RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CAMSAP2Q08AD1 1489 aa22.74■■□□□ 1.23
NR1H3-235ENST00000616973 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
NR1H3-235ENST00000616973 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
NR1H3-235ENST00000616973 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
NR1H3-235ENST00000616973 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
NR1H3-235ENST00000616973 PLEKHD1A6NEE1 506 aa22.7■■□□□ 1.22
NR1H3-235ENST00000616973 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
NR1H3-235ENST00000616973 CFDP1Q9UEE9 299 aaPredicted RBP22.68■■□□□ 1.22
NR1H3-235ENST00000616973 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
NR1H3-235ENST00000616973 DENND4BO75064 1496 aaPredicted RBP22.66■■□□□ 1.22
NR1H3-235ENST00000616973 MIER1Q8N108 512 aa22.66■■□□□ 1.22
NR1H3-235ENST00000616973 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
NR1H3-235ENST00000616973 ADGRL2O95490 1459 aa22.65■■□□□ 1.22
NR1H3-235ENST00000616973 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
NR1H3-235ENST00000616973 ABCC2Q92887 1545 aa22.59■■□□□ 1.21
NR1H3-235ENST00000616973 SHANK2Q9UPX8 1470 aa22.59■■□□□ 1.21
NR1H3-235ENST00000616973 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
NR1H3-235ENST00000616973 NCOA1Q15788 1441 aa22.58■■□□□ 1.21
NR1H3-235ENST00000616973 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.21
NR1H3-235ENST00000616973 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.21
NR1H3-235ENST00000616973 PREX2Q70Z35 1606 aa22.57■■□□□ 1.2
NR1H3-235ENST00000616973 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
NR1H3-235ENST00000616973 MPHOSPH9Q99550 1183 aa22.57■■□□□ 1.2
NR1H3-235ENST00000616973 CDC42BPBQ9Y5S2 1711 aa22.56■■□□□ 1.2
NR1H3-235ENST00000616973 ARHGEF5Q12774 1597 aa22.56■■□□□ 1.2
NR1H3-235ENST00000616973 ANKRD30AQ9BXX3 1397 aa22.52■■□□□ 1.2
NR1H3-235ENST00000616973 ZNF777Q9ULD5 760 aaPredicted RBP22.52■■□□□ 1.2
NR1H3-235ENST00000616973 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
NR1H3-235ENST00000616973 SAMD9LQ8IVG5 1584 aa22.48■■□□□ 1.19
NR1H3-235ENST00000616973 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
NR1H3-235ENST00000616973 PZPP20742 1482 aa22.47■■□□□ 1.19
NR1H3-235ENST00000616973 MYO5CQ9NQX4 1742 aa22.46■■□□□ 1.19
NR1H3-235ENST00000616973 C9orf84Q5VXU9 1444 aa22.46■■□□□ 1.19
NR1H3-235ENST00000616973 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
NR1H3-235ENST00000616973 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
NR1H3-235ENST00000616973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.18
NR1H3-235ENST00000616973 MBD5Q9P267 1494 aa22.45■■□□□ 1.18
NR1H3-235ENST00000616973 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
NR1H3-235ENST00000616973 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
NR1H3-235ENST00000616973 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
NR1H3-235ENST00000616973 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
NR1H3-235ENST00000616973 RSPH4AQ5TD94 716 aa22.41■■□□□ 1.18
NR1H3-235ENST00000616973 MAST1Q9Y2H9 1570 aa22.4■■□□□ 1.18
NR1H3-235ENST00000616973 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
NR1H3-235ENST00000616973 KDM5DQ9BY66 1539 aa22.39■■□□□ 1.18
NR1H3-235ENST00000616973 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
NR1H3-235ENST00000616973 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
NR1H3-235ENST00000616973 ARHGAP5Q13017 1502 aa22.37■■□□□ 1.17
NR1H3-235ENST00000616973 PLEKHH2Q8IVE3 1493 aa22.36■■□□□ 1.17
NR1H3-235ENST00000616973 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
NR1H3-235ENST00000616973 TEX14Q8IWB6 1497 aa22.35■■□□□ 1.17
NR1H3-235ENST00000616973 FOXD1Q16676 465 aa22.35■■□□□ 1.17
NR1H3-235ENST00000616973 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.17
NR1H3-235ENST00000616973 SYCP2Q9BX26 1530 aa22.33■■□□□ 1.17
NR1H3-235ENST00000616973 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
NR1H3-235ENST00000616973 YTHDC1Q96MU7 727 aaKnown RBP22.31■■□□□ 1.16
NR1H3-235ENST00000616973 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
NR1H3-235ENST00000616973 PLXNC1O60486 1568 aa22.3■■□□□ 1.16
NR1H3-235ENST00000616973 PLCH2O75038 1416 aa22.28■■□□□ 1.16
NR1H3-235ENST00000616973 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
NR1H3-235ENST00000616973 ARAP3Q8WWN8 1544 aa22.27■■□□□ 1.16
NR1H3-235ENST00000616973 HIRIP3Q9BW71 556 aaPredicted RBP22.25■■□□□ 1.15
NR1H3-235ENST00000616973 NUP155O75694 1391 aa22.25■■□□□ 1.15
NR1H3-235ENST00000616973 UNC13BO14795 1591 aa22.24■■□□□ 1.15
NR1H3-235ENST00000616973 PKD2Q13563 968 aa22.23■■□□□ 1.15
NR1H3-235ENST00000616973 ABCC1P33527 1531 aa22.22■■□□□ 1.15
NR1H3-235ENST00000616973 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
NR1H3-235ENST00000616973 ARHGEF12Q9NZN5 1544 aa22.2■■□□□ 1.14
NR1H3-235ENST00000616973 EIF4G2P78344 907 aaKnown RBP eCLIP22.19■■□□□ 1.14
NR1H3-235ENST00000616973 POLR1AO95602 1720 aaPredicted RBP22.19■■□□□ 1.14
NR1H3-235ENST00000616973 HSPA5P11021 654 aaKnown RBP22.18■■□□□ 1.14
NR1H3-235ENST00000616973 EFCAB2Q5VUJ9 269 aa22.18■■□□□ 1.14
NR1H3-235ENST00000616973 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
NR1H3-235ENST00000616973 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
NR1H3-235ENST00000616973 DUOX2Q9NRD8 1548 aa22.17■■□□□ 1.14
NR1H3-235ENST00000616973 NBPF8Q3BBV2 869 aa22.17■■□□□ 1.14
NR1H3-235ENST00000616973 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
NR1H3-235ENST00000616973 IQGAP3Q86VI3 1631 aa22.15■■□□□ 1.14
NR1H3-235ENST00000616973 ABCA9Q8IUA7 1624 aa22.15■■□□□ 1.14
NR1H3-235ENST00000616973 ERBINQ96RT1 1412 aa22.12■■□□□ 1.13
NR1H3-235ENST00000616973 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
NR1H3-235ENST00000616973 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
NR1H3-235ENST00000616973 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
NR1H3-235ENST00000616973 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
NR1H3-235ENST00000616973 ANP32CO43423 234 aa22.1■■□□□ 1.13
NR1H3-235ENST00000616973 RTEL1-TNFRSF6BF6WH68 1400 aa22.08■■□□□ 1.13
NR1H3-235ENST00000616973 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.12
NR1H3-235ENST00000616973 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
NR1H3-235ENST00000616973 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
NR1H3-235ENST00000616973 ZFYVE16Q7Z3T8 1539 aa22.03■■□□□ 1.12
NR1H3-235ENST00000616973 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
NR1H3-235ENST00000616973 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
NR1H3-235ENST00000616973 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
NR1H3-235ENST00000616973 FANCAO15360 1455 aa22.01■■□□□ 1.11
NR1H3-235ENST00000616973 KDM5CP41229 1560 aa22.01■■□□□ 1.11
NR1H3-235ENST00000616973 INO80Q9ULG1 1556 aaPredicted RBP22.01■■□□□ 1.11
NR1H3-235ENST00000616973 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
NR1H3-235ENST00000616973 ATP10AO60312 1499 aa22■■□□□ 1.11
NR1H3-235ENST00000616973 DEPDC5O75140 1603 aa21.98■■□□□ 1.11
NR1H3-235ENST00000616973 SPAG9O60271 1321 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms