RNA–Protein interactions for RNA: ENST00000620262.1

PCDH18-208, Transcript of protocadherin 18, humanhuman

TSL 4

Gene PCDH18, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-208ENST00000620262 ATP10BO94823 1461 aa14.15□□□□□ -0.14
PCDH18-208ENST00000620262 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
PCDH18-208ENST00000620262 RICTORQ6R327 1708 aa14.13□□□□□ -0.15
PCDH18-208ENST00000620262 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
PCDH18-208ENST00000620262 FHOD3Q2V2M9 1422 aa14.12□□□□□ -0.15
PCDH18-208ENST00000620262 POGZQ7Z3K3 1410 aa14.12□□□□□ -0.15
PCDH18-208ENST00000620262 FANCAO15360 1455 aa14.12□□□□□ -0.15
PCDH18-208ENST00000620262 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
PCDH18-208ENST00000620262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
PCDH18-208ENST00000620262 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
PCDH18-208ENST00000620262 APLP2Q06481 763 aa14.1□□□□□ -0.15
PCDH18-208ENST00000620262 YEATS2Q9ULM3 1422 aa14.09□□□□□ -0.15
PCDH18-208ENST00000620262 AKNAQ7Z591 1439 aa14.08□□□□□ -0.15
PCDH18-208ENST00000620262 PREX1Q8TCU6 1659 aa14.08□□□□□ -0.16
PCDH18-208ENST00000620262 DENND4BO75064 1496 aaPredicted RBP14.08□□□□□ -0.16
PCDH18-208ENST00000620262 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
PCDH18-208ENST00000620262 MAGI2Q86UL8 1455 aa14.07□□□□□ -0.16
PCDH18-208ENST00000620262 STRCQ7RTU9 1775 aa14.07□□□□□ -0.16
PCDH18-208ENST00000620262 FER1L4A9Z1Z3 1794 aa14.06□□□□□ -0.16
PCDH18-208ENST00000620262 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
PCDH18-208ENST00000620262 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
PCDH18-208ENST00000620262 EFCAB5A4FU69 1503 aa14.05□□□□□ -0.16
PCDH18-208ENST00000620262 SETD1BQ9UPS6 1966 aaKnown RBP14.05□□□□□ -0.16
PCDH18-208ENST00000620262 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
PCDH18-208ENST00000620262 ARHGEF12Q9NZN5 1544 aa14.04□□□□□ -0.16
PCDH18-208ENST00000620262 CFAP74Q9C0B2 1584 aa14.04□□□□□ -0.16
PCDH18-208ENST00000620262 ZFYVE16Q7Z3T8 1539 aa14.03□□□□□ -0.16
PCDH18-208ENST00000620262 PTPRTO14522 1441 aa14.02□□□□□ -0.16
PCDH18-208ENST00000620262 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
PCDH18-208ENST00000620262 PRXQ9BXM0 1461 aa14□□□□□ -0.17
PCDH18-208ENST00000620262 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
PCDH18-208ENST00000620262 LTBP4Q8N2S1 1624 aa14□□□□□ -0.17
PCDH18-208ENST00000620262 RAPGEF6Q8TEU7 1601 aa14□□□□□ -0.17
PCDH18-208ENST00000620262 SAMD9Q5K651 1589 aa13.98□□□□□ -0.17
PCDH18-208ENST00000620262 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
PCDH18-208ENST00000620262 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
PCDH18-208ENST00000620262 NUP153P49790 1475 aaKnown RBP13.96□□□□□ -0.17
PCDH18-208ENST00000620262 ABCB7O75027 752 aa13.96□□□□□ -0.17
PCDH18-208ENST00000620262 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
PCDH18-208ENST00000620262 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
PCDH18-208ENST00000620262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDH18-208ENST00000620262 ATP10AO60312 1499 aa13.93□□□□□ -0.18
PCDH18-208ENST00000620262 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
PCDH18-208ENST00000620262 MLECQ14165 292 aa13.9□□□□□ -0.18
PCDH18-208ENST00000620262 PLEKHD1A6NEE1 506 aa13.88□□□□□ -0.19
PCDH18-208ENST00000620262 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
PCDH18-208ENST00000620262 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
PCDH18-208ENST00000620262 NCOA1Q15788 1441 aa13.87□□□□□ -0.19
PCDH18-208ENST00000620262 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
PCDH18-208ENST00000620262 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
PCDH18-208ENST00000620262 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
PCDH18-208ENST00000620262 PLCH2O75038 1416 aa13.85□□□□□ -0.19
PCDH18-208ENST00000620262 C3P01024 1663 aa13.85□□□□□ -0.19
PCDH18-208ENST00000620262 KDM5CP41229 1560 aa13.83□□□□□ -0.19
PCDH18-208ENST00000620262 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
PCDH18-208ENST00000620262 AGLP35573 1532 aa13.81□□□□□ -0.2
PCDH18-208ENST00000620262 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
PCDH18-208ENST00000620262 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
PCDH18-208ENST00000620262 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
PCDH18-208ENST00000620262 MYO5CQ9NQX4 1742 aa13.76□□□□□ -0.21
PCDH18-208ENST00000620262 NPATQ14207 1427 aa13.76□□□□□ -0.21
PCDH18-208ENST00000620262 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
PCDH18-208ENST00000620262 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
PCDH18-208ENST00000620262 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
PCDH18-208ENST00000620262 MLH3Q9UHC1 1453 aa13.75□□□□□ -0.21
PCDH18-208ENST00000620262 EFCAB2Q5VUJ9 269 aa13.75□□□□□ -0.21
PCDH18-208ENST00000620262 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
PCDH18-208ENST00000620262 MROH2AA6NES4 1674 aa13.73□□□□□ -0.21
PCDH18-208ENST00000620262 ABCA6Q8N139 1617 aa13.73□□□□□ -0.21
PCDH18-208ENST00000620262 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
PCDH18-208ENST00000620262 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
PCDH18-208ENST00000620262 ZNF335Q9H4Z2 1342 aaPredicted RBP13.71□□□□□ -0.21
PCDH18-208ENST00000620262 CDK13Q14004 1512 aaKnown RBP13.71□□□□□ -0.21
PCDH18-208ENST00000620262 ZBTB22O15209 634 aa13.71□□□□□ -0.21
PCDH18-208ENST00000620262 POLA2Q14181 598 aa13.7□□□□□ -0.22
PCDH18-208ENST00000620262 PKD2Q13563 968 aa13.69□□□□□ -0.22
PCDH18-208ENST00000620262 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
PCDH18-208ENST00000620262 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
PCDH18-208ENST00000620262 HSPA1LP34931 641 aa13.66□□□□□ -0.22
PCDH18-208ENST00000620262 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
PCDH18-208ENST00000620262 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
PCDH18-208ENST00000620262 KIDINS220Q9ULH0 1771 aa13.65□□□□□ -0.22
PCDH18-208ENST00000620262 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
PCDH18-208ENST00000620262 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
PCDH18-208ENST00000620262 KIF14Q15058 1648 aa13.64□□□□□ -0.23
PCDH18-208ENST00000620262 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
PCDH18-208ENST00000620262 CPS1P31327 1500 aa13.64□□□□□ -0.23
PCDH18-208ENST00000620262 CEP170BQ9Y4F5 1589 aaPredicted RBP13.63□□□□□ -0.23
PCDH18-208ENST00000620262 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
PCDH18-208ENST00000620262 CDC42BPBQ9Y5S2 1711 aa13.63□□□□□ -0.23
PCDH18-208ENST00000620262 ABCC1P33527 1531 aa13.63□□□□□ -0.23
PCDH18-208ENST00000620262 TROQ12816 1431 aaPredicted RBP13.62□□□□□ -0.23
PCDH18-208ENST00000620262 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
PCDH18-208ENST00000620262 ITSN2Q9NZM3 1697 aa13.61□□□□□ -0.23
PCDH18-208ENST00000620262 TOM1O60784 492 aa13.61□□□□□ -0.23
PCDH18-208ENST00000620262 CDK11AQ9UQ88 783 aaPredicted RBP13.6□□□□□ -0.23
PCDH18-208ENST00000620262 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
PCDH18-208ENST00000620262 PREX2Q70Z35 1606 aa13.59□□□□□ -0.23
PCDH18-208ENST00000620262 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
PCDH18-208ENST00000620262 EEA1Q15075 1411 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms