RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 PRG4Q92954 1404 aaPredicted RBP27.05■■□□□ 1.92
PCDHGB3-202ENST00000618934 DNMT1P26358 1616 aaKnown RBP27.05■■□□□ 1.92
PCDHGB3-202ENST00000618934 FKBP8Q14318 412 aa27.04■■□□□ 1.92
PCDHGB3-202ENST00000618934 ROCK1Q13464 1354 aa27.03■■□□□ 1.92
PCDHGB3-202ENST00000618934 MYT1Q01538 1121 aa27.02■■□□□ 1.92
PCDHGB3-202ENST00000618934 PLB1Q6P1J6 1458 aa27.02■■□□□ 1.92
PCDHGB3-202ENST00000618934 CEP170Q5SW79 1584 aa27.01■■□□□ 1.92
PCDHGB3-202ENST00000618934 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.92
PCDHGB3-202ENST00000618934 CHMP7Q8WUX9 453 aaPredicted RBP27.01■■□□□ 1.92
PCDHGB3-202ENST00000618934 FBLN2P98095 1184 aa27.01■■□□□ 1.91
PCDHGB3-202ENST00000618934 CDK11AQ9UQ88 783 aaPredicted RBP26.99■■□□□ 1.91
PCDHGB3-202ENST00000618934 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
PCDHGB3-202ENST00000618934 C11orf95C9JLR9 678 aaPredicted RBP26.98■■□□□ 1.91
PCDHGB3-202ENST00000618934 EIF4G2P78344 907 aaKnown RBP eCLIP26.98■■□□□ 1.91
PCDHGB3-202ENST00000618934 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
PCDHGB3-202ENST00000618934 TSHZ2Q9NRE2 1034 aa26.96■■□□□ 1.91
PCDHGB3-202ENST00000618934 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.9
PCDHGB3-202ENST00000618934 TROQ12816 1431 aaPredicted RBP26.95■■□□□ 1.9
PCDHGB3-202ENST00000618934 MAGI1Q96QZ7 1491 aaPredicted RBP26.94■■□□□ 1.9
PCDHGB3-202ENST00000618934 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
PCDHGB3-202ENST00000618934 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
PCDHGB3-202ENST00000618934 KIF14Q15058 1648 aa26.93■■□□□ 1.9
PCDHGB3-202ENST00000618934 SYNJ2O15056 1496 aa26.92■■□□□ 1.9
PCDHGB3-202ENST00000618934 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
PCDHGB3-202ENST00000618934 CAMSAP2Q08AD1 1489 aa26.92■■□□□ 1.9
PCDHGB3-202ENST00000618934 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
PCDHGB3-202ENST00000618934 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
PCDHGB3-202ENST00000618934 TEX14Q8IWB6 1497 aa26.9■■□□□ 1.9
PCDHGB3-202ENST00000618934 PZPP20742 1482 aa26.87■■□□□ 1.89
PCDHGB3-202ENST00000618934 CCDC184Q52MB2 194 aa26.86■■□□□ 1.89
PCDHGB3-202ENST00000618934 NCOA1Q15788 1441 aa26.86■■□□□ 1.89
PCDHGB3-202ENST00000618934 CCDC7Q96M83 1385 aa26.83■■□□□ 1.89
PCDHGB3-202ENST00000618934 HNRNPUQ00839 825 aaKnown RBP eCLIP26.82■■□□□ 1.88
PCDHGB3-202ENST00000618934 NUP160Q12769 1436 aa26.82■■□□□ 1.88
PCDHGB3-202ENST00000618934 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
PCDHGB3-202ENST00000618934 ITSN2Q9NZM3 1697 aa26.81■■□□□ 1.88
PCDHGB3-202ENST00000618934 ADCY10Q96PN6 1610 aa26.79■■□□□ 1.88
PCDHGB3-202ENST00000618934 CARMIL2Q6F5E8 1435 aa26.79■■□□□ 1.88
PCDHGB3-202ENST00000618934 NEFLP07196 543 aa26.78■■□□□ 1.88
PCDHGB3-202ENST00000618934 SPATA31E1Q6ZUB1 1445 aa26.78■■□□□ 1.88
PCDHGB3-202ENST00000618934 ADGBQ8N7X0 1667 aa26.77■■□□□ 1.88
PCDHGB3-202ENST00000618934 CROCC2H7BZ55 1655 aa26.75■■□□□ 1.87
PCDHGB3-202ENST00000618934 ADGRL2O95490 1459 aa26.74■■□□□ 1.87
PCDHGB3-202ENST00000618934 KIF7Q2M1P5 1343 aa26.73■■□□□ 1.87
PCDHGB3-202ENST00000618934 PKD2Q13563 968 aa26.73■■□□□ 1.87
PCDHGB3-202ENST00000618934 PRKRIP1Q9H875 184 aaPredicted RBP26.73■■□□□ 1.87
PCDHGB3-202ENST00000618934 ATP10BO94823 1461 aa26.72■■□□□ 1.87
PCDHGB3-202ENST00000618934 CDC42BPAQ5VT25 1732 aa26.71■■□□□ 1.87
PCDHGB3-202ENST00000618934 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
PCDHGB3-202ENST00000618934 ABCA8O94911 1581 aa26.71■■□□□ 1.87
PCDHGB3-202ENST00000618934 KIAA1107Q9UPP5 1409 aa26.7■■□□□ 1.87
PCDHGB3-202ENST00000618934 ANKRD30AQ9BXX3 1397 aa26.69■■□□□ 1.86
PCDHGB3-202ENST00000618934 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
PCDHGB3-202ENST00000618934 ANKRD50Q9ULJ7 1429 aa26.67■■□□□ 1.86
PCDHGB3-202ENST00000618934 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
PCDHGB3-202ENST00000618934 MBD5Q9P267 1494 aa26.66■■□□□ 1.86
PCDHGB3-202ENST00000618934 IRX6P78412 446 aaPredicted RBP26.64■■□□□ 1.85
PCDHGB3-202ENST00000618934 FAM9BQ8IZU0 186 aa26.64■■□□□ 1.85
PCDHGB3-202ENST00000618934 POLR1AO95602 1720 aaPredicted RBP26.61■■□□□ 1.85
PCDHGB3-202ENST00000618934 HNRNPMP52272 730 aaKnown RBP eCLIP26.61■■□□□ 1.85
PCDHGB3-202ENST00000618934 C9orf84Q5VXU9 1444 aa26.61■■□□□ 1.85
PCDHGB3-202ENST00000618934 MRS2Q9HD23 443 aa26.6■■□□□ 1.85
PCDHGB3-202ENST00000618934 NUP155O75694 1391 aa26.6■■□□□ 1.85
PCDHGB3-202ENST00000618934 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
PCDHGB3-202ENST00000618934 USP47Q96K76 1375 aa26.56■■□□□ 1.84
PCDHGB3-202ENST00000618934 CNGB1Q14028 1251 aaPredicted RBP26.56■■□□□ 1.84
PCDHGB3-202ENST00000618934 POLR3GLQ9BT43 218 aa26.54■■□□□ 1.84
PCDHGB3-202ENST00000618934 TSPY4P0CV99 314 aa26.53■■□□□ 1.84
PCDHGB3-202ENST00000618934 TSPY10P0CW01 314 aa26.53■■□□□ 1.84
PCDHGB3-202ENST00000618934 SHANK2Q9UPX8 1470 aa26.53■■□□□ 1.84
PCDHGB3-202ENST00000618934 PTPRGP23470 1445 aa26.51■■□□□ 1.83
PCDHGB3-202ENST00000618934 DHX29Q7Z478 1369 aaKnown RBP26.51■■□□□ 1.83
PCDHGB3-202ENST00000618934 KIF15Q9NS87 1388 aa26.49■■□□□ 1.83
PCDHGB3-202ENST00000618934 KDM5CP41229 1560 aa26.49■■□□□ 1.83
PCDHGB3-202ENST00000618934 KDM2AQ9Y2K7 1162 aa26.47■■□□□ 1.83
PCDHGB3-202ENST00000618934 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.82
PCDHGB3-202ENST00000618934 RBM19Q9Y4C8 960 aaKnown RBP26.45■■□□□ 1.82
PCDHGB3-202ENST00000618934 UHRF1BP1Q6BDS2 1440 aa26.44■■□□□ 1.82
PCDHGB3-202ENST00000618934 SAMD9LQ8IVG5 1584 aa26.44■■□□□ 1.82
PCDHGB3-202ENST00000618934 KDM5DQ9BY66 1539 aa26.43■■□□□ 1.82
PCDHGB3-202ENST00000618934 ZBED9Q6R2W3 1325 aa26.42■■□□□ 1.82
PCDHGB3-202ENST00000618934 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
PCDHGB3-202ENST00000618934 CARD11Q9BXL7 1154 aa26.41■■□□□ 1.82
PCDHGB3-202ENST00000618934 RALGAPBQ86X10 1494 aa26.41■■□□□ 1.82
PCDHGB3-202ENST00000618934 DCAF11Q8TEB1 546 aa26.39■■□□□ 1.82
PCDHGB3-202ENST00000618934 PREX2Q70Z35 1606 aa26.36■■□□□ 1.81
PCDHGB3-202ENST00000618934 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
PCDHGB3-202ENST00000618934 CHD1O14646 1710 aa26.36■■□□□ 1.81
PCDHGB3-202ENST00000618934 ST20-MTHFSA0A0A6YYL1 179 aa26.36■■□□□ 1.81
PCDHGB3-202ENST00000618934 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
PCDHGB3-202ENST00000618934 SENP3-EIF4A1A0A087X0R7 540 aa26.35■■□□□ 1.81
PCDHGB3-202ENST00000618934 FAM135AQ9P2D6 1515 aa26.33■■□□□ 1.8
PCDHGB3-202ENST00000618934 TTC37Q6PGP7 1564 aa26.32■■□□□ 1.8
PCDHGB3-202ENST00000618934 SYCP2Q9BX26 1530 aa26.31■■□□□ 1.8
PCDHGB3-202ENST00000618934 ARID4BQ4LE39 1312 aaPredicted RBP26.31■■□□□ 1.8
PCDHGB3-202ENST00000618934 ERCC6L2Q5T890 1561 aa26.31■■□□□ 1.8
PCDHGB3-202ENST00000618934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.28■■□□□ 1.8
PCDHGB3-202ENST00000618934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.27■■□□□ 1.8
PCDHGB3-202ENST00000618934 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
PCDHGB3-202ENST00000618934 RGL3Q3MIN7 710 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms