RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 CHD1O14646 1710 aa12.99□□□□□ -0.33
MSRB3-212ENST00000614640 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
MSRB3-212ENST00000614640 MIA2Q96PC5 1412 aa12.98□□□□□ -0.33
MSRB3-212ENST00000614640 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
MSRB3-212ENST00000614640 TROQ12816 1431 aaPredicted RBP12.97□□□□□ -0.33
MSRB3-212ENST00000614640 NUP153P49790 1475 aaKnown RBP12.97□□□□□ -0.33
MSRB3-212ENST00000614640 CHIC2Q9UKJ5 165 aa12.96□□□□□ -0.33
MSRB3-212ENST00000614640 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
MSRB3-212ENST00000614640 TSPY4P0CV99 314 aa12.92□□□□□ -0.34
MSRB3-212ENST00000614640 TSPY10P0CW01 314 aa12.92□□□□□ -0.34
MSRB3-212ENST00000614640 TRIM52Q96A61 297 aa12.91□□□□□ -0.34
MSRB3-212ENST00000614640 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
MSRB3-212ENST00000614640 DAPK1P53355 1430 aa12.9□□□□□ -0.34
MSRB3-212ENST00000614640 ABCC5O15440 1437 aa12.89□□□□□ -0.35
MSRB3-212ENST00000614640 ATP10BO94823 1461 aa12.89□□□□□ -0.35
MSRB3-212ENST00000614640 MPHOSPH9Q99550 1183 aa12.88□□□□□ -0.35
MSRB3-212ENST00000614640 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
MSRB3-212ENST00000614640 ROCK1Q13464 1354 aa12.88□□□□□ -0.35
MSRB3-212ENST00000614640 ABCA8O94911 1581 aa12.88□□□□□ -0.35
MSRB3-212ENST00000614640 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
MSRB3-212ENST00000614640 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
MSRB3-212ENST00000614640 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
MSRB3-212ENST00000614640 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
MSRB3-212ENST00000614640 ANP32CO43423 234 aa12.85□□□□□ -0.35
MSRB3-212ENST00000614640 FOXD1Q16676 465 aa12.85□□□□□ -0.35
MSRB3-212ENST00000614640 KIF14Q15058 1648 aa12.84□□□□□ -0.35
MSRB3-212ENST00000614640 ABCC2Q92887 1545 aa12.84□□□□□ -0.35
MSRB3-212ENST00000614640 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
MSRB3-212ENST00000614640 EFCAB2Q5VUJ9 269 aa12.84□□□□□ -0.35
MSRB3-212ENST00000614640 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
MSRB3-212ENST00000614640 ANKRD30BQ9BXX2 1392 aa12.83□□□□□ -0.36
MSRB3-212ENST00000614640 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
MSRB3-212ENST00000614640 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
MSRB3-212ENST00000614640 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
MSRB3-212ENST00000614640 RPRD2Q5VT52 1461 aaKnown RBP12.81□□□□□ -0.36
MSRB3-212ENST00000614640 CAMSAP2Q08AD1 1489 aa12.81□□□□□ -0.36
MSRB3-212ENST00000614640 TEX14Q8IWB6 1497 aa12.81□□□□□ -0.36
MSRB3-212ENST00000614640 GPATCH8Q9UKJ3 1502 aaKnown RBP12.81□□□□□ -0.36
MSRB3-212ENST00000614640 ITSN2Q9NZM3 1697 aa12.81□□□□□ -0.36
MSRB3-212ENST00000614640 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
MSRB3-212ENST00000614640 UHRF1BP1LA0JNW5 1464 aa12.8□□□□□ -0.36
MSRB3-212ENST00000614640 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
MSRB3-212ENST00000614640 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
MSRB3-212ENST00000614640 PZPP20742 1482 aa12.78□□□□□ -0.36
MSRB3-212ENST00000614640 NCOA1Q15788 1441 aa12.77□□□□□ -0.36
MSRB3-212ENST00000614640 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.37
MSRB3-212ENST00000614640 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
MSRB3-212ENST00000614640 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
MSRB3-212ENST00000614640 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
MSRB3-212ENST00000614640 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
MSRB3-212ENST00000614640 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
MSRB3-212ENST00000614640 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
MSRB3-212ENST00000614640 CDC42BPAQ5VT25 1732 aa12.75□□□□□ -0.37
MSRB3-212ENST00000614640 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
MSRB3-212ENST00000614640 ARHGAP5Q13017 1502 aa12.75□□□□□ -0.37
MSRB3-212ENST00000614640 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
MSRB3-212ENST00000614640 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
MSRB3-212ENST00000614640 CNTLNQ9NXG0 1405 aa12.73□□□□□ -0.37
MSRB3-212ENST00000614640 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
MSRB3-212ENST00000614640 POLR1AO95602 1720 aaPredicted RBP12.72□□□□□ -0.37
MSRB3-212ENST00000614640 FKBP8Q14318 412 aa12.72□□□□□ -0.37
MSRB3-212ENST00000614640 MBD5Q9P267 1494 aa12.71□□□□□ -0.37
MSRB3-212ENST00000614640 CCDC7Q96M83 1385 aa12.71□□□□□ -0.37
MSRB3-212ENST00000614640 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.38
MSRB3-212ENST00000614640 WDR7Q9Y4E6 1490 aa12.69□□□□□ -0.38
MSRB3-212ENST00000614640 BCANQ96GW7 911 aa12.69□□□□□ -0.38
MSRB3-212ENST00000614640 KIAA1107Q9UPP5 1409 aa12.69□□□□□ -0.38
MSRB3-212ENST00000614640 C9orf84Q5VXU9 1444 aa12.68□□□□□ -0.38
MSRB3-212ENST00000614640 CCDC184Q52MB2 194 aa12.68□□□□□ -0.38
MSRB3-212ENST00000614640 PLCH2O75038 1416 aa12.68□□□□□ -0.38
MSRB3-212ENST00000614640 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
MSRB3-212ENST00000614640 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
MSRB3-212ENST00000614640 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
MSRB3-212ENST00000614640 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
MSRB3-212ENST00000614640 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
MSRB3-212ENST00000614640 ZCCHC11Q5TAX3 1644 aaKnown RBP12.66□□□□□ -0.38
MSRB3-212ENST00000614640 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
MSRB3-212ENST00000614640 KIF15Q9NS87 1388 aa12.66□□□□□ -0.38
MSRB3-212ENST00000614640 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
MSRB3-212ENST00000614640 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.39
MSRB3-212ENST00000614640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.39
MSRB3-212ENST00000614640 HNRNPUQ00839 825 aaKnown RBP eCLIP12.64□□□□□ -0.39
MSRB3-212ENST00000614640 PKD2Q13563 968 aa12.64□□□□□ -0.39
MSRB3-212ENST00000614640 KDM5DQ9BY66 1539 aa12.63□□□□□ -0.39
MSRB3-212ENST00000614640 NUP155O75694 1391 aa12.63□□□□□ -0.39
MSRB3-212ENST00000614640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39
MSRB3-212ENST00000614640 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
MSRB3-212ENST00000614640 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
MSRB3-212ENST00000614640 KDM5CP41229 1560 aa12.62□□□□□ -0.39
MSRB3-212ENST00000614640 SAMD9LQ8IVG5 1584 aa12.61□□□□□ -0.39
MSRB3-212ENST00000614640 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
MSRB3-212ENST00000614640 PREX2Q70Z35 1606 aa12.6□□□□□ -0.39
MSRB3-212ENST00000614640 NEFLP07196 543 aa12.6□□□□□ -0.39
MSRB3-212ENST00000614640 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
MSRB3-212ENST00000614640 FANCAO15360 1455 aa12.59□□□□□ -0.39
MSRB3-212ENST00000614640 USP47Q96K76 1375 aa12.58□□□□□ -0.4
MSRB3-212ENST00000614640 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
MSRB3-212ENST00000614640 DHX29Q7Z478 1369 aaKnown RBP12.58□□□□□ -0.4
MSRB3-212ENST00000614640 KANK1Q14678 1352 aa12.58□□□□□ -0.4
MSRB3-212ENST00000614640 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms