02028-224ENST00000625879 CDC42BPBQ9Y5S2 1711 aa22.5■■□□□ 1.19
LINC02028-224ENST00000625879 ABCC1P33527 1531 aa22.49■■□□□ 1.19
LINC02028-224ENST00000625879 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
LINC02028-224ENST00000625879 NPATQ14207 1427 aa22.46■■□□□ 1.19
LINC02028-224ENST00000625879 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
LINC02028-224ENST00000625879 MROH2AA6NES4 1674 aa22.45■■□□□ 1.18
LINC02028-224ENST00000625879 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
LINC02028-224ENST00000625879 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
LINC02028-224ENST00000625879 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
LINC02028-224ENST00000625879 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
LINC02028-224ENST00000625879 CCDC18Q5T9S5 1454 aa22.39■■□□□ 1.17
LINC02028-224ENST00000625879 PLA2R1Q13018 1463 aa22.34■■□□□ 1.17
LINC02028-224ENST00000625879 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
LINC02028-224ENST00000625879 ZNF142P52746 1687 aaPredicted RBP22.34■■□□□ 1.17
LINC02028-224ENST00000625879 SAMD9LQ8IVG5 1584 aa22.33■■□□□ 1.17
LINC02028-224ENST00000625879 ZMYM3Q14202 1370 aa22.33■■□□□ 1.17
LINC02028-224ENST00000625879 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
LINC02028-224ENST00000625879 PKD2Q13563 968 aa22.3■■□□□ 1.16
LINC02028-224ENST00000625879 MYO3AQ8NEV4 1616 aa22.3■■□□□ 1.16
LINC02028-224ENST00000625879 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
LINC02028-224ENST00000625879 PLXNC1O60486 1568 aa22.28■■□□□ 1.16
LINC02028-224ENST00000625879 ZNF335Q9H4Z2 1342 aaPredicted RBP22.28■■□□□ 1.16
LINC02028-224ENST00000625879 UBAP1LF5GYI3 381 aa22.27■■□□□ 1.16
LINC02028-224ENST00000625879 CEP170BQ9Y4F5 1589 aaPredicted RBP22.27■■□□□ 1.16
LINC02028-224ENST00000625879 SYCP2Q9BX26 1530 aa22.26■■□□□ 1.15
LINC02028-224ENST00000625879 SPAG9O60271 1321 aaKnown RBP22.26■■□□□ 1.15
LINC02028-224ENST00000625879 SUPT6HQ7KZ85 1726 aaKnown RBP22.26■■□□□ 1.15
LINC02028-224ENST00000625879 CLTCQ00610 1675 aaKnown RBP22.25■■□□□ 1.15
LINC02028-224ENST00000625879 ATP7AQ04656 1500 aa22.25■■□□□ 1.15
LINC02028-224ENST00000625879 NCKAP5LQ9HCH0 1330 aa22.25■■□□□ 1.15
LINC02028-224ENST00000625879 INO80Q9ULG1 1556 aaPredicted RBP22.24■■□□□ 1.15
LINC02028-224ENST00000625879 PTPRKQ15262 1439 aa22.23■■□□□ 1.15
LINC02028-224ENST00000625879 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
LINC02028-224ENST00000625879 PLEKHH2Q8IVE3 1493 aa22.23■■□□□ 1.15
LINC02028-224ENST00000625879 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
LINC02028-224ENST00000625879 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
LINC02028-224ENST00000625879 A2MP01023 1474 aa22.22■■□□□ 1.15
LINC02028-224ENST00000625879 GPATCH8Q9UKJ3 1502 aaKnown RBP22.21■■□□□ 1.15
LINC02028-224ENST00000625879 PPP6R1Q9UPN7 881 aa22.21■■□□□ 1.15
LINC02028-224ENST00000625879 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
LINC02028-224ENST00000625879 A2ML1A8K2U0 1454 aa22.15■■□□□ 1.14
LINC02028-224ENST00000625879 ADGBQ8N7X0 1667 aa22.15■■□□□ 1.14
LINC02028-224ENST00000625879 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
LINC02028-224ENST00000625879 CPS1P31327 1500 aa22.13■■□□□ 1.13
LINC02028-224ENST00000625879 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
LINC02028-224ENST00000625879 GGT6Q6P531 493 aa22.11■■□□□ 1.13
LINC02028-224ENST00000625879 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
LINC02028-224ENST00000625879 MED1Q15648 1581 aaPredicted RBP22.11■■□□□ 1.13
LINC02028-224ENST00000625879 POLR1AO95602 1720 aaPredicted RBP22.1■■□□□ 1.13
LINC02028-224ENST00000625879 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
LINC02028-224ENST00000625879 FAM135AQ9P2D6 1515 aa22.08■■□□□ 1.13
LINC02028-224ENST00000625879 TOM1O60784 492 aa22.07■■□□□ 1.12
LINC02028-224ENST00000625879 NEURL4Q96JN8 1562 aa22.06■■□□□ 1.12
LINC02028-224ENST00000625879 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
LINC02028-224ENST00000625879 SHANK2Q9UPX8 1470 aa22.05■■□□□ 1.12
LINC02028-224ENST00000625879 HSPA1LP34931 641 aa22.05■■□□□ 1.12
LINC02028-224ENST00000625879 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms