RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 NCOA2Q15596 1464 aa19.21■□□□□ 0.66
EPHB4-210ENST00000616502 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
EPHB4-210ENST00000616502 ERICH6BQ5W0A0 696 aa19.2■□□□□ 0.66
EPHB4-210ENST00000616502 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
EPHB4-210ENST00000616502 NEFMP07197 916 aa19.2■□□□□ 0.66
EPHB4-210ENST00000616502 WASHC2AQ641Q2 1341 aa19.19■□□□□ 0.66
EPHB4-210ENST00000616502 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
EPHB4-210ENST00000616502 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
EPHB4-210ENST00000616502 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
EPHB4-210ENST00000616502 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
EPHB4-210ENST00000616502 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
EPHB4-210ENST00000616502 IPO9Q96P70 1041 aaKnown RBP19.14■□□□□ 0.66
EPHB4-210ENST00000616502 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.66
EPHB4-210ENST00000616502 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
EPHB4-210ENST00000616502 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
EPHB4-210ENST00000616502 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
EPHB4-210ENST00000616502 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
EPHB4-210ENST00000616502 NUP155O75694 1391 aa19.12■□□□□ 0.65
EPHB4-210ENST00000616502 NPM1P06748 294 aaKnown RBP eCLIP19.11■□□□□ 0.65
EPHB4-210ENST00000616502 MYOM3Q5VTT5 1437 aa19.11■□□□□ 0.65
EPHB4-210ENST00000616502 PTPRKQ15262 1439 aa19.11■□□□□ 0.65
EPHB4-210ENST00000616502 LAMC3Q9Y6N6 1575 aa19.11■□□□□ 0.65
EPHB4-210ENST00000616502 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
EPHB4-210ENST00000616502 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
EPHB4-210ENST00000616502 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
EPHB4-210ENST00000616502 ZBED9Q6R2W3 1325 aa19.08■□□□□ 0.64
EPHB4-210ENST00000616502 ANO8Q9HCE9 1232 aaPredicted RBP19.07■□□□□ 0.64
EPHB4-210ENST00000616502 PTPRGP23470 1445 aa19.06■□□□□ 0.64
EPHB4-210ENST00000616502 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
EPHB4-210ENST00000616502 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
EPHB4-210ENST00000616502 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
EPHB4-210ENST00000616502 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
EPHB4-210ENST00000616502 ARXQ96QS3 562 aa19.01■□□□□ 0.63
EPHB4-210ENST00000616502 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
EPHB4-210ENST00000616502 IL27Q8NEV9 243 aa19■□□□□ 0.63
EPHB4-210ENST00000616502 GGT6Q6P531 493 aa19■□□□□ 0.63
EPHB4-210ENST00000616502 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
EPHB4-210ENST00000616502 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
EPHB4-210ENST00000616502 AFAP1Q8N556 730 aa18.98■□□□□ 0.63
EPHB4-210ENST00000616502 EPRSP07814 1512 aaKnown RBP18.97■□□□□ 0.63
EPHB4-210ENST00000616502 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
EPHB4-210ENST00000616502 EXOC6Q8TAG9 804 aa18.96■□□□□ 0.63
EPHB4-210ENST00000616502 CCDC7Q96M83 1385 aa18.95■□□□□ 0.62
EPHB4-210ENST00000616502 NAIPQ13075 1403 aa18.95■□□□□ 0.62
EPHB4-210ENST00000616502 IFT140Q96RY7 1462 aa18.95■□□□□ 0.62
EPHB4-210ENST00000616502 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
EPHB4-210ENST00000616502 KIF7Q2M1P5 1343 aa18.95■□□□□ 0.62
EPHB4-210ENST00000616502 MLECQ14165 292 aa18.94■□□□□ 0.62
EPHB4-210ENST00000616502 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
EPHB4-210ENST00000616502 CNTLNQ9NXG0 1405 aa18.94■□□□□ 0.62
EPHB4-210ENST00000616502 SLC4A3P48751 1232 aa18.94■□□□□ 0.62
EPHB4-210ENST00000616502 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
EPHB4-210ENST00000616502 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
EPHB4-210ENST00000616502 KIF3BO15066 747 aa18.92■□□□□ 0.62
EPHB4-210ENST00000616502 RCAN3Q9UKA8 241 aa18.92■□□□□ 0.62
EPHB4-210ENST00000616502 IQGAP2Q13576 1575 aa18.91■□□□□ 0.62
EPHB4-210ENST00000616502 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
EPHB4-210ENST00000616502 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
EPHB4-210ENST00000616502 PLIN1O60240 522 aa18.9■□□□□ 0.62
EPHB4-210ENST00000616502 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
EPHB4-210ENST00000616502 PDE4AP27815 886 aa18.9■□□□□ 0.62
EPHB4-210ENST00000616502 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
EPHB4-210ENST00000616502 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
EPHB4-210ENST00000616502 RGS3P49796 1198 aa18.9■□□□□ 0.62
EPHB4-210ENST00000616502 GRIN2AQ12879 1464 aa18.88■□□□□ 0.61
EPHB4-210ENST00000616502 TCERG1O14776 1098 aaKnown RBP18.87■□□□□ 0.61
EPHB4-210ENST00000616502 DDRGK1Q96HY6 314 aa18.86■□□□□ 0.61
EPHB4-210ENST00000616502 CUL7Q14999 1698 aa18.85■□□□□ 0.61
EPHB4-210ENST00000616502 ARHGEF11O15085 1522 aa18.85■□□□□ 0.61
EPHB4-210ENST00000616502 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
EPHB4-210ENST00000616502 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
EPHB4-210ENST00000616502 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
EPHB4-210ENST00000616502 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
EPHB4-210ENST00000616502 HFM1A2PYH4 1435 aa18.84■□□□□ 0.61
EPHB4-210ENST00000616502 STAG3Q9UJ98 1225 aa18.84■□□□□ 0.61
EPHB4-210ENST00000616502 NBPF1Q3BBV0 1214 aa18.83■□□□□ 0.6
EPHB4-210ENST00000616502 RRP1P56182 461 aaKnown RBP18.82■□□□□ 0.6
EPHB4-210ENST00000616502 SKAP1Q86WV1 359 aa18.82■□□□□ 0.6
EPHB4-210ENST00000616502 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
EPHB4-210ENST00000616502 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
EPHB4-210ENST00000616502 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
EPHB4-210ENST00000616502 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
EPHB4-210ENST00000616502 NEUROD2Q15784 382 aa18.77■□□□□ 0.6
EPHB4-210ENST00000616502 DAPK1P53355 1430 aa18.77■□□□□ 0.6
EPHB4-210ENST00000616502 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.59
EPHB4-210ENST00000616502 ABCC5O15440 1437 aa18.77■□□□□ 0.59
EPHB4-210ENST00000616502 WDR43Q15061 677 aaKnown RBP eCLIP18.76■□□□□ 0.59
EPHB4-210ENST00000616502 BRPF3Q9ULD4 1205 aa18.76■□□□□ 0.59
EPHB4-210ENST00000616502 PTPN23Q9H3S7 1636 aa18.76■□□□□ 0.59
EPHB4-210ENST00000616502 STK26Q9P289 416 aa18.76■□□□□ 0.59
EPHB4-210ENST00000616502 EHBP1L1Q8N3D4 1523 aa18.76■□□□□ 0.59
EPHB4-210ENST00000616502 TROQ12816 1431 aaPredicted RBP18.75■□□□□ 0.59
EPHB4-210ENST00000616502 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
EPHB4-210ENST00000616502 USP47Q96K76 1375 aa18.74■□□□□ 0.59
EPHB4-210ENST00000616502 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
EPHB4-210ENST00000616502 CDCA7LQ96GN5 454 aa18.74■□□□□ 0.59
EPHB4-210ENST00000616502 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
EPHB4-210ENST00000616502 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
EPHB4-210ENST00000616502 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
EPHB4-210ENST00000616502 PNISRQ8TF01 805 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms