RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 PEG3Q9GZU2 1588 aa9.66□□□□□ -0.86
SRSF4-207ENST00000622143 SEC24BO95487 1268 aa9.65□□□□□ -0.86
SRSF4-207ENST00000622143 ILDR1Q86SU0 546 aaPredicted RBP9.65□□□□□ -0.86
SRSF4-207ENST00000622143 CEP164Q9UPV0 1460 aa9.65□□□□□ -0.87
SRSF4-207ENST00000622143 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
SRSF4-207ENST00000622143 ARHGEF11O15085 1522 aa9.63□□□□□ -0.87
SRSF4-207ENST00000622143 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
SRSF4-207ENST00000622143 OCEL1Q9H607 264 aa9.63□□□□□ -0.87
SRSF4-207ENST00000622143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
SRSF4-207ENST00000622143 RGL2O15211 777 aa9.62□□□□□ -0.87
SRSF4-207ENST00000622143 PLCG2P16885 1265 aa9.62□□□□□ -0.87
SRSF4-207ENST00000622143 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
SRSF4-207ENST00000622143 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
SRSF4-207ENST00000622143 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
SRSF4-207ENST00000622143 FANCD2Q9BXW9 1451 aa9.61□□□□□ -0.87
SRSF4-207ENST00000622143 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
SRSF4-207ENST00000622143 URB2Q14146 1524 aaKnown RBP9.58□□□□□ -0.88
SRSF4-207ENST00000622143 GOLGA2Q08379 1002 aa9.58□□□□□ -0.88
SRSF4-207ENST00000622143 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
SRSF4-207ENST00000622143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.57□□□□□ -0.888e-7■□□□□ 10.9
SRSF4-207ENST00000622143 WIZO95785 1651 aa9.57□□□□□ -0.88
SRSF4-207ENST00000622143 ZNF608Q9ULD9 1512 aaPredicted RBP9.55□□□□□ -0.88
SRSF4-207ENST00000622143 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
SRSF4-207ENST00000622143 DPY19L2Q6NUT2 758 aa9.52□□□□□ -0.89
SRSF4-207ENST00000622143 BCL11BQ9C0K0 894 aaPredicted RBP9.52□□□□□ -0.89
SRSF4-207ENST00000622143 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
SRSF4-207ENST00000622143 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
SRSF4-207ENST00000622143 STK25O00506 426 aa9.48□□□□□ -0.89
SRSF4-207ENST00000622143 SOX12O15370 315 aa9.48□□□□□ -0.89
SRSF4-207ENST00000622143 MS4A4AQ96JQ5 239 aa9.48□□□□□ -0.89
SRSF4-207ENST00000622143 STK24Q9Y6E0 443 aa9.48□□□□□ -0.89
SRSF4-207ENST00000622143 CHD1O14646 1710 aa9.48□□□□□ -0.89
SRSF4-207ENST00000622143 CFTRP13569 1480 aa9.47□□□□□ -0.89
SRSF4-207ENST00000622143 SLAIN1Q8ND83 568 aa9.46□□□□□ -0.9
SRSF4-207ENST00000622143 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
SRSF4-207ENST00000622143 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
SRSF4-207ENST00000622143 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.9
SRSF4-207ENST00000622143 FBXO22Q8NEZ5 403 aa9.45□□□□□ -0.9
SRSF4-207ENST00000622143 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
SRSF4-207ENST00000622143 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
SRSF4-207ENST00000622143 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-207ENST00000622143 MFRPQ9BY79 579 aa9.44□□□□□ -0.9
SRSF4-207ENST00000622143 IFT140Q96RY7 1462 aa9.44□□□□□ -0.9
SRSF4-207ENST00000622143 CHGAP10645 457 aaKnown RBP9.42□□□□□ -0.9
SRSF4-207ENST00000622143 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
SRSF4-207ENST00000622143 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
SRSF4-207ENST00000622143 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
SRSF4-207ENST00000622143 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.97e-23■□□□□ 11.3
SRSF4-207ENST00000622143 POTEB3A0JP26 581 aa9.39□□□□□ -0.91
SRSF4-207ENST00000622143 NLRP6P59044 892 aa9.39□□□□□ -0.91
SRSF4-207ENST00000622143 POTEBQ6S5H4 581 aa9.39□□□□□ -0.91
SRSF4-207ENST00000622143 TOPBP1Q92547 1522 aa9.39□□□□□ -0.91
SRSF4-207ENST00000622143 C3orf67Q6ZVT6 689 aa9.38□□□□□ -0.91
SRSF4-207ENST00000622143 MICALL2Q8IY33 904 aa9.37□□□□□ -0.91
SRSF4-207ENST00000622143 RSF1Q96T23 1441 aaPredicted RBP9.36□□□□□ -0.91
SRSF4-207ENST00000622143 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
SRSF4-207ENST00000622143 TOP2AP11388 1531 aaKnown RBP9.35□□□□□ -0.91
SRSF4-207ENST00000622143 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
SRSF4-207ENST00000622143 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
SRSF4-207ENST00000622143 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
SRSF4-207ENST00000622143 TMEM92Q6UXU6 159 aa9.33□□□□□ -0.92
SRSF4-207ENST00000622143 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
SRSF4-207ENST00000622143 G3V3G9 751 aa9.31□□□□□ -0.92
SRSF4-207ENST00000622143 PLCB2Q00722 1185 aa9.31□□□□□ -0.92
SRSF4-207ENST00000622143 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.31□□□□□ -0.92
SRSF4-207ENST00000622143 CLASP1Q7Z460 1538 aa9.31□□□□□ -0.92
SRSF4-207ENST00000622143 DNMBPQ6XZF7 1577 aa9.3□□□□□ -0.92
SRSF4-207ENST00000622143 SNAPC4Q5SXM2 1469 aa9.3□□□□□ -0.92
SRSF4-207ENST00000622143 RAD54L2Q9Y4B4 1467 aa9.3□□□□□ -0.92
SRSF4-207ENST00000622143 TDRD9Q8NDG6 1382 aaKnown RBP9.3□□□□□ -0.92
SRSF4-207ENST00000622143 PPP1R37O75864 691 aa9.29□□□□□ -0.92
SRSF4-207ENST00000622143 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
SRSF4-207ENST00000622143 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
SRSF4-207ENST00000622143 POLA1P09884 1462 aaPredicted RBP9.27□□□□□ -0.93
SRSF4-207ENST00000622143 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
SRSF4-207ENST00000622143 GAPVD1Q14C86 1478 aa9.26□□□□□ -0.93
SRSF4-207ENST00000622143 SYNJ1O43426 1573 aa9.25□□□□□ -0.93
SRSF4-207ENST00000622143 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
SRSF4-207ENST00000622143 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
SRSF4-207ENST00000622143 SNPHO15079 494 aa9.24□□□□□ -0.93
SRSF4-207ENST00000622143 ABCC8Q09428 1581 aa9.23□□□□□ -0.93
SRSF4-207ENST00000622143 ERCC6L2Q5T890 1561 aa9.22□□□□□ -0.93
SRSF4-207ENST00000622143 KIF3CO14782 793 aa9.22□□□□□ -0.93
SRSF4-207ENST00000622143 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
SRSF4-207ENST00000622143 HAP1P54257 671 aaPredicted RBP9.21□□□□□ -0.94
SRSF4-207ENST00000622143 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
SRSF4-207ENST00000622143 SOGA1O94964 1423 aa9.21□□□□□ -0.94
SRSF4-207ENST00000622143 EMP3P54852 163 aa9.19□□□□□ -0.94
SRSF4-207ENST00000622143 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
SRSF4-207ENST00000622143 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
SRSF4-207ENST00000622143 FGD5Q6ZNL6 1462 aa9.18□□□□□ -0.94
SRSF4-207ENST00000622143 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
SRSF4-207ENST00000622143 MAGI1Q96QZ7 1491 aaPredicted RBP9.16□□□□□ -0.94
SRSF4-207ENST00000622143 C2orf72A6NCS6 295 aa9.16□□□□□ -0.94
SRSF4-207ENST00000622143 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
SRSF4-207ENST00000622143 GRIN2BQ13224 1484 aa9.15□□□□□ -0.94
SRSF4-207ENST00000622143 KIF13AQ9H1H9 1805 aa9.15□□□□□ -0.94
SRSF4-207ENST00000622143 PBRM1Q86U86 1689 aa9.15□□□□□ -0.94
SRSF4-207ENST00000622143 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
SRSF4-207ENST00000622143 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms