RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-210ENST00000625282 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-210ENST00000625282 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-210ENST00000625282 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
SPTAN1-210ENST00000625282 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
SPTAN1-210ENST00000625282 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
SPTAN1-210ENST00000625282 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
SPTAN1-210ENST00000625282 CARMIL2Q6F5E8 1435 aa11.94□□□□□ -0.5
SPTAN1-210ENST00000625282 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
SPTAN1-210ENST00000625282 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-210ENST00000625282 RRP7BPQ9NSQ0 103 aa11.94□□□□□ -0.5
SPTAN1-210ENST00000625282 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
SPTAN1-210ENST00000625282 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
SPTAN1-210ENST00000625282 HSPA5P11021 654 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-210ENST00000625282 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-210ENST00000625282 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
SPTAN1-210ENST00000625282 KIF21BO75037 1637 aa11.91□□□□□ -0.5
SPTAN1-210ENST00000625282 FRAT2O75474 233 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-210ENST00000625282 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPTAN1-210ENST00000625282 TRHP20396 242 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-210ENST00000625282 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
SPTAN1-210ENST00000625282 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-210ENST00000625282 BACH2Q9BYV9 841 aa11.9□□□□□ -0.5
SPTAN1-210ENST00000625282 EXOC6Q8TAG9 804 aa11.9□□□□□ -0.5
SPTAN1-210ENST00000625282 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
SPTAN1-210ENST00000625282 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
SPTAN1-210ENST00000625282 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
SPTAN1-210ENST00000625282 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-210ENST00000625282 RRBP1Q9P2E9 1410 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-210ENST00000625282 ZNF326Q5BKZ1 582 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-210ENST00000625282 SNAPC4Q5SXM2 1469 aa11.88□□□□□ -0.51
SPTAN1-210ENST00000625282 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
SPTAN1-210ENST00000625282 BIVM-ERCC5R4GMW8 1640 aa11.87□□□□□ -0.51
SPTAN1-210ENST00000625282 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
SPTAN1-210ENST00000625282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.512e-7■■■□□ 15.7
SPTAN1-210ENST00000625282 CYB5RLQ6IPT4 315 aa11.86□□□□□ -0.51
SPTAN1-210ENST00000625282 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
SPTAN1-210ENST00000625282 SKAP1Q86WV1 359 aa11.85□□□□□ -0.51
SPTAN1-210ENST00000625282 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-210ENST00000625282 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
SPTAN1-210ENST00000625282 RRAGDQ9NQL2 400 aaPredicted RBP11.84□□□□□ -0.51
SPTAN1-210ENST00000625282 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
SPTAN1-210ENST00000625282 MS4A1P11836 297 aa11.83□□□□□ -0.52
SPTAN1-210ENST00000625282 L1TD1Q5T7N2 865 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-210ENST00000625282 PTPRGP23470 1445 aa11.82□□□□□ -0.52
SPTAN1-210ENST00000625282 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
SPTAN1-210ENST00000625282 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-210ENST00000625282 POGKQ9P215 609 aa11.79□□□□□ -0.52
SPTAN1-210ENST00000625282 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-210ENST00000625282 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-210ENST00000625282 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-210ENST00000625282 RGS3P49796 1198 aa11.78□□□□□ -0.52
SPTAN1-210ENST00000625282 RCAN3Q9UKA8 241 aa11.78□□□□□ -0.52
SPTAN1-210ENST00000625282 CNTLNQ9NXG0 1405 aa11.76□□□□□ -0.53
SPTAN1-210ENST00000625282 PLIN1O60240 522 aa11.75□□□□□ -0.53
SPTAN1-210ENST00000625282 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-210ENST00000625282 RBM10P98175 930 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-210ENST00000625282 PRG4Q92954 1404 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-210ENST00000625282 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
SPTAN1-210ENST00000625282 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-210ENST00000625282 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
SPTAN1-210ENST00000625282 ARID3AQ99856 593 aa11.74□□□□□ -0.53
SPTAN1-210ENST00000625282 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-210ENST00000625282 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
SPTAN1-210ENST00000625282 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
SPTAN1-210ENST00000625282 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
SPTAN1-210ENST00000625282 BECN1Q14457 450 aa11.7□□□□□ -0.54
SPTAN1-210ENST00000625282 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
SPTAN1-210ENST00000625282 CCDC7Q96M83 1385 aa11.7□□□□□ -0.54
SPTAN1-210ENST00000625282 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
SPTAN1-210ENST00000625282 CUL7Q14999 1698 aa11.7□□□□□ -0.54
SPTAN1-210ENST00000625282 HNRNPMP52272 730 aaKnown RBP eCLIP11.7□□□□□ -0.544e-6■■■■□ 23.6
SPTAN1-210ENST00000625282 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 MAGI1Q96QZ7 1491 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 PHLDB1Q86UU1 1377 aa11.69□□□□□ -0.54
SPTAN1-210ENST00000625282 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
SPTAN1-210ENST00000625282 CLCN1P35523 988 aa11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 MYH16Q9H6N6 1097 aa11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 EFCAB2Q5VUJ9 269 aa11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 LRRC9Q6ZRR7 1453 aa11.67□□□□□ -0.54
SPTAN1-210ENST00000625282 EFCAB5A4FU69 1503 aa11.66□□□□□ -0.54
SPTAN1-210ENST00000625282 PANK2Q9BZ23 570 aa11.66□□□□□ -0.54
SPTAN1-210ENST00000625282 WDR62O43379 1518 aa11.66□□□□□ -0.54
SPTAN1-210ENST00000625282 L3MBTL2Q969R5 705 aa11.66□□□□□ -0.54
SPTAN1-210ENST00000625282 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
SPTAN1-210ENST00000625282 FOXD1Q16676 465 aa11.65□□□□□ -0.55
SPTAN1-210ENST00000625282 SENP3Q9H4L4 574 aaPredicted RBP11.65□□□□□ -0.55
SPTAN1-210ENST00000625282 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPTAN1-210ENST00000625282 FYCO1Q9BQS8 1478 aa11.64□□□□□ -0.55
SPTAN1-210ENST00000625282 PDE4CQ08493 712 aa11.64□□□□□ -0.55
SPTAN1-210ENST00000625282 RGL3Q3MIN7 710 aa11.63□□□□□ -0.55
SPTAN1-210ENST00000625282 PDCL3Q9H2J4 239 aa11.63□□□□□ -0.55
SPTAN1-210ENST00000625282 ESPNB1AK53 854 aa11.62□□□□□ -0.55
SPTAN1-210ENST00000625282 FAM13BQ9NYF5 915 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms