RNA–Protein interactions for RNA: ENST00000615587.4

LRRC41-206, Transcript of leucine rich repeat containing 41, humanhuman

TSL 1 (best) BASIC

Gene LRRC41, Length 2,842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-206ENST00000615587 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
LRRC41-206ENST00000615587 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
LRRC41-206ENST00000615587 PLIN1O60240 522 aa17.14■□□□□ 0.33
LRRC41-206ENST00000615587 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
LRRC41-206ENST00000615587 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
LRRC41-206ENST00000615587 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
LRRC41-206ENST00000615587 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
LRRC41-206ENST00000615587 TMC1Q8TDI8 760 aa17.11■□□□□ 0.33
LRRC41-206ENST00000615587 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
LRRC41-206ENST00000615587 NAIPQ13075 1403 aa17.11■□□□□ 0.33
LRRC41-206ENST00000615587 ARXQ96QS3 562 aa17.11■□□□□ 0.33
LRRC41-206ENST00000615587 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
LRRC41-206ENST00000615587 PTPN23Q9H3S7 1636 aa17.09■□□□□ 0.33
LRRC41-206ENST00000615587 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
LRRC41-206ENST00000615587 POGKQ9P215 609 aa17.07■□□□□ 0.32
LRRC41-206ENST00000615587 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
LRRC41-206ENST00000615587 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
LRRC41-206ENST00000615587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■■□ 20.1
LRRC41-206ENST00000615587 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
LRRC41-206ENST00000615587 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
LRRC41-206ENST00000615587 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
LRRC41-206ENST00000615587 IGF1RP08069 1367 aa17.04■□□□□ 0.32
LRRC41-206ENST00000615587 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
LRRC41-206ENST00000615587 CRBNQ96SW2 442 aa17.03■□□□□ 0.32
LRRC41-206ENST00000615587 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
LRRC41-206ENST00000615587 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.31
LRRC41-206ENST00000615587 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.31
LRRC41-206ENST00000615587 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
LRRC41-206ENST00000615587 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
LRRC41-206ENST00000615587 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
LRRC41-206ENST00000615587 MTUS2Q5JR59 1369 aa16.98■□□□□ 0.31
LRRC41-206ENST00000615587 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
LRRC41-206ENST00000615587 SPATA31E1Q6ZUB1 1445 aa16.97■□□□□ 0.31
LRRC41-206ENST00000615587 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
LRRC41-206ENST00000615587 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
LRRC41-206ENST00000615587 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
LRRC41-206ENST00000615587 RGS3P49796 1198 aa16.95■□□□□ 0.3
LRRC41-206ENST00000615587 PODXL2Q9NZ53 605 aa16.95■□□□□ 0.3
LRRC41-206ENST00000615587 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
LRRC41-206ENST00000615587 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
LRRC41-206ENST00000615587 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
LRRC41-206ENST00000615587 KDM6BO15054 1643 aa16.9■□□□□ 0.3
LRRC41-206ENST00000615587 PANK2Q9BZ23 570 aa16.89■□□□□ 0.29
LRRC41-206ENST00000615587 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
LRRC41-206ENST00000615587 RRP9O43818 475 aaKnown RBP16.88■□□□□ 0.29
LRRC41-206ENST00000615587 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
LRRC41-206ENST00000615587 CFTRP13569 1480 aa16.88■□□□□ 0.29
LRRC41-206ENST00000615587 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
LRRC41-206ENST00000615587 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
LRRC41-206ENST00000615587 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
LRRC41-206ENST00000615587 XRCC6P12956 609 aaKnown RBP eCLIP16.87■□□□□ 0.29
LRRC41-206ENST00000615587 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
LRRC41-206ENST00000615587 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
LRRC41-206ENST00000615587 USP47Q96K76 1375 aa16.85■□□□□ 0.29
LRRC41-206ENST00000615587 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
LRRC41-206ENST00000615587 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
LRRC41-206ENST00000615587 BCORL1Q5H9F3 1711 aa16.83■□□□□ 0.28
LRRC41-206ENST00000615587 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
LRRC41-206ENST00000615587 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
LRRC41-206ENST00000615587 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
LRRC41-206ENST00000615587 CLCN1P35523 988 aa16.82■□□□□ 0.28
LRRC41-206ENST00000615587 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
LRRC41-206ENST00000615587 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
LRRC41-206ENST00000615587 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
LRRC41-206ENST00000615587 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
LRRC41-206ENST00000615587 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
LRRC41-206ENST00000615587 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
LRRC41-206ENST00000615587 BRD4O60885 1362 aaPredicted RBP16.8■□□□□ 0.28
LRRC41-206ENST00000615587 SEC24BO95487 1268 aa16.8■□□□□ 0.28
LRRC41-206ENST00000615587 HECW1Q76N89 1606 aa16.79■□□□□ 0.28
LRRC41-206ENST00000615587 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
LRRC41-206ENST00000615587 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
LRRC41-206ENST00000615587 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
LRRC41-206ENST00000615587 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
LRRC41-206ENST00000615587 USP19O94966 1318 aa16.77■□□□□ 0.27
LRRC41-206ENST00000615587 MIA2Q96PC5 1412 aa16.77■□□□□ 0.27
LRRC41-206ENST00000615587 A0A0U1RQG5 324 aaPredicted RBP16.75■□□□□ 0.27
LRRC41-206ENST00000615587 RALBP1Q15311 655 aa16.75■□□□□ 0.27
LRRC41-206ENST00000615587 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
LRRC41-206ENST00000615587 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
LRRC41-206ENST00000615587 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
LRRC41-206ENST00000615587 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
LRRC41-206ENST00000615587 NLRP13Q86W25 1043 aa16.73■□□□□ 0.27
LRRC41-206ENST00000615587 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
LRRC41-206ENST00000615587 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.26
LRRC41-206ENST00000615587 FSD2A1L4K1 749 aa16.7■□□□□ 0.26
LRRC41-206ENST00000615587 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
LRRC41-206ENST00000615587 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
LRRC41-206ENST00000615587 BECN1Q14457 450 aa16.69■□□□□ 0.26
LRRC41-206ENST00000615587 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
LRRC41-206ENST00000615587 ESPNB1AK53 854 aa16.68■□□□□ 0.26
LRRC41-206ENST00000615587 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
LRRC41-206ENST00000615587 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
LRRC41-206ENST00000615587 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
LRRC41-206ENST00000615587 IGHDP01880 384 aa16.66■□□□□ 0.26
LRRC41-206ENST00000615587 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
LRRC41-206ENST00000615587 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
LRRC41-206ENST00000615587 MCM4P33991 863 aa16.64■□□□□ 0.25
LRRC41-206ENST00000615587 LRRIQ1Q96JM4 1722 aa16.63■□□□□ 0.25
LRRC41-206ENST00000615587 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms