RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 EFCAB5A4FU69 1503 aa11.8□□□□□ -0.52
SPTBN1-207ENST00000615901 NCLP19338 710 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-207ENST00000615901 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-207ENST00000615901 SENP3Q9H4L4 574 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-207ENST00000615901 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
SPTBN1-207ENST00000615901 MORC1Q86VD1 984 aa11.78□□□□□ -0.52
SPTBN1-207ENST00000615901 RUSC2Q8N2Y8 1516 aa11.78□□□□□ -0.52
SPTBN1-207ENST00000615901 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.52
SPTBN1-207ENST00000615901 SYNJ1O43426 1573 aa11.77□□□□□ -0.52
SPTBN1-207ENST00000615901 PHLDB1Q86UU1 1377 aa11.77□□□□□ -0.53
SPTBN1-207ENST00000615901 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-207ENST00000615901 CCDC144AA2RUR9 1427 aa11.76□□□□□ -0.53
SPTBN1-207ENST00000615901 GLIPR1L2Q4G1C9 344 aa11.76□□□□□ -0.53
SPTBN1-207ENST00000615901 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-207ENST00000615901 MYOM3Q5VTT5 1437 aa11.75□□□□□ -0.53
SPTBN1-207ENST00000615901 SPAG9O60271 1321 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-207ENST00000615901 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-207ENST00000615901 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
SPTBN1-207ENST00000615901 CFTRP13569 1480 aa11.74□□□□□ -0.53
SPTBN1-207ENST00000615901 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
SPTBN1-207ENST00000615901 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-207ENST00000615901 A0A0G2JS52 829 aa11.74□□□□□ -0.53
SPTBN1-207ENST00000615901 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
SPTBN1-207ENST00000615901 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
SPTBN1-207ENST00000615901 PTPRGP23470 1445 aa11.73□□□□□ -0.53
SPTBN1-207ENST00000615901 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-207ENST00000615901 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
SPTBN1-207ENST00000615901 LAS1LQ9Y4W2 734 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-207ENST00000615901 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
SPTBN1-207ENST00000615901 FOXD1Q16676 465 aa11.72□□□□□ -0.53
SPTBN1-207ENST00000615901 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-207ENST00000615901 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
SPTBN1-207ENST00000615901 IGF1RP08069 1367 aa11.71□□□□□ -0.53
SPTBN1-207ENST00000615901 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
SPTBN1-207ENST00000615901 GRIN2BQ13224 1484 aa11.71□□□□□ -0.54
SPTBN1-207ENST00000615901 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.54
SPTBN1-207ENST00000615901 EHBP1L1Q8N3D4 1523 aa11.71□□□□□ -0.54
SPTBN1-207ENST00000615901 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
SPTBN1-207ENST00000615901 GGT6Q6P531 493 aa11.7□□□□□ -0.54
SPTBN1-207ENST00000615901 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
SPTBN1-207ENST00000615901 DNMBPQ6XZF7 1577 aa11.69□□□□□ -0.54
SPTBN1-207ENST00000615901 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
SPTBN1-207ENST00000615901 IPO8O15397 1037 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-207ENST00000615901 SUPT6HQ7KZ85 1726 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-207ENST00000615901 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
SPTBN1-207ENST00000615901 RGS3P49796 1198 aa11.67□□□□□ -0.54
SPTBN1-207ENST00000615901 CUL7Q14999 1698 aa11.67□□□□□ -0.54
SPTBN1-207ENST00000615901 L3MBTL2Q969R5 705 aa11.67□□□□□ -0.54
SPTBN1-207ENST00000615901 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-207ENST00000615901 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
SPTBN1-207ENST00000615901 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 HNRNPMP52272 730 aaKnown RBP eCLIP11.66□□□□□ -0.547e-7■■■■□ 21.2
SPTBN1-207ENST00000615901 ZRSR1Q15695 479 aaKnown RBP11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 OS9Q13438 667 aaPredicted RBP11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 MLECQ14165 292 aa11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 KIF3BO15066 747 aa11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 IFT140Q96RY7 1462 aa11.66□□□□□ -0.54
SPTBN1-207ENST00000615901 NLRP13Q86W25 1043 aa11.65□□□□□ -0.54
SPTBN1-207ENST00000615901 TRIM44Q96DX7 344 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-207ENST00000615901 PDE3BQ13370 1112 aa11.65□□□□□ -0.55
SPTBN1-207ENST00000615901 ARXQ96QS3 562 aa11.65□□□□□ -0.55
SPTBN1-207ENST00000615901 NCOA2Q15596 1464 aa11.65□□□□□ -0.55
SPTBN1-207ENST00000615901 WASHC2CQ9Y4E1 1318 aa11.64□□□□□ -0.55
SPTBN1-207ENST00000615901 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-207ENST00000615901 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-207ENST00000615901 USP47Q96K76 1375 aa11.63□□□□□ -0.55
SPTBN1-207ENST00000615901 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
SPTBN1-207ENST00000615901 HSCBQ8IWL3 235 aa11.63□□□□□ -0.55
SPTBN1-207ENST00000615901 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
SPTBN1-207ENST00000615901 MCCP23508 829 aa11.63□□□□□ -0.55
SPTBN1-207ENST00000615901 SAFB2Q14151 953 aaKnown RBP eCLIP11.62□□□□□ -0.55
SPTBN1-207ENST00000615901 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
SPTBN1-207ENST00000615901 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
SPTBN1-207ENST00000615901 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
SPTBN1-207ENST00000615901 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
SPTBN1-207ENST00000615901 STK26Q9P289 416 aa11.62□□□□□ -0.55
SPTBN1-207ENST00000615901 HSP90AB1P08238 724 aaKnown RBP11.61□□□□□ -0.55
SPTBN1-207ENST00000615901 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-207ENST00000615901 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
SPTBN1-207ENST00000615901 EID1Q9Y6B2 187 aa11.61□□□□□ -0.55
SPTBN1-207ENST00000615901 B4GALNT3Q6L9W6 998 aa11.6□□□□□ -0.55
SPTBN1-207ENST00000615901 U2AF1L5P0DN76 240 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-207ENST00000615901 U2AF1Q01081 240 aaKnown RBP eCLIP11.6□□□□□ -0.551e-6■□□□□ 9.6
SPTBN1-207ENST00000615901 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
SPTBN1-207ENST00000615901 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
SPTBN1-207ENST00000615901 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-207ENST00000615901 RRBP1Q9P2E9 1410 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-207ENST00000615901 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
SPTBN1-207ENST00000615901 PLEKHH2Q8IVE3 1493 aa11.59□□□□□ -0.55
SPTBN1-207ENST00000615901 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.552e-7■■■■□ 19.7
SPTBN1-207ENST00000615901 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
SPTBN1-207ENST00000615901 PTMAP06454 111 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-207ENST00000615901 GOLGA6L6A8MZA4 724 aa11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 CGNL1Q0VF96 1302 aa11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 KCNJ4P48050 445 aa11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 MIA2Q96PC5 1412 aa11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 PTMSP20962 102 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 348.7 ms