RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
PSMB3-210ENST00000618159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
PSMB3-210ENST00000618159 MLECQ14165 292 aa15.77■□□□□ 0.12
PSMB3-210ENST00000618159 ARHGEF12Q9NZN5 1544 aa15.77■□□□□ 0.11
PSMB3-210ENST00000618159 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.11
PSMB3-210ENST00000618159 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
PSMB3-210ENST00000618159 CEBPAP49715 358 aaPredicted RBP15.7■□□□□ 0.1
PSMB3-210ENST00000618159 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
PSMB3-210ENST00000618159 ATP10AO60312 1499 aa15.69■□□□□ 0.1
PSMB3-210ENST00000618159 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
PSMB3-210ENST00000618159 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
PSMB3-210ENST00000618159 SCAPERQ9BY12 1400 aa15.68■□□□□ 0.1
PSMB3-210ENST00000618159 UHRF1BP1Q6BDS2 1440 aa15.67■□□□□ 0.1
PSMB3-210ENST00000618159 PTPRTO14522 1441 aa15.66■□□□□ 0.1
PSMB3-210ENST00000618159 C3P01024 1663 aa15.66■□□□□ 0.1
PSMB3-210ENST00000618159 MYO5CQ9NQX4 1742 aa15.63■□□□□ 0.09
PSMB3-210ENST00000618159 PLCH2O75038 1416 aa15.63■□□□□ 0.09
PSMB3-210ENST00000618159 IQSEC2Q5JU85 1478 aa15.63■□□□□ 0.09
PSMB3-210ENST00000618159 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
PSMB3-210ENST00000618159 RANGAP1P46060 587 aaPredicted RBP15.59■□□□□ 0.09
PSMB3-210ENST00000618159 KDM5CP41229 1560 aa15.58■□□□□ 0.09
PSMB3-210ENST00000618159 DIP2CQ9Y2E4 1556 aa15.58■□□□□ 0.08
PSMB3-210ENST00000618159 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
PSMB3-210ENST00000618159 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
PSMB3-210ENST00000618159 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
PSMB3-210ENST00000618159 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
PSMB3-210ENST00000618159 ABCA6Q8N139 1617 aa15.55■□□□□ 0.08
PSMB3-210ENST00000618159 KIF14Q15058 1648 aa15.54■□□□□ 0.08
PSMB3-210ENST00000618159 EFCAB2Q5VUJ9 269 aa15.53■□□□□ 0.08
PSMB3-210ENST00000618159 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.08
PSMB3-210ENST00000618159 CAMSAP1Q5T5Y3 1602 aa15.51■□□□□ 0.07
PSMB3-210ENST00000618159 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
PSMB3-210ENST00000618159 AGLP35573 1532 aa15.5■□□□□ 0.07
PSMB3-210ENST00000618159 CDC42BPBQ9Y5S2 1711 aa15.5■□□□□ 0.07
PSMB3-210ENST00000618159 ARHGAP5Q13017 1502 aa15.48■□□□□ 0.07
PSMB3-210ENST00000618159 MLH3Q9UHC1 1453 aa15.47■□□□□ 0.07
PSMB3-210ENST00000618159 SUPT6HQ7KZ85 1726 aaKnown RBP15.47■□□□□ 0.07
PSMB3-210ENST00000618159 MROH2AA6NES4 1674 aa15.47■□□□□ 0.07
PSMB3-210ENST00000618159 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
PSMB3-210ENST00000618159 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.07
PSMB3-210ENST00000618159 UBAP1LF5GYI3 381 aa15.46■□□□□ 0.07
PSMB3-210ENST00000618159 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
PSMB3-210ENST00000618159 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.06
PSMB3-210ENST00000618159 ITSN2Q9NZM3 1697 aa15.45■□□□□ 0.06
PSMB3-210ENST00000618159 MED1Q15648 1581 aaPredicted RBP15.44■□□□□ 0.06
PSMB3-210ENST00000618159 ZNF142P52746 1687 aaPredicted RBP15.44■□□□□ 0.06
PSMB3-210ENST00000618159 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
PSMB3-210ENST00000618159 ESF1Q9H501 851 aaKnown RBP15.43■□□□□ 0.06
PSMB3-210ENST00000618159 ABCC1P33527 1531 aa15.43■□□□□ 0.06
PSMB3-210ENST00000618159 NPATQ14207 1427 aa15.43■□□□□ 0.06
PSMB3-210ENST00000618159 NCKAP5LQ9HCH0 1330 aa15.43■□□□□ 0.06
PSMB3-210ENST00000618159 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
PSMB3-210ENST00000618159 PREX2Q70Z35 1606 aa15.41■□□□□ 0.06
PSMB3-210ENST00000618159 MYO3AQ8NEV4 1616 aa15.4■□□□□ 0.06
PSMB3-210ENST00000618159 EEA1Q15075 1411 aa15.4■□□□□ 0.06
PSMB3-210ENST00000618159 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
PSMB3-210ENST00000618159 PLA2R1Q13018 1463 aa15.39■□□□□ 0.05
PSMB3-210ENST00000618159 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
PSMB3-210ENST00000618159 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
PSMB3-210ENST00000618159 TCOF1Q13428 1488 aaKnown RBP15.38■□□□□ 0.05
PSMB3-210ENST00000618159 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
PSMB3-210ENST00000618159 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
PSMB3-210ENST00000618159 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
PSMB3-210ENST00000618159 CEP170BQ9Y4F5 1589 aaPredicted RBP15.36■□□□□ 0.05
PSMB3-210ENST00000618159 CLIP1P30622 1438 aa15.36■□□□□ 0.05
PSMB3-210ENST00000618159 HSPA1LP34931 641 aa15.35■□□□□ 0.05
PSMB3-210ENST00000618159 PKD2Q13563 968 aa15.35■□□□□ 0.05
PSMB3-210ENST00000618159 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.05
PSMB3-210ENST00000618159 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.05
PSMB3-210ENST00000618159 POLR1AO95602 1720 aaPredicted RBP15.31■□□□□ 0.04
PSMB3-210ENST00000618159 PTPRKQ15262 1439 aa15.31■□□□□ 0.04
PSMB3-210ENST00000618159 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
PSMB3-210ENST00000618159 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
PSMB3-210ENST00000618159 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
PSMB3-210ENST00000618159 PIP4K2BP78356 416 aa15.29■□□□□ 0.04
PSMB3-210ENST00000618159 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
PSMB3-210ENST00000618159 ALKQ9UM73 1620 aa15.27■□□□□ 0.03
PSMB3-210ENST00000618159 NEURL4Q96JN8 1562 aa15.27■□□□□ 0.03
PSMB3-210ENST00000618159 CPS1P31327 1500 aa15.27■□□□□ 0.03
PSMB3-210ENST00000618159 SYCP2Q9BX26 1530 aa15.27■□□□□ 0.03
PSMB3-210ENST00000618159 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
PSMB3-210ENST00000618159 TOM1O60784 492 aa15.25■□□□□ 0.03
PSMB3-210ENST00000618159 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
PSMB3-210ENST00000618159 A2ML1A8K2U0 1454 aa15.24■□□□□ 0.03
PSMB3-210ENST00000618159 SHANK2Q9UPX8 1470 aa15.24■□□□□ 0.03
PSMB3-210ENST00000618159 SPAG9O60271 1321 aaKnown RBP15.23■□□□□ 0.03
PSMB3-210ENST00000618159 A2MP01023 1474 aa15.23■□□□□ 0.03
PSMB3-210ENST00000618159 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
PSMB3-210ENST00000618159 VWDEQ8N2E2 1590 aa15.21■□□□□ 0.03
PSMB3-210ENST00000618159 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
PSMB3-210ENST00000618159 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
PSMB3-210ENST00000618159 ADGBQ8N7X0 1667 aa15.21■□□□□ 0.03
PSMB3-210ENST00000618159 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
PSMB3-210ENST00000618159 HNRNPMP52272 730 aaKnown RBP eCLIP15.2■□□□□ 0.02
PSMB3-210ENST00000618159 GGT6Q6P531 493 aa15.19■□□□□ 0.02
PSMB3-210ENST00000618159 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
PSMB3-210ENST00000618159 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
PSMB3-210ENST00000618159 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
PSMB3-210ENST00000618159 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
PSMB3-210ENST00000618159 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms