RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 SCAPERQ9BY12 1400 aa30.53■■■□□ 2.48
FAM228B-210ENST00000615575 ARHGEF12Q9NZN5 1544 aa30.52■■■□□ 2.48
FAM228B-210ENST00000615575 PREX1Q8TCU6 1659 aa30.5■■■□□ 2.47
FAM228B-210ENST00000615575 PLCH2O75038 1416 aa30.47■■■□□ 2.47
FAM228B-210ENST00000615575 C9orf84Q5VXU9 1444 aa30.45■■■□□ 2.46
FAM228B-210ENST00000615575 ATP10AO60312 1499 aa30.44■■■□□ 2.46
FAM228B-210ENST00000615575 EEA1Q15075 1411 aa30.44■■■□□ 2.46
FAM228B-210ENST00000615575 CEBPAP49715 358 aaPredicted RBP30.42■■■□□ 2.46
FAM228B-210ENST00000615575 MYO5CQ9NQX4 1742 aa30.42■■■□□ 2.46
FAM228B-210ENST00000615575 STRCQ7RTU9 1775 aa30.41■■■□□ 2.46
FAM228B-210ENST00000615575 KIF14Q15058 1648 aa30.39■■■□□ 2.46
FAM228B-210ENST00000615575 ILDR2Q71H61 639 aa30.35■■■□□ 2.45
FAM228B-210ENST00000615575 DISP3Q9P2K9 1392 aa30.34■■■□□ 2.45
FAM228B-210ENST00000615575 KDM5CP41229 1560 aa30.31■■■□□ 2.44
FAM228B-210ENST00000615575 ZNF518AQ6AHZ1 1483 aa30.3■■■□□ 2.44
FAM228B-210ENST00000615575 DIP2CQ9Y2E4 1556 aa30.3■■■□□ 2.44
FAM228B-210ENST00000615575 EFCAB2Q5VUJ9 269 aa30.29■■■□□ 2.44
FAM228B-210ENST00000615575 UHRF1BP1Q6BDS2 1440 aa30.29■■■□□ 2.44
FAM228B-210ENST00000615575 ATP1B4Q9UN42 357 aaPredicted RBP30.28■■■□□ 2.44
FAM228B-210ENST00000615575 ARHGAP5Q13017 1502 aa30.27■■■□□ 2.44
FAM228B-210ENST00000615575 ABCA6Q8N139 1617 aa30.26■■■□□ 2.43
FAM228B-210ENST00000615575 AFAP1Q8N556 730 aa30.24■■■□□ 2.43
FAM228B-210ENST00000615575 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
FAM228B-210ENST00000615575 C3P01024 1663 aa30.24■■■□□ 2.43
FAM228B-210ENST00000615575 LRRIQ1Q96JM4 1722 aa30.21■■■□□ 2.43
FAM228B-210ENST00000615575 ARHGAP35Q9NRY4 1499 aa30.21■■■□□ 2.43
FAM228B-210ENST00000615575 FMN1Q68DA7 1419 aa30.21■■■□□ 2.43
FAM228B-210ENST00000615575 TROQ12816 1431 aaPredicted RBP30.2■■■□□ 2.43
FAM228B-210ENST00000615575 SPATA31D1Q6ZQQ2 1576 aa30.2■■■□□ 2.42
FAM228B-210ENST00000615575 REREQ9P2R6 1566 aa30.2■■■□□ 2.42
FAM228B-210ENST00000615575 DMRT2Q9Y5R5 561 aa30.18■■■□□ 2.42
FAM228B-210ENST00000615575 SETD1BQ9UPS6 1966 aaKnown RBP30.18■■■□□ 2.42
FAM228B-210ENST00000615575 MYT1LQ9UL68 1186 aa30.17■■■□□ 2.42
FAM228B-210ENST00000615575 CDC42BPBQ9Y5S2 1711 aa30.17■■■□□ 2.42
FAM228B-210ENST00000615575 SOCS7O14512 581 aa30.15■■■□□ 2.42
FAM228B-210ENST00000615575 PTPRTO14522 1441 aa30.14■■■□□ 2.42
FAM228B-210ENST00000615575 LTBP4Q8N2S1 1624 aa30.13■■■□□ 2.41
FAM228B-210ENST00000615575 CDK11AQ9UQ88 783 aaPredicted RBP30.13■■■□□ 2.41
FAM228B-210ENST00000615575 ABCC1P33527 1531 aa30.11■■■□□ 2.41
FAM228B-210ENST00000615575 CLIP1P30622 1438 aa30.11■■■□□ 2.41
FAM228B-210ENST00000615575 TRAPPC8Q9Y2L5 1435 aa30.11■■■□□ 2.41
FAM228B-210ENST00000615575 MLH3Q9UHC1 1453 aa30.11■■■□□ 2.41
FAM228B-210ENST00000615575 PREX2Q70Z35 1606 aa30.1■■■□□ 2.41
FAM228B-210ENST00000615575 ITSN2Q9NZM3 1697 aa30.1■■■□□ 2.41
FAM228B-210ENST00000615575 AGLP35573 1532 aa30.09■■■□□ 2.41
FAM228B-210ENST00000615575 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
FAM228B-210ENST00000615575 NCOA1Q15788 1441 aa30.05■■■□□ 2.4
FAM228B-210ENST00000615575 KIDINS220Q9ULH0 1771 aa30.05■■■□□ 2.4
FAM228B-210ENST00000615575 ESF1Q9H501 851 aaKnown RBP30■■■□□ 2.39
FAM228B-210ENST00000615575 CAMSAP1Q5T5Y3 1602 aa29.98■■■□□ 2.39
FAM228B-210ENST00000615575 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
FAM228B-210ENST00000615575 IQSEC2Q5JU85 1478 aa29.96■■■□□ 2.39
FAM228B-210ENST00000615575 CNTLNQ9NXG0 1405 aa29.95■■■□□ 2.39
FAM228B-210ENST00000615575 MROH2AA6NES4 1674 aa29.93■■■□□ 2.38
FAM228B-210ENST00000615575 SAMD9LQ8IVG5 1584 aa29.92■■■□□ 2.38
FAM228B-210ENST00000615575 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
FAM228B-210ENST00000615575 SYCP2Q9BX26 1530 aa29.88■■■□□ 2.37
FAM228B-210ENST00000615575 NPATQ14207 1427 aa29.88■■■□□ 2.37
FAM228B-210ENST00000615575 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
FAM228B-210ENST00000615575 ZNF335Q9H4Z2 1342 aaPredicted RBP29.86■■■□□ 2.37
FAM228B-210ENST00000615575 NCKAP5LQ9HCH0 1330 aa29.86■■■□□ 2.37
FAM228B-210ENST00000615575 MYO3AQ8NEV4 1616 aa29.85■■■□□ 2.37
FAM228B-210ENST00000615575 CASKIN1Q8WXD9 1431 aa29.85■■■□□ 2.37
FAM228B-210ENST00000615575 CLTCQ00610 1675 aaKnown RBP29.85■■■□□ 2.37
FAM228B-210ENST00000615575 ZNF142P52746 1687 aaPredicted RBP29.84■■■□□ 2.37
FAM228B-210ENST00000615575 ZMYM3Q14202 1370 aa29.82■■■□□ 2.36
FAM228B-210ENST00000615575 ZNF777Q9ULD5 760 aaPredicted RBP29.8■■■□□ 2.36
FAM228B-210ENST00000615575 PLXNC1O60486 1568 aa29.78■■■□□ 2.36
FAM228B-210ENST00000615575 ATP7AQ04656 1500 aa29.78■■■□□ 2.36
FAM228B-210ENST00000615575 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
FAM228B-210ENST00000615575 CEP170BQ9Y4F5 1589 aaPredicted RBP29.77■■■□□ 2.36
FAM228B-210ENST00000615575 SPAG9O60271 1321 aaKnown RBP29.76■■■□□ 2.35
FAM228B-210ENST00000615575 UBAP1LF5GYI3 381 aa29.76■■■□□ 2.35
FAM228B-210ENST00000615575 PLA2R1Q13018 1463 aa29.75■■■□□ 2.35
FAM228B-210ENST00000615575 GPATCH8Q9UKJ3 1502 aaKnown RBP29.74■■■□□ 2.35
FAM228B-210ENST00000615575 TCOF1Q13428 1488 aaKnown RBP29.73■■■□□ 2.35
FAM228B-210ENST00000615575 HNRNPMP52272 730 aaKnown RBP eCLIP29.73■■■□□ 2.35
FAM228B-210ENST00000615575 PTPRKQ15262 1439 aa29.73■■■□□ 2.35
FAM228B-210ENST00000615575 FYCO1Q9BQS8 1478 aa29.72■■■□□ 2.35
FAM228B-210ENST00000615575 A2MP01023 1474 aa29.71■■■□□ 2.35
FAM228B-210ENST00000615575 PKD2Q13563 968 aa29.65■■■□□ 2.34
FAM228B-210ENST00000615575 GGT6Q6P531 493 aa29.64■■■□□ 2.33
FAM228B-210ENST00000615575 KIAA1107Q9UPP5 1409 aa29.62■■■□□ 2.33
FAM228B-210ENST00000615575 PPP6R1Q9UPN7 881 aa29.61■■■□□ 2.33
FAM228B-210ENST00000615575 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
FAM228B-210ENST00000615575 DNMT1P26358 1616 aaKnown RBP29.6■■■□□ 2.33
FAM228B-210ENST00000615575 ADGBQ8N7X0 1667 aa29.6■■■□□ 2.33
FAM228B-210ENST00000615575 PLEKHH2Q8IVE3 1493 aa29.59■■■□□ 2.33
FAM228B-210ENST00000615575 A2ML1A8K2U0 1454 aa29.58■■■□□ 2.33
FAM228B-210ENST00000615575 MED1Q15648 1581 aaPredicted RBP29.58■■■□□ 2.33
FAM228B-210ENST00000615575 CFDP1Q9UEE9 299 aaPredicted RBP29.57■■■□□ 2.32
FAM228B-210ENST00000615575 NEURL4Q96JN8 1562 aa29.56■■■□□ 2.32
FAM228B-210ENST00000615575 POLR1AO95602 1720 aaPredicted RBP29.55■■■□□ 2.32
FAM228B-210ENST00000615575 CCNB3Q8WWL7 1395 aa29.55■■■□□ 2.32
FAM228B-210ENST00000615575 SCAF1Q9H7N4 1312 aaKnown RBP29.53■■■□□ 2.32
FAM228B-210ENST00000615575 HSPA1LP34931 641 aa29.52■■■□□ 2.32
FAM228B-210ENST00000615575 TIAM1Q13009 1591 aa29.5■■■□□ 2.31
FAM228B-210ENST00000615575 ZNF644Q9H582 1327 aaPredicted RBP29.5■■■□□ 2.31
FAM228B-210ENST00000615575 PIP4K2BP78356 416 aa29.5■■■□□ 2.31
FAM228B-210ENST00000615575 MBD5Q9P267 1494 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms