RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DDRGK1Q96HY6 314 aa13.78□□□□□ -0.2
TNFAIP3-208ENST00000615468 ZMYND15Q9H091 742 aa13.78□□□□□ -0.2
TNFAIP3-208ENST00000615468 TCERG1O14776 1098 aaKnown RBP13.77□□□□□ -0.2
TNFAIP3-208ENST00000615468 ZNF777Q9ULD5 760 aaPredicted RBP13.77□□□□□ -0.2
TNFAIP3-208ENST00000615468 NUDCQ9Y266 331 aa13.77□□□□□ -0.2
TNFAIP3-208ENST00000615468 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
TNFAIP3-208ENST00000615468 NAP1L5Q96NT1 182 aaPredicted RBP13.76□□□□□ -0.21
TNFAIP3-208ENST00000615468 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
TNFAIP3-208ENST00000615468 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
TNFAIP3-208ENST00000615468 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
TNFAIP3-208ENST00000615468 RRP7BPQ9NSQ0 103 aa13.75□□□□□ -0.21
TNFAIP3-208ENST00000615468 FAM43AQ8N2R8 423 aa13.73□□□□□ -0.21
TNFAIP3-208ENST00000615468 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
TNFAIP3-208ENST00000615468 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
TNFAIP3-208ENST00000615468 PODXL2Q9NZ53 605 aa13.71□□□□□ -0.21
TNFAIP3-208ENST00000615468 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
TNFAIP3-208ENST00000615468 FRAT2O75474 233 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP3-208ENST00000615468 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
TNFAIP3-208ENST00000615468 LRRC9Q6ZRR7 1453 aa13.68□□□□□ -0.22
TNFAIP3-208ENST00000615468 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
TNFAIP3-208ENST00000615468 FMN1Q68DA7 1419 aa13.67□□□□□ -0.22
TNFAIP3-208ENST00000615468 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
TNFAIP3-208ENST00000615468 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
TNFAIP3-208ENST00000615468 ARID4BQ4LE39 1312 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP3-208ENST00000615468 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
TNFAIP3-208ENST00000615468 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
TNFAIP3-208ENST00000615468 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
TNFAIP3-208ENST00000615468 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
TNFAIP3-208ENST00000615468 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-208ENST00000615468 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
TNFAIP3-208ENST00000615468 PNNQ9H307 717 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-208ENST00000615468 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
TNFAIP3-208ENST00000615468 TIAM1Q13009 1591 aa13.63□□□□□ -0.23
TNFAIP3-208ENST00000615468 MS4A1P11836 297 aa13.63□□□□□ -0.23
TNFAIP3-208ENST00000615468 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
TNFAIP3-208ENST00000615468 CASKIN1Q8WXD9 1431 aa13.61□□□□□ -0.23
TNFAIP3-208ENST00000615468 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
TNFAIP3-208ENST00000615468 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
TNFAIP3-208ENST00000615468 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-208ENST00000615468 FOXD1Q16676 465 aa13.59□□□□□ -0.23
TNFAIP3-208ENST00000615468 CUL7Q14999 1698 aa13.59□□□□□ -0.23
TNFAIP3-208ENST00000615468 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-208ENST00000615468 RRAGDQ9NQL2 400 aaPredicted RBP13.58□□□□□ -0.23
TNFAIP3-208ENST00000615468 CCDC7Q96M83 1385 aa13.58□□□□□ -0.24
TNFAIP3-208ENST00000615468 PLIN1O60240 522 aa13.57□□□□□ -0.24
TNFAIP3-208ENST00000615468 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
TNFAIP3-208ENST00000615468 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-208ENST00000615468 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-208ENST00000615468 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-208ENST00000615468 RGS3P49796 1198 aa13.55□□□□□ -0.24
TNFAIP3-208ENST00000615468 POGKQ9P215 609 aa13.55□□□□□ -0.24
TNFAIP3-208ENST00000615468 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
TNFAIP3-208ENST00000615468 RNF123Q5XPI4 1314 aa13.55□□□□□ -0.24
TNFAIP3-208ENST00000615468 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
TNFAIP3-208ENST00000615468 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-208ENST00000615468 SLKQ9H2G2 1235 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP3-208ENST00000615468 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-208ENST00000615468 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
TNFAIP3-208ENST00000615468 KIF7Q2M1P5 1343 aa13.52□□□□□ -0.24
TNFAIP3-208ENST00000615468 RRP9O43818 475 aaKnown RBP13.52□□□□□ -0.25
TNFAIP3-208ENST00000615468 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
TNFAIP3-208ENST00000615468 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
TNFAIP3-208ENST00000615468 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.25
TNFAIP3-208ENST00000615468 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP3-208ENST00000615468 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
TNFAIP3-208ENST00000615468 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
TNFAIP3-208ENST00000615468 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
TNFAIP3-208ENST00000615468 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
TNFAIP3-208ENST00000615468 CTTNBP2Q8WZ74 1663 aa13.49□□□□□ -0.25
TNFAIP3-208ENST00000615468 PLB1Q6P1J6 1458 aa13.47□□□□□ -0.25
TNFAIP3-208ENST00000615468 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
TNFAIP3-208ENST00000615468 WDR62O43379 1518 aa13.46□□□□□ -0.25
TNFAIP3-208ENST00000615468 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
TNFAIP3-208ENST00000615468 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-208ENST00000615468 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
TNFAIP3-208ENST00000615468 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-208ENST00000615468 PRG4Q92954 1404 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP3-208ENST00000615468 MYOM3Q5VTT5 1437 aa13.46□□□□□ -0.26
TNFAIP3-208ENST00000615468 PBRM1Q86U86 1689 aa13.45□□□□□ -0.26
TNFAIP3-208ENST00000615468 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
TNFAIP3-208ENST00000615468 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
TNFAIP3-208ENST00000615468 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
TNFAIP3-208ENST00000615468 CARMIL2Q6F5E8 1435 aa13.45□□□□□ -0.26
TNFAIP3-208ENST00000615468 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-208ENST00000615468 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
TNFAIP3-208ENST00000615468 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-208ENST00000615468 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
TNFAIP3-208ENST00000615468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.269e-8■■□□□ 12.2
TNFAIP3-208ENST00000615468 BECN1Q14457 450 aa13.42□□□□□ -0.26
TNFAIP3-208ENST00000615468 NCOA1Q15788 1441 aa13.42□□□□□ -0.26
TNFAIP3-208ENST00000615468 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.26
TNFAIP3-208ENST00000615468 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
TNFAIP3-208ENST00000615468 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
TNFAIP3-208ENST00000615468 TRIM44Q96DX7 344 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP3-208ENST00000615468 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
TNFAIP3-208ENST00000615468 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-208ENST00000615468 PTPRGP23470 1445 aa13.39□□□□□ -0.27
TNFAIP3-208ENST00000615468 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
TNFAIP3-208ENST00000615468 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
TNFAIP3-208ENST00000615468 CLCN1P35523 988 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms