RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FBLN2P98095 1184 aa11.7□□□□□ -0.54
COL12A1-211ENST00000615798 TAF3Q5VWG9 929 aa11.7□□□□□ -0.54
COL12A1-211ENST00000615798 TPM4P67936 248 aa11.7□□□□□ -0.54
COL12A1-211ENST00000615798 FAM9BQ8IZU0 186 aa11.7□□□□□ -0.54
COL12A1-211ENST00000615798 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-211ENST00000615798 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
COL12A1-211ENST00000615798 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
COL12A1-211ENST00000615798 HOMEZQ8IX15 550 aa11.68□□□□□ -0.54
COL12A1-211ENST00000615798 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
COL12A1-211ENST00000615798 WDR43Q15061 677 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL12A1-211ENST00000615798 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-211ENST00000615798 PRM3Q9NNZ6 103 aa11.67□□□□□ -0.54
COL12A1-211ENST00000615798 PLEKHD1A6NEE1 506 aa11.67□□□□□ -0.54
COL12A1-211ENST00000615798 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
COL12A1-211ENST00000615798 CCDC70Q6NSX1 233 aa11.66□□□□□ -0.54
COL12A1-211ENST00000615798 ROCK2O75116 1388 aaKnown RBP11.65□□□□□ -0.54
COL12A1-211ENST00000615798 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-211ENST00000615798 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.55
COL12A1-211ENST00000615798 PHF14O94880 888 aa11.64□□□□□ -0.55
COL12A1-211ENST00000615798 CUX1P39880 1505 aa11.63□□□□□ -0.55
COL12A1-211ENST00000615798 ZBTB7CA1YPR0 619 aa11.63□□□□□ -0.55
COL12A1-211ENST00000615798 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-211ENST00000615798 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-211ENST00000615798 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
COL12A1-211ENST00000615798 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
COL12A1-211ENST00000615798 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
COL12A1-211ENST00000615798 INCENPQ9NQS7 918 aa11.62□□□□□ -0.55
COL12A1-211ENST00000615798 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
COL12A1-211ENST00000615798 TPM3P06753 285 aa11.61□□□□□ -0.55
COL12A1-211ENST00000615798 HSP90AB3PQ58FF7 597 aa11.61□□□□□ -0.55
COL12A1-211ENST00000615798 AK7Q96M32 723 aa11.61□□□□□ -0.55
COL12A1-211ENST00000615798 ZRSR2Q15696 482 aaKnown RBP11.61□□□□□ -0.55
COL12A1-211ENST00000615798 DCTN1Q14203 1278 aa11.6□□□□□ -0.55
COL12A1-211ENST00000615798 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
COL12A1-211ENST00000615798 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
COL12A1-211ENST00000615798 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
COL12A1-211ENST00000615798 ACBD3Q9H3P7 528 aa11.6□□□□□ -0.55
COL12A1-211ENST00000615798 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
COL12A1-211ENST00000615798 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
COL12A1-211ENST00000615798 DEF6Q9H4E7 631 aa11.59□□□□□ -0.55
COL12A1-211ENST00000615798 FGD1P98174 961 aa11.59□□□□□ -0.55
COL12A1-211ENST00000615798 MS4A1P11836 297 aa11.59□□□□□ -0.55
COL12A1-211ENST00000615798 NEXNQ0ZGT2 675 aa11.59□□□□□ -0.55
COL12A1-211ENST00000615798 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
COL12A1-211ENST00000615798 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL12A1-211ENST00000615798 CLSTN1O94985 981 aa11.58□□□□□ -0.56
COL12A1-211ENST00000615798 USP8P40818 1118 aa11.58□□□□□ -0.56
COL12A1-211ENST00000615798 CDR1P51861 262 aa11.58□□□□□ -0.56
COL12A1-211ENST00000615798 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
COL12A1-211ENST00000615798 MCCP23508 829 aa11.57□□□□□ -0.56
COL12A1-211ENST00000615798 H0YHG0 523 aa11.57□□□□□ -0.56
COL12A1-211ENST00000615798 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
COL12A1-211ENST00000615798 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
COL12A1-211ENST00000615798 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
COL12A1-211ENST00000615798 TPM2P07951 284 aa11.55□□□□□ -0.56
COL12A1-211ENST00000615798 PLCD4Q9BRC7 762 aa11.55□□□□□ -0.56
COL12A1-211ENST00000615798 EFCAB5A4FU69 1503 aa11.55□□□□□ -0.56
COL12A1-211ENST00000615798 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
COL12A1-211ENST00000615798 NCAPD3P42695 1498 aa11.55□□□□□ -0.56
COL12A1-211ENST00000615798 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
COL12A1-211ENST00000615798 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
COL12A1-211ENST00000615798 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
COL12A1-211ENST00000615798 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
COL12A1-211ENST00000615798 FTSJ3Q8IY81 847 aaKnown RBP11.53□□□□□ -0.56
COL12A1-211ENST00000615798 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-211ENST00000615798 RALBP1Q15311 655 aa11.53□□□□□ -0.56
COL12A1-211ENST00000615798 ARGLU1Q9NWB6 273 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-211ENST00000615798 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
COL12A1-211ENST00000615798 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
COL12A1-211ENST00000615798 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.56
COL12A1-211ENST00000615798 TOP2BQ02880 1626 aa11.52□□□□□ -0.57
COL12A1-211ENST00000615798 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
COL12A1-211ENST00000615798 GZF1Q9H116 711 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-211ENST00000615798 CEP89Q96ST8 783 aa11.51□□□□□ -0.57
COL12A1-211ENST00000615798 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-211ENST00000615798 GIMAP7Q8NHV1 300 aa11.51□□□□□ -0.57
COL12A1-211ENST00000615798 CCAR2Q8N163 923 aaKnown RBP11.51□□□□□ -0.57
COL12A1-211ENST00000615798 RUFY1Q96T51 708 aa11.51□□□□□ -0.57
COL12A1-211ENST00000615798 PES1O00541 588 aaKnown RBP11.5□□□□□ -0.57
COL12A1-211ENST00000615798 KCNJ4P48050 445 aa11.5□□□□□ -0.57
COL12A1-211ENST00000615798 KANK1Q14678 1352 aa11.5□□□□□ -0.57
COL12A1-211ENST00000615798 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
COL12A1-211ENST00000615798 KAT6BQ8WYB5 2073 aa11.49□□□□□ -0.57
COL12A1-211ENST00000615798 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
COL12A1-211ENST00000615798 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
COL12A1-211ENST00000615798 GNL2Q13823 731 aaKnown RBP11.49□□□□□ -0.57
COL12A1-211ENST00000615798 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
COL12A1-211ENST00000615798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL12A1-211ENST00000615798 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
COL12A1-211ENST00000615798 EIF3AQ14152 1382 aaKnown RBP11.48□□□□□ -0.57
COL12A1-211ENST00000615798 ESF1Q9H501 851 aaKnown RBP11.48□□□□□ -0.57
COL12A1-211ENST00000615798 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
COL12A1-211ENST00000615798 NAP1L2Q9ULW6 460 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-211ENST00000615798 LEKR1Q6ZMV7 388 aa11.48□□□□□ -0.57
COL12A1-211ENST00000615798 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
COL12A1-211ENST00000615798 MAP3K1Q13233 1512 aa11.47□□□□□ -0.57
COL12A1-211ENST00000615798 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
COL12A1-211ENST00000615798 TMF1P82094 1093 aa11.47□□□□□ -0.57
COL12A1-211ENST00000615798 CCDC9Q9Y3X0 531 aaKnown RBP11.47□□□□□ -0.57
COL12A1-211ENST00000615798 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms