RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 FOXD1Q16676 465 aa13.56□□□□□ -0.24
CDH23-213ENST00000619887 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
CDH23-213ENST00000619887 PKD2Q13563 968 aa13.55□□□□□ -0.24
CDH23-213ENST00000619887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDH23-213ENST00000619887 AKNAQ7Z591 1439 aa13.55□□□□□ -0.24
CDH23-213ENST00000619887 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
CDH23-213ENST00000619887 PTPRGP23470 1445 aa13.55□□□□□ -0.24
CDH23-213ENST00000619887 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
CDH23-213ENST00000619887 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
CDH23-213ENST00000619887 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
CDH23-213ENST00000619887 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
CDH23-213ENST00000619887 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
CDH23-213ENST00000619887 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
CDH23-213ENST00000619887 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
CDH23-213ENST00000619887 KCNH8Q96L42 1107 aa13.53□□□□□ -0.24
CDH23-213ENST00000619887 NUP155O75694 1391 aa13.52□□□□□ -0.24
CDH23-213ENST00000619887 DAPK1P53355 1430 aa13.52□□□□□ -0.25
CDH23-213ENST00000619887 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
CDH23-213ENST00000619887 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
CDH23-213ENST00000619887 WDR62O43379 1518 aa13.5□□□□□ -0.25
CDH23-213ENST00000619887 TCOF1Q13428 1488 aaKnown RBP13.49□□□□□ -0.25
CDH23-213ENST00000619887 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDH23-213ENST00000619887 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
CDH23-213ENST00000619887 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
CDH23-213ENST00000619887 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
CDH23-213ENST00000619887 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CDH23-213ENST00000619887 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.25
CDH23-213ENST00000619887 KIAA0556O60303 1618 aa13.46□□□□□ -0.25
CDH23-213ENST00000619887 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
CDH23-213ENST00000619887 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH23-213ENST00000619887 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
CDH23-213ENST00000619887 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
CDH23-213ENST00000619887 ABCC5O15440 1437 aa13.43□□□□□ -0.26
CDH23-213ENST00000619887 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
CDH23-213ENST00000619887 RGL3Q3MIN7 710 aa13.42□□□□□ -0.26
CDH23-213ENST00000619887 EIF4G3O43432 1585 aaKnown RBP13.42□□□□□ -0.26
CDH23-213ENST00000619887 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
CDH23-213ENST00000619887 PLB1Q6P1J6 1458 aa13.42□□□□□ -0.26
CDH23-213ENST00000619887 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
CDH23-213ENST00000619887 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
CDH23-213ENST00000619887 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
CDH23-213ENST00000619887 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
CDH23-213ENST00000619887 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.27
CDH23-213ENST00000619887 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
CDH23-213ENST00000619887 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
CDH23-213ENST00000619887 ITSN2Q9NZM3 1697 aa13.39□□□□□ -0.27
CDH23-213ENST00000619887 CCDC7Q96M83 1385 aa13.38□□□□□ -0.27
CDH23-213ENST00000619887 KIF14Q15058 1648 aa13.38□□□□□ -0.27
CDH23-213ENST00000619887 DISP1Q96F81 1524 aa13.38□□□□□ -0.27
CDH23-213ENST00000619887 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
CDH23-213ENST00000619887 USP47Q96K76 1375 aa13.36□□□□□ -0.27
CDH23-213ENST00000619887 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
CDH23-213ENST00000619887 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
CDH23-213ENST00000619887 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
CDH23-213ENST00000619887 KANK1Q14678 1352 aa13.36□□□□□ -0.27
CDH23-213ENST00000619887 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
CDH23-213ENST00000619887 CCDC144AA2RUR9 1427 aa13.35□□□□□ -0.27
CDH23-213ENST00000619887 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
CDH23-213ENST00000619887 NCOA1Q15788 1441 aa13.35□□□□□ -0.27
CDH23-213ENST00000619887 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
CDH23-213ENST00000619887 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
CDH23-213ENST00000619887 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
CDH23-213ENST00000619887 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
CDH23-213ENST00000619887 RPRD2Q5VT52 1461 aaKnown RBP13.34□□□□□ -0.27
CDH23-213ENST00000619887 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
CDH23-213ENST00000619887 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
CDH23-213ENST00000619887 NUP160Q12769 1436 aa13.33□□□□□ -0.28
CDH23-213ENST00000619887 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
CDH23-213ENST00000619887 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
CDH23-213ENST00000619887 DNMT1P26358 1616 aaKnown RBP13.32□□□□□ -0.28
CDH23-213ENST00000619887 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CDH23-213ENST00000619887 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
CDH23-213ENST00000619887 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
CDH23-213ENST00000619887 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
CDH23-213ENST00000619887 TMF1P82094 1093 aa13.31□□□□□ -0.28
CDH23-213ENST00000619887 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
CDH23-213ENST00000619887 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
CDH23-213ENST00000619887 RALBP1Q15311 655 aa13.31□□□□□ -0.28
CDH23-213ENST00000619887 IRX6P78412 446 aaPredicted RBP13.3□□□□□ -0.28
CDH23-213ENST00000619887 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
CDH23-213ENST00000619887 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
CDH23-213ENST00000619887 CCDC141Q6ZP82 1450 aa13.29□□□□□ -0.28
CDH23-213ENST00000619887 ATP10BO94823 1461 aa13.27□□□□□ -0.28
CDH23-213ENST00000619887 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.28
CDH23-213ENST00000619887 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDH23-213ENST00000619887 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
CDH23-213ENST00000619887 CEP170Q5SW79 1584 aa13.26□□□□□ -0.29
CDH23-213ENST00000619887 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
CDH23-213ENST00000619887 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
CDH23-213ENST00000619887 ZBED9Q6R2W3 1325 aa13.25□□□□□ -0.29
CDH23-213ENST00000619887 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
CDH23-213ENST00000619887 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
CDH23-213ENST00000619887 STAC3Q96MF2 364 aa13.22□□□□□ -0.29
CDH23-213ENST00000619887 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
CDH23-213ENST00000619887 CANXP27824 592 aaKnown RBP13.21□□□□□ -0.29
CDH23-213ENST00000619887 NLRP13Q86W25 1043 aa13.21□□□□□ -0.3
CDH23-213ENST00000619887 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
CDH23-213ENST00000619887 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
CDH23-213ENST00000619887 KIF3BO15066 747 aa13.19□□□□□ -0.3
CDH23-213ENST00000619887 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms