RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 PPRC1Q5VV67 1664 aaKnown RBP18.49■□□□□ 0.55
CLTCL1-210ENST00000617926 CDK13Q14004 1512 aaKnown RBP18.49■□□□□ 0.55
CLTCL1-210ENST00000617926 MAP3K4Q9Y6R4 1608 aa18.48■□□□□ 0.55
CLTCL1-210ENST00000617926 PTPN23Q9H3S7 1636 aa18.47■□□□□ 0.55
CLTCL1-210ENST00000617926 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
CLTCL1-210ENST00000617926 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
CLTCL1-210ENST00000617926 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
CLTCL1-210ENST00000617926 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
CLTCL1-210ENST00000617926 SIN3AQ96ST3 1273 aa18.44■□□□□ 0.54
CLTCL1-210ENST00000617926 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
CLTCL1-210ENST00000617926 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
CLTCL1-210ENST00000617926 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
CLTCL1-210ENST00000617926 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
CLTCL1-210ENST00000617926 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
CLTCL1-210ENST00000617926 ABCA9Q8IUA7 1624 aa18.39■□□□□ 0.53
CLTCL1-210ENST00000617926 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
CLTCL1-210ENST00000617926 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
CLTCL1-210ENST00000617926 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
CLTCL1-210ENST00000617926 NAIPQ13075 1403 aa18.35■□□□□ 0.53
CLTCL1-210ENST00000617926 TCOF1Q13428 1488 aaKnown RBP18.34■□□□□ 0.53
CLTCL1-210ENST00000617926 CCER2I3L3R5 266 aa18.34■□□□□ 0.53
CLTCL1-210ENST00000617926 CD109Q6YHK3 1445 aa18.33■□□□□ 0.53
CLTCL1-210ENST00000617926 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
CLTCL1-210ENST00000617926 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
CLTCL1-210ENST00000617926 KDM6BO15054 1643 aa18.32■□□□□ 0.52
CLTCL1-210ENST00000617926 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
CLTCL1-210ENST00000617926 KIF14Q15058 1648 aa18.32■□□□□ 0.52
CLTCL1-210ENST00000617926 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
CLTCL1-210ENST00000617926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLTCL1-210ENST00000617926 AKNAQ7Z591 1439 aa18.31■□□□□ 0.52
CLTCL1-210ENST00000617926 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
CLTCL1-210ENST00000617926 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
CLTCL1-210ENST00000617926 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
CLTCL1-210ENST00000617926 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.51
CLTCL1-210ENST00000617926 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
CLTCL1-210ENST00000617926 MYO5CQ9NQX4 1742 aa18.22■□□□□ 0.51
CLTCL1-210ENST00000617926 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
CLTCL1-210ENST00000617926 ANP32CO43423 234 aa18.22■□□□□ 0.51
CLTCL1-210ENST00000617926 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
CLTCL1-210ENST00000617926 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
CLTCL1-210ENST00000617926 CDC42BPAQ5VT25 1732 aa18.17■□□□□ 0.5
CLTCL1-210ENST00000617926 CDC42BPBQ9Y5S2 1711 aa18.17■□□□□ 0.5
CLTCL1-210ENST00000617926 NEO1Q92859 1461 aa18.17■□□□□ 0.5
CLTCL1-210ENST00000617926 FANCAO15360 1455 aa18.16■□□□□ 0.5
CLTCL1-210ENST00000617926 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
CLTCL1-210ENST00000617926 ARAP3Q8WWN8 1544 aa18.16■□□□□ 0.5
CLTCL1-210ENST00000617926 PLCH2O75038 1416 aa18.15■□□□□ 0.5
CLTCL1-210ENST00000617926 PREX2Q70Z35 1606 aa18.15■□□□□ 0.5
CLTCL1-210ENST00000617926 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-210ENST00000617926 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
CLTCL1-210ENST00000617926 FKBP8Q14318 412 aa18.12■□□□□ 0.49
CLTCL1-210ENST00000617926 RICTORQ6R327 1708 aa18.11■□□□□ 0.49
CLTCL1-210ENST00000617926 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
CLTCL1-210ENST00000617926 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
CLTCL1-210ENST00000617926 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
CLTCL1-210ENST00000617926 NEFLP07196 543 aa18.08■□□□□ 0.48
CLTCL1-210ENST00000617926 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
CLTCL1-210ENST00000617926 RAPGEF3O95398 923 aa18.06■□□□□ 0.48
CLTCL1-210ENST00000617926 ADGRL1O94910 1474 aa18.06■□□□□ 0.48
CLTCL1-210ENST00000617926 GPATCH8Q9UKJ3 1502 aaKnown RBP18.06■□□□□ 0.48
CLTCL1-210ENST00000617926 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 DAPK1P53355 1430 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 EFCAB2Q5VUJ9 269 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 BCANQ96GW7 911 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
CLTCL1-210ENST00000617926 ABCC1P33527 1531 aa18.02■□□□□ 0.48
CLTCL1-210ENST00000617926 SCAPERQ9BY12 1400 aa18.02■□□□□ 0.48
CLTCL1-210ENST00000617926 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.48
CLTCL1-210ENST00000617926 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
CLTCL1-210ENST00000617926 NCOA1Q15788 1441 aa18.01■□□□□ 0.47
CLTCL1-210ENST00000617926 POGZQ7Z3K3 1410 aa18.01■□□□□ 0.47
CLTCL1-210ENST00000617926 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
CLTCL1-210ENST00000617926 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
CLTCL1-210ENST00000617926 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
CLTCL1-210ENST00000617926 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
CLTCL1-210ENST00000617926 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
CLTCL1-210ENST00000617926 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
CLTCL1-210ENST00000617926 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
CLTCL1-210ENST00000617926 ABCC5O15440 1437 aa17.97■□□□□ 0.47
CLTCL1-210ENST00000617926 SYCP2Q9BX26 1530 aa17.97■□□□□ 0.47
CLTCL1-210ENST00000617926 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLTCL1-210ENST00000617926 KDM5CP41229 1560 aa17.96■□□□□ 0.47
CLTCL1-210ENST00000617926 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
CLTCL1-210ENST00000617926 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
CLTCL1-210ENST00000617926 CROCC2H7BZ55 1655 aa17.96■□□□□ 0.47
CLTCL1-210ENST00000617926 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
CLTCL1-210ENST00000617926 ZNF518AQ6AHZ1 1483 aa17.94■□□□□ 0.46
CLTCL1-210ENST00000617926 CCDC7Q96M83 1385 aa17.94■□□□□ 0.46
CLTCL1-210ENST00000617926 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
CLTCL1-210ENST00000617926 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
CLTCL1-210ENST00000617926 YEATS2Q9ULM3 1422 aa17.93■□□□□ 0.46
CLTCL1-210ENST00000617926 SIGLEC1Q9BZZ2 1709 aa17.93■□□□□ 0.46
CLTCL1-210ENST00000617926 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
CLTCL1-210ENST00000617926 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
CLTCL1-210ENST00000617926 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
CLTCL1-210ENST00000617926 AFAP1Q8N556 730 aa17.91■□□□□ 0.46
CLTCL1-210ENST00000617926 L3MBTL2Q969R5 705 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms