RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.53
ITSN2-213ENST00000622089 RWDD1Q9H446 243 aaPredicted RBP11.77□□□□□ -0.53
ITSN2-213ENST00000622089 GNL2Q13823 731 aaKnown RBP11.77□□□□□ -0.53
ITSN2-213ENST00000622089 USP35Q9P2H5 1018 aa11.77□□□□□ -0.53
ITSN2-213ENST00000622089 MORC1Q86VD1 984 aa11.76□□□□□ -0.53
ITSN2-213ENST00000622089 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
ITSN2-213ENST00000622089 CSPP1Q1MSJ5 1256 aa11.76□□□□□ -0.53
ITSN2-213ENST00000622089 SIN3AQ96ST3 1273 aa11.75□□□□□ -0.53
ITSN2-213ENST00000622089 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
ITSN2-213ENST00000622089 RALBP1Q15311 655 aa11.74□□□□□ -0.53
ITSN2-213ENST00000622089 PMFBP1Q8TBY8 1022 aa11.74□□□□□ -0.53
ITSN2-213ENST00000622089 SETD5Q9C0A6 1442 aa11.74□□□□□ -0.53
ITSN2-213ENST00000622089 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
ITSN2-213ENST00000622089 CCDC34Q96HJ3 373 aa11.73□□□□□ -0.53
ITSN2-213ENST00000622089 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
ITSN2-213ENST00000622089 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
ITSN2-213ENST00000622089 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
ITSN2-213ENST00000622089 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
ITSN2-213ENST00000622089 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
ITSN2-213ENST00000622089 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.53
ITSN2-213ENST00000622089 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.54
ITSN2-213ENST00000622089 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
ITSN2-213ENST00000622089 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
ITSN2-213ENST00000622089 HDAC5Q9UQL6 1122 aa11.7□□□□□ -0.54
ITSN2-213ENST00000622089 NOC3LQ8WTT2 800 aaKnown RBP11.7□□□□□ -0.54
ITSN2-213ENST00000622089 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
ITSN2-213ENST00000622089 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
ITSN2-213ENST00000622089 GPATCH3Q96I76 525 aa11.69□□□□□ -0.54
ITSN2-213ENST00000622089 CLSTN1O94985 981 aa11.69□□□□□ -0.54
ITSN2-213ENST00000622089 HSPA5P11021 654 aaKnown RBP11.69□□□□□ -0.54
ITSN2-213ENST00000622089 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
ITSN2-213ENST00000622089 NACADO15069 1562 aa11.69□□□□□ -0.54
ITSN2-213ENST00000622089 PHF14O94880 888 aa11.69□□□□□ -0.54
ITSN2-213ENST00000622089 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
ITSN2-213ENST00000622089 TNNT3P45378 269 aaPredicted RBP11.67□□□□□ -0.54
ITSN2-213ENST00000622089 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
ITSN2-213ENST00000622089 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
ITSN2-213ENST00000622089 HMMRO75330 724 aa11.65□□□□□ -0.54
ITSN2-213ENST00000622089 PHLDB1Q86UU1 1377 aa11.65□□□□□ -0.54
ITSN2-213ENST00000622089 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
ITSN2-213ENST00000622089 ROCK2O75116 1388 aaKnown RBP11.64□□□□□ -0.55
ITSN2-213ENST00000622089 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
ITSN2-213ENST00000622089 DDX11L8A8MPP1 907 aa11.63□□□□□ -0.55
ITSN2-213ENST00000622089 BAZ1AQ9NRL2 1556 aaPredicted RBP11.63□□□□□ -0.55
ITSN2-213ENST00000622089 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
ITSN2-213ENST00000622089 CHMP4CQ96CF2 233 aa11.62□□□□□ -0.55
ITSN2-213ENST00000622089 SPAG9O60271 1321 aaKnown RBP11.62□□□□□ -0.55
ITSN2-213ENST00000622089 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
ITSN2-213ENST00000622089 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
ITSN2-213ENST00000622089 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
ITSN2-213ENST00000622089 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
ITSN2-213ENST00000622089 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
ITSN2-213ENST00000622089 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
ITSN2-213ENST00000622089 ST18O60284 1047 aa11.6□□□□□ -0.55
ITSN2-213ENST00000622089 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
ITSN2-213ENST00000622089 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
ITSN2-213ENST00000622089 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
ITSN2-213ENST00000622089 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
ITSN2-213ENST00000622089 A0A0U1RQG5 324 aaPredicted RBP11.59□□□□□ -0.55
ITSN2-213ENST00000622089 SETQ01105 290 aaPredicted RBP11.59□□□□□ -0.55
ITSN2-213ENST00000622089 TPM3P06753 285 aa11.59□□□□□ -0.55
ITSN2-213ENST00000622089 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
ITSN2-213ENST00000622089 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.55
ITSN2-213ENST00000622089 SKOR2Q2VWA4 1001 aaPredicted RBP11.59□□□□□ -0.55
ITSN2-213ENST00000622089 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
ITSN2-213ENST00000622089 PKD2Q13563 968 aa11.58□□□□□ -0.56
ITSN2-213ENST00000622089 APBB1O00213 710 aa11.57□□□□□ -0.56
ITSN2-213ENST00000622089 ANKRD30AQ9BXX3 1397 aa11.57□□□□□ -0.56
ITSN2-213ENST00000622089 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
ITSN2-213ENST00000622089 CUX2O14529 1486 aa11.57□□□□□ -0.56
ITSN2-213ENST00000622089 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
ITSN2-213ENST00000622089 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
ITSN2-213ENST00000622089 CARMIL2Q6F5E8 1435 aa11.56□□□□□ -0.56
ITSN2-213ENST00000622089 GORABQ5T7V8 394 aa11.56□□□□□ -0.56
ITSN2-213ENST00000622089 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
ITSN2-213ENST00000622089 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
ITSN2-213ENST00000622089 FMN1Q68DA7 1419 aa11.56□□□□□ -0.56
ITSN2-213ENST00000622089 TRIM6-TRIM34B2RNG4 842 aa11.55□□□□□ -0.56
ITSN2-213ENST00000622089 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
ITSN2-213ENST00000622089 ATP6V1DQ9Y5K8 247 aa11.55□□□□□ -0.56
ITSN2-213ENST00000622089 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
ITSN2-213ENST00000622089 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
ITSN2-213ENST00000622089 GPS2Q13227 327 aa11.54□□□□□ -0.56
ITSN2-213ENST00000622089 NLRP13Q86W25 1043 aa11.54□□□□□ -0.56
ITSN2-213ENST00000622089 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
ITSN2-213ENST00000622089 CENPQQ7L2Z9 268 aaPredicted RBP11.53□□□□□ -0.56
ITSN2-213ENST00000622089 MPHOSPH9Q99550 1183 aa11.53□□□□□ -0.56
ITSN2-213ENST00000622089 RAB3GAP2Q9H2M9 1393 aa11.53□□□□□ -0.56
ITSN2-213ENST00000622089 RASSF8Q8NHQ8 419 aa11.53□□□□□ -0.56
ITSN2-213ENST00000622089 SOX12O15370 315 aa11.52□□□□□ -0.56
ITSN2-213ENST00000622089 HSP90AA2PQ14568 343 aaPredicted RBP11.52□□□□□ -0.57
ITSN2-213ENST00000622089 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
ITSN2-213ENST00000622089 CCDC70Q6NSX1 233 aa11.52□□□□□ -0.57
ITSN2-213ENST00000622089 TPM2P07951 284 aa11.52□□□□□ -0.57
ITSN2-213ENST00000622089 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
ITSN2-213ENST00000622089 NUP155O75694 1391 aa11.51□□□□□ -0.57
ITSN2-213ENST00000622089 TPM1P09493 284 aa11.5□□□□□ -0.57
ITSN2-213ENST00000622089 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
ITSN2-213ENST00000622089 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
ITSN2-213ENST00000622089 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms