RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
CACNA1C-231ENST00000616390 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
CACNA1C-231ENST00000616390 BCANQ96GW7 911 aa19.5■□□□□ 0.71
CACNA1C-231ENST00000616390 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
CACNA1C-231ENST00000616390 GCC2Q8IWJ2 1684 aa19.5■□□□□ 0.71
CACNA1C-231ENST00000616390 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
CACNA1C-231ENST00000616390 PLB1Q6P1J6 1458 aa19.49■□□□□ 0.71
CACNA1C-231ENST00000616390 RAPGEF6Q8TEU7 1601 aa19.49■□□□□ 0.71
CACNA1C-231ENST00000616390 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
CACNA1C-231ENST00000616390 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
CACNA1C-231ENST00000616390 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
CACNA1C-231ENST00000616390 DAPK1P53355 1430 aa19.48■□□□□ 0.71
CACNA1C-231ENST00000616390 ABCC5O15440 1437 aa19.46■□□□□ 0.71
CACNA1C-231ENST00000616390 CEP170Q5SW79 1584 aa19.45■□□□□ 0.7
CACNA1C-231ENST00000616390 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
CACNA1C-231ENST00000616390 EIF4G2P78344 907 aaKnown RBP eCLIP19.42■□□□□ 0.7
CACNA1C-231ENST00000616390 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
CACNA1C-231ENST00000616390 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
CACNA1C-231ENST00000616390 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
CACNA1C-231ENST00000616390 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
CACNA1C-231ENST00000616390 FKBP8Q14318 412 aa19.4■□□□□ 0.7
CACNA1C-231ENST00000616390 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.7
CACNA1C-231ENST00000616390 AKNAQ7Z591 1439 aa19.39■□□□□ 0.69
CACNA1C-231ENST00000616390 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
CACNA1C-231ENST00000616390 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
CACNA1C-231ENST00000616390 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
CACNA1C-231ENST00000616390 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
CACNA1C-231ENST00000616390 PLEKHD1A6NEE1 506 aa19.37■□□□□ 0.69
CACNA1C-231ENST00000616390 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
CACNA1C-231ENST00000616390 KIF14Q15058 1648 aa19.37■□□□□ 0.69
CACNA1C-231ENST00000616390 CAMSAP2Q08AD1 1489 aa19.36■□□□□ 0.69
CACNA1C-231ENST00000616390 C11orf95C9JLR9 678 aaPredicted RBP19.35■□□□□ 0.69
CACNA1C-231ENST00000616390 ROCK1Q13464 1354 aa19.35■□□□□ 0.69
CACNA1C-231ENST00000616390 ANKRD30BQ9BXX2 1392 aa19.34■□□□□ 0.69
CACNA1C-231ENST00000616390 POLR3GLQ9BT43 218 aa19.33■□□□□ 0.69
CACNA1C-231ENST00000616390 GPATCH8Q9UKJ3 1502 aaKnown RBP19.33■□□□□ 0.69
CACNA1C-231ENST00000616390 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
CACNA1C-231ENST00000616390 PKD2Q13563 968 aa19.3■□□□□ 0.68
CACNA1C-231ENST00000616390 NCOA1Q15788 1441 aa19.29■□□□□ 0.68
CACNA1C-231ENST00000616390 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
CACNA1C-231ENST00000616390 NEFLP07196 543 aa19.28■□□□□ 0.68
CACNA1C-231ENST00000616390 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
CACNA1C-231ENST00000616390 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.68
CACNA1C-231ENST00000616390 NUP160Q12769 1436 aa19.27■□□□□ 0.68
CACNA1C-231ENST00000616390 CCDC184Q52MB2 194 aa19.27■□□□□ 0.67
CACNA1C-231ENST00000616390 ITSN2Q9NZM3 1697 aa19.26■□□□□ 0.67
CACNA1C-231ENST00000616390 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
CACNA1C-231ENST00000616390 TSPY4P0CV99 314 aa19.24■□□□□ 0.67
CACNA1C-231ENST00000616390 TSPY10P0CW01 314 aa19.24■□□□□ 0.67
CACNA1C-231ENST00000616390 ATP10BO94823 1461 aa19.23■□□□□ 0.67
CACNA1C-231ENST00000616390 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
CACNA1C-231ENST00000616390 PZPP20742 1482 aa19.23■□□□□ 0.67
CACNA1C-231ENST00000616390 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
CACNA1C-231ENST00000616390 TEX14Q8IWB6 1497 aa19.21■□□□□ 0.67
CACNA1C-231ENST00000616390 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
CACNA1C-231ENST00000616390 NUP155O75694 1391 aa19.21■□□□□ 0.66
CACNA1C-231ENST00000616390 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
CACNA1C-231ENST00000616390 IRX6P78412 446 aaPredicted RBP19.2■□□□□ 0.66
CACNA1C-231ENST00000616390 PTPRGP23470 1445 aa19.19■□□□□ 0.66
CACNA1C-231ENST00000616390 CDC42BPAQ5VT25 1732 aa19.19■□□□□ 0.66
CACNA1C-231ENST00000616390 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
CACNA1C-231ENST00000616390 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
CACNA1C-231ENST00000616390 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
CACNA1C-231ENST00000616390 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
CACNA1C-231ENST00000616390 ADCY10Q96PN6 1610 aa19.17■□□□□ 0.66
CACNA1C-231ENST00000616390 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
CACNA1C-231ENST00000616390 ABCA8O94911 1581 aa19.16■□□□□ 0.66
CACNA1C-231ENST00000616390 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
CACNA1C-231ENST00000616390 PRKRIP1Q9H875 184 aaPredicted RBP19.16■□□□□ 0.66
CACNA1C-231ENST00000616390 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
CACNA1C-231ENST00000616390 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.65
CACNA1C-231ENST00000616390 SENP3-EIF4A1A0A087X0R7 540 aa19.13■□□□□ 0.65
CACNA1C-231ENST00000616390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
CACNA1C-231ENST00000616390 ABCC10Q5T3U5 1492 aa19.12■□□□□ 0.65
CACNA1C-231ENST00000616390 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
CACNA1C-231ENST00000616390 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
CACNA1C-231ENST00000616390 DCAF11Q8TEB1 546 aa19.1■□□□□ 0.65
CACNA1C-231ENST00000616390 USP47Q96K76 1375 aa19.09■□□□□ 0.65
CACNA1C-231ENST00000616390 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.65
CACNA1C-231ENST00000616390 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
CACNA1C-231ENST00000616390 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
CACNA1C-231ENST00000616390 CHD1O14646 1710 aa19.06■□□□□ 0.64
CACNA1C-231ENST00000616390 CDC42BPBQ9Y5S2 1711 aa19.01■□□□□ 0.63
CACNA1C-231ENST00000616390 BCORL1Q5H9F3 1711 aa19■□□□□ 0.63
CACNA1C-231ENST00000616390 ST20-MTHFSA0A0A6YYL1 179 aa19■□□□□ 0.63
CACNA1C-231ENST00000616390 UBE2Q2Q8WVN8 375 aa19■□□□□ 0.63
CACNA1C-231ENST00000616390 ERCC6L2Q5T890 1561 aa19■□□□□ 0.63
CACNA1C-231ENST00000616390 MBD5Q9P267 1494 aa19■□□□□ 0.63
CACNA1C-231ENST00000616390 SAMD9LQ8IVG5 1584 aa18.99■□□□□ 0.63
CACNA1C-231ENST00000616390 ARHGAP5Q13017 1502 aa18.99■□□□□ 0.63
CACNA1C-231ENST00000616390 SHANK2Q9UPX8 1470 aa18.98■□□□□ 0.63
CACNA1C-231ENST00000616390 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
CACNA1C-231ENST00000616390 ANP32EQ9BTT0 268 aa18.96■□□□□ 0.63
CACNA1C-231ENST00000616390 SYCP2Q9BX26 1530 aa18.96■□□□□ 0.63
CACNA1C-231ENST00000616390 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
CACNA1C-231ENST00000616390 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
CACNA1C-231ENST00000616390 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
CACNA1C-231ENST00000616390 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
CACNA1C-231ENST00000616390 KDM5CP41229 1560 aa18.93■□□□□ 0.62
CACNA1C-231ENST00000616390 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms