RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 CDK13Q14004 1512 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-223ENST00000620507 SNAPC4Q5SXM2 1469 aa12.51□□□□□ -0.41
RBFOX1-223ENST00000620507 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
RBFOX1-223ENST00000620507 CFAP43Q8NDM7 1665 aa12.5□□□□□ -0.41
RBFOX1-223ENST00000620507 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
RBFOX1-223ENST00000620507 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
RBFOX1-223ENST00000620507 PTPRKQ15262 1439 aa12.48□□□□□ -0.41
RBFOX1-223ENST00000620507 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
RBFOX1-223ENST00000620507 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
RBFOX1-223ENST00000620507 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.41
RBFOX1-223ENST00000620507 PTPRGP23470 1445 aa12.46□□□□□ -0.41
RBFOX1-223ENST00000620507 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
RBFOX1-223ENST00000620507 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
RBFOX1-223ENST00000620507 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
RBFOX1-223ENST00000620507 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-223ENST00000620507 TROQ12816 1431 aaPredicted RBP12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 WASHC2AQ641Q2 1341 aa12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 DAPK1P53355 1430 aa12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 KIF21AQ7Z4S6 1674 aa12.43□□□□□ -0.42
RBFOX1-223ENST00000620507 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
RBFOX1-223ENST00000620507 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
RBFOX1-223ENST00000620507 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
RBFOX1-223ENST00000620507 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
RBFOX1-223ENST00000620507 ROCK1Q13464 1354 aa12.4□□□□□ -0.43
RBFOX1-223ENST00000620507 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-223ENST00000620507 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
RBFOX1-223ENST00000620507 NBPF8Q3BBV2 869 aa12.38□□□□□ -0.43
RBFOX1-223ENST00000620507 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
RBFOX1-223ENST00000620507 PLB1Q6P1J6 1458 aa12.38□□□□□ -0.43
RBFOX1-223ENST00000620507 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
RBFOX1-223ENST00000620507 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
RBFOX1-223ENST00000620507 ABCC5O15440 1437 aa12.37□□□□□ -0.43
RBFOX1-223ENST00000620507 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
RBFOX1-223ENST00000620507 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-223ENST00000620507 USP47Q96K76 1375 aa12.37□□□□□ -0.43
RBFOX1-223ENST00000620507 MAGI1Q96QZ7 1491 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-223ENST00000620507 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
RBFOX1-223ENST00000620507 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
RBFOX1-223ENST00000620507 KIF15Q9NS87 1388 aa12.36□□□□□ -0.43
RBFOX1-223ENST00000620507 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
RBFOX1-223ENST00000620507 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
RBFOX1-223ENST00000620507 AKNAQ7Z591 1439 aa12.35□□□□□ -0.43
RBFOX1-223ENST00000620507 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
RBFOX1-223ENST00000620507 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
RBFOX1-223ENST00000620507 ANKRD30BQ9BXX2 1392 aa12.34□□□□□ -0.43
RBFOX1-223ENST00000620507 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.44
RBFOX1-223ENST00000620507 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-223ENST00000620507 TCOF1Q13428 1488 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-223ENST00000620507 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
RBFOX1-223ENST00000620507 CCDC144AA2RUR9 1427 aa12.32□□□□□ -0.44
RBFOX1-223ENST00000620507 TMF1P82094 1093 aa12.31□□□□□ -0.44
RBFOX1-223ENST00000620507 WDR62O43379 1518 aa12.31□□□□□ -0.44
RBFOX1-223ENST00000620507 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
RBFOX1-223ENST00000620507 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
RBFOX1-223ENST00000620507 CC2D1BQ5T0F9 858 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-223ENST00000620507 WDR43Q15061 677 aaKnown RBP eCLIP12.31□□□□□ -0.44
RBFOX1-223ENST00000620507 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
RBFOX1-223ENST00000620507 NCOA1Q15788 1441 aa12.3□□□□□ -0.44
RBFOX1-223ENST00000620507 B4GALNT3Q6L9W6 998 aa12.3□□□□□ -0.44
RBFOX1-223ENST00000620507 CDCA8Q53HL2 280 aa12.3□□□□□ -0.44
RBFOX1-223ENST00000620507 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
RBFOX1-223ENST00000620507 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
RBFOX1-223ENST00000620507 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
RBFOX1-223ENST00000620507 ERICH6BQ5W0A0 696 aa12.29□□□□□ -0.44
RBFOX1-223ENST00000620507 RALBP1Q15311 655 aa12.28□□□□□ -0.44
RBFOX1-223ENST00000620507 C11orf95C9JLR9 678 aaPredicted RBP12.28□□□□□ -0.44
RBFOX1-223ENST00000620507 SPAG9O60271 1321 aaKnown RBP12.28□□□□□ -0.44
RBFOX1-223ENST00000620507 KIAA0556O60303 1618 aa12.28□□□□□ -0.44
RBFOX1-223ENST00000620507 RPRD2Q5VT52 1461 aaKnown RBP12.28□□□□□ -0.44
RBFOX1-223ENST00000620507 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.44
RBFOX1-223ENST00000620507 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.44
RBFOX1-223ENST00000620507 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.44
RBFOX1-223ENST00000620507 ARHGEF11O15085 1522 aa12.27□□□□□ -0.45
RBFOX1-223ENST00000620507 DISP1Q96F81 1524 aa12.27□□□□□ -0.45
RBFOX1-223ENST00000620507 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.45
RBFOX1-223ENST00000620507 KANK1Q14678 1352 aa12.26□□□□□ -0.45
RBFOX1-223ENST00000620507 KTN1Q86UP2 1357 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-223ENST00000620507 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
RBFOX1-223ENST00000620507 ANP32AP39687 249 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-223ENST00000620507 CCDC184Q52MB2 194 aa12.26□□□□□ -0.45
RBFOX1-223ENST00000620507 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
RBFOX1-223ENST00000620507 KIF3BO15066 747 aa12.24□□□□□ -0.45
RBFOX1-223ENST00000620507 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
RBFOX1-223ENST00000620507 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
RBFOX1-223ENST00000620507 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
RBFOX1-223ENST00000620507 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-223ENST00000620507 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-223ENST00000620507 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
RBFOX1-223ENST00000620507 KIF14Q15058 1648 aa12.21□□□□□ -0.45
RBFOX1-223ENST00000620507 ATP10BO94823 1461 aa12.2□□□□□ -0.46
RBFOX1-223ENST00000620507 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
RBFOX1-223ENST00000620507 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
RBFOX1-223ENST00000620507 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-223ENST00000620507 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
RBFOX1-223ENST00000620507 PANK3Q9H999 370 aa12.18□□□□□ -0.46
RBFOX1-223ENST00000620507 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms