RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
CPEB1-216ENST00000618449 DNMT1P26358 1616 aaKnown RBP16.58■□□□□ 0.24
CPEB1-216ENST00000618449 ABCC5O15440 1437 aa16.57■□□□□ 0.24
CPEB1-216ENST00000618449 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
CPEB1-216ENST00000618449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.54■□□□□ 0.24
CPEB1-216ENST00000618449 AKNAQ7Z591 1439 aa16.54■□□□□ 0.24
CPEB1-216ENST00000618449 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
CPEB1-216ENST00000618449 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
CPEB1-216ENST00000618449 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
CPEB1-216ENST00000618449 GCC2Q8IWJ2 1684 aa16.52■□□□□ 0.23
CPEB1-216ENST00000618449 PREX2Q70Z35 1606 aa16.52■□□□□ 0.23
CPEB1-216ENST00000618449 CDC42BPBQ9Y5S2 1711 aa16.51■□□□□ 0.23
CPEB1-216ENST00000618449 ROCK1Q13464 1354 aa16.51■□□□□ 0.23
CPEB1-216ENST00000618449 MYT1Q01538 1121 aa16.51■□□□□ 0.23
CPEB1-216ENST00000618449 KDM6BO15054 1643 aa16.48■□□□□ 0.23
CPEB1-216ENST00000618449 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
CPEB1-216ENST00000618449 SAMD9LQ8IVG5 1584 aa16.47■□□□□ 0.23
CPEB1-216ENST00000618449 CROCC2H7BZ55 1655 aa16.47■□□□□ 0.23
CPEB1-216ENST00000618449 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
CPEB1-216ENST00000618449 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
CPEB1-216ENST00000618449 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.23
CPEB1-216ENST00000618449 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.23
CPEB1-216ENST00000618449 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
CPEB1-216ENST00000618449 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
CPEB1-216ENST00000618449 MBD5Q9P267 1494 aa16.44■□□□□ 0.22
CPEB1-216ENST00000618449 ADGRL2O95490 1459 aa16.44■□□□□ 0.22
CPEB1-216ENST00000618449 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
CPEB1-216ENST00000618449 PLCH2O75038 1416 aa16.43■□□□□ 0.22
CPEB1-216ENST00000618449 ARHGEF5Q12774 1597 aa16.43■□□□□ 0.22
CPEB1-216ENST00000618449 ASXL2Q76L83 1435 aa16.42■□□□□ 0.22
CPEB1-216ENST00000618449 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
CPEB1-216ENST00000618449 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
CPEB1-216ENST00000618449 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
CPEB1-216ENST00000618449 TSPY4P0CV99 314 aa16.41■□□□□ 0.22
CPEB1-216ENST00000618449 TSPY10P0CW01 314 aa16.41■□□□□ 0.22
CPEB1-216ENST00000618449 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
CPEB1-216ENST00000618449 SYCP2Q9BX26 1530 aa16.4■□□□□ 0.22
CPEB1-216ENST00000618449 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
CPEB1-216ENST00000618449 CCDC141Q6ZP82 1450 aa16.4■□□□□ 0.22
CPEB1-216ENST00000618449 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
CPEB1-216ENST00000618449 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
CPEB1-216ENST00000618449 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
CPEB1-216ENST00000618449 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
CPEB1-216ENST00000618449 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
CPEB1-216ENST00000618449 ABCA9Q8IUA7 1624 aa16.36■□□□□ 0.21
CPEB1-216ENST00000618449 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
CPEB1-216ENST00000618449 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
CPEB1-216ENST00000618449 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
CPEB1-216ENST00000618449 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
CPEB1-216ENST00000618449 RIMBP3CA6NJZ7 1639 aa16.35■□□□□ 0.21
CPEB1-216ENST00000618449 RIMBP3BA6NNM3 1639 aa16.35■□□□□ 0.21
CPEB1-216ENST00000618449 RIMBP3Q9UFD9 1639 aa16.35■□□□□ 0.21
CPEB1-216ENST00000618449 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
CPEB1-216ENST00000618449 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
CPEB1-216ENST00000618449 MPHOSPH9Q99550 1183 aa16.34■□□□□ 0.21
CPEB1-216ENST00000618449 ANKRD50Q9ULJ7 1429 aa16.34■□□□□ 0.21
CPEB1-216ENST00000618449 ABCC1P33527 1531 aa16.33■□□□□ 0.2
CPEB1-216ENST00000618449 KIF15Q9NS87 1388 aa16.32■□□□□ 0.2
CPEB1-216ENST00000618449 MAST1Q9Y2H9 1570 aa16.31■□□□□ 0.2
CPEB1-216ENST00000618449 FANCAO15360 1455 aa16.29■□□□□ 0.2
CPEB1-216ENST00000618449 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
CPEB1-216ENST00000618449 TIMELESSQ9UNS1 1208 aa16.28■□□□□ 0.2
CPEB1-216ENST00000618449 FOXD1Q16676 465 aa16.27■□□□□ 0.19
CPEB1-216ENST00000618449 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.19
CPEB1-216ENST00000618449 PZPP20742 1482 aa16.27■□□□□ 0.19
CPEB1-216ENST00000618449 PLXNC1O60486 1568 aa16.25■□□□□ 0.19
CPEB1-216ENST00000618449 AFAP1Q8N556 730 aa16.24■□□□□ 0.19
CPEB1-216ENST00000618449 CD109Q6YHK3 1445 aa16.23■□□□□ 0.19
CPEB1-216ENST00000618449 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
CPEB1-216ENST00000618449 NUP155O75694 1391 aa16.22■□□□□ 0.19
CPEB1-216ENST00000618449 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
CPEB1-216ENST00000618449 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
CPEB1-216ENST00000618449 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
CPEB1-216ENST00000618449 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
CPEB1-216ENST00000618449 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
CPEB1-216ENST00000618449 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
CPEB1-216ENST00000618449 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
CPEB1-216ENST00000618449 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
CPEB1-216ENST00000618449 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
CPEB1-216ENST00000618449 PKD2Q13563 968 aa16.18■□□□□ 0.18
CPEB1-216ENST00000618449 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
CPEB1-216ENST00000618449 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
CPEB1-216ENST00000618449 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
CPEB1-216ENST00000618449 INO80Q9ULG1 1556 aaPredicted RBP16.15■□□□□ 0.18
CPEB1-216ENST00000618449 UNC13BO14795 1591 aa16.14■□□□□ 0.17
CPEB1-216ENST00000618449 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
CPEB1-216ENST00000618449 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
CPEB1-216ENST00000618449 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
CPEB1-216ENST00000618449 MIER1Q8N108 512 aa16.13■□□□□ 0.17
CPEB1-216ENST00000618449 FAM135AQ9P2D6 1515 aa16.13■□□□□ 0.17
CPEB1-216ENST00000618449 ZNF518AQ6AHZ1 1483 aa16.12■□□□□ 0.17
CPEB1-216ENST00000618449 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
CPEB1-216ENST00000618449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPEB1-216ENST00000618449 GLI2P10070 1586 aa16.12■□□□□ 0.17
CPEB1-216ENST00000618449 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
CPEB1-216ENST00000618449 NEO1Q92859 1461 aa16.11■□□□□ 0.17
CPEB1-216ENST00000618449 POGZQ7Z3K3 1410 aa16.1■□□□□ 0.17
CPEB1-216ENST00000618449 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
CPEB1-216ENST00000618449 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
CPEB1-216ENST00000618449 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms