RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
CDH4-203ENST00000614565 KIF27Q86VH2 1401 aa16.52■□□□□ 0.24
CDH4-203ENST00000614565 CUX2O14529 1486 aa16.52■□□□□ 0.23
CDH4-203ENST00000614565 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.23
CDH4-203ENST00000614565 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.23
CDH4-203ENST00000614565 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
CDH4-203ENST00000614565 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
CDH4-203ENST00000614565 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
CDH4-203ENST00000614565 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH4-203ENST00000614565 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
CDH4-203ENST00000614565 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
CDH4-203ENST00000614565 ATF3P18847 181 aa16.48■□□□□ 0.23
CDH4-203ENST00000614565 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
CDH4-203ENST00000614565 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
CDH4-203ENST00000614565 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
CDH4-203ENST00000614565 KRI1Q8N9T8 703 aaKnown RBP16.45■□□□□ 0.22
CDH4-203ENST00000614565 FOXD1Q16676 465 aa16.45■□□□□ 0.22
CDH4-203ENST00000614565 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
CDH4-203ENST00000614565 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
CDH4-203ENST00000614565 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
CDH4-203ENST00000614565 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
CDH4-203ENST00000614565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDH4-203ENST00000614565 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
CDH4-203ENST00000614565 FGD1P98174 961 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
CDH4-203ENST00000614565 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 AMPHP49418 695 aa16.41■□□□□ 0.22
CDH4-203ENST00000614565 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
CDH4-203ENST00000614565 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
CDH4-203ENST00000614565 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
CDH4-203ENST00000614565 PSME1Q06323 249 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 KCNJ4P48050 445 aa16.37■□□□□ 0.21
CDH4-203ENST00000614565 NBR1Q14596 966 aa16.36■□□□□ 0.21
CDH4-203ENST00000614565 RAD21O60216 631 aa16.36■□□□□ 0.21
CDH4-203ENST00000614565 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
CDH4-203ENST00000614565 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
CDH4-203ENST00000614565 PRM3Q9NNZ6 103 aa16.35■□□□□ 0.21
CDH4-203ENST00000614565 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
CDH4-203ENST00000614565 APBB1O00213 710 aa16.34■□□□□ 0.21
CDH4-203ENST00000614565 FKBP8Q14318 412 aa16.34■□□□□ 0.21
CDH4-203ENST00000614565 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
CDH4-203ENST00000614565 MIER1Q8N108 512 aa16.33■□□□□ 0.2
CDH4-203ENST00000614565 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
CDH4-203ENST00000614565 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
CDH4-203ENST00000614565 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
CDH4-203ENST00000614565 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
CDH4-203ENST00000614565 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
CDH4-203ENST00000614565 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
CDH4-203ENST00000614565 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
CDH4-203ENST00000614565 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
CDH4-203ENST00000614565 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
CDH4-203ENST00000614565 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.19
CDH4-203ENST00000614565 PROSER2Q86WR7 435 aaPredicted RBP16.26■□□□□ 0.19
CDH4-203ENST00000614565 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
CDH4-203ENST00000614565 TMF1P82094 1093 aa16.24■□□□□ 0.19
CDH4-203ENST00000614565 PKD2Q13563 968 aa16.24■□□□□ 0.19
CDH4-203ENST00000614565 KIF21BO75037 1637 aa16.23■□□□□ 0.19
CDH4-203ENST00000614565 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
CDH4-203ENST00000614565 CASC1Q6TDU7 716 aa16.22■□□□□ 0.19
CDH4-203ENST00000614565 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
CDH4-203ENST00000614565 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
CDH4-203ENST00000614565 CTDP1Q9Y5B0 961 aaPredicted RBP16.22■□□□□ 0.19
CDH4-203ENST00000614565 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
CDH4-203ENST00000614565 FAM177BA6PVY3 158 aa16.2■□□□□ 0.18
CDH4-203ENST00000614565 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
CDH4-203ENST00000614565 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
CDH4-203ENST00000614565 PTPRGP23470 1445 aa16.19■□□□□ 0.18
CDH4-203ENST00000614565 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
CDH4-203ENST00000614565 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
CDH4-203ENST00000614565 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
CDH4-203ENST00000614565 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
CDH4-203ENST00000614565 TOMM22Q9NS69 142 aa16.15■□□□□ 0.18
CDH4-203ENST00000614565 ADAMTS2O95450 1211 aa16.15■□□□□ 0.18
CDH4-203ENST00000614565 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
CDH4-203ENST00000614565 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDH4-203ENST00000614565 PDE4CQ08493 712 aa16.15■□□□□ 0.18
CDH4-203ENST00000614565 NUP155O75694 1391 aa16.14■□□□□ 0.17
CDH4-203ENST00000614565 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
CDH4-203ENST00000614565 PRXQ9BXM0 1461 aa16.13■□□□□ 0.17
CDH4-203ENST00000614565 SLC4A10Q6U841 1118 aa16.13■□□□□ 0.17
CDH4-203ENST00000614565 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
CDH4-203ENST00000614565 TTC5Q8N0Z6 440 aa16.12■□□□□ 0.17
CDH4-203ENST00000614565 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
CDH4-203ENST00000614565 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
CDH4-203ENST00000614565 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
CDH4-203ENST00000614565 GRM1Q13255 1194 aa16.11■□□□□ 0.17
CDH4-203ENST00000614565 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
CDH4-203ENST00000614565 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
CDH4-203ENST00000614565 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
CDH4-203ENST00000614565 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.17
CDH4-203ENST00000614565 TXNDC2Q86VQ3 553 aa16.08■□□□□ 0.17
CDH4-203ENST00000614565 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.17
CDH4-203ENST00000614565 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.16
CDH4-203ENST00000614565 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
CDH4-203ENST00000614565 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms