RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
TUBD1-216ENST00000613721 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
TUBD1-216ENST00000613721 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
TUBD1-216ENST00000613721 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
TUBD1-216ENST00000613721 KIF14Q15058 1648 aa17.07■□□□□ 0.32
TUBD1-216ENST00000613721 ABCA8O94911 1581 aa17.06■□□□□ 0.32
TUBD1-216ENST00000613721 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
TUBD1-216ENST00000613721 PTPRGP23470 1445 aa17.05■□□□□ 0.32
TUBD1-216ENST00000613721 ATP10BO94823 1461 aa17.03■□□□□ 0.32
TUBD1-216ENST00000613721 TROQ12816 1431 aaPredicted RBP17.03■□□□□ 0.32
TUBD1-216ENST00000613721 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
TUBD1-216ENST00000613721 CDK11AQ9UQ88 783 aaPredicted RBP17.01■□□□□ 0.31
TUBD1-216ENST00000613721 KDM6BO15054 1643 aa17.01■□□□□ 0.31
TUBD1-216ENST00000613721 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
TUBD1-216ENST00000613721 ZNF777Q9ULD5 760 aaPredicted RBP17■□□□□ 0.31
TUBD1-216ENST00000613721 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
TUBD1-216ENST00000613721 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
TUBD1-216ENST00000613721 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
TUBD1-216ENST00000613721 DAPK1P53355 1430 aa16.97■□□□□ 0.31
TUBD1-216ENST00000613721 CLASP1Q7Z460 1538 aa16.97■□□□□ 0.31
TUBD1-216ENST00000613721 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.31
TUBD1-216ENST00000613721 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
TUBD1-216ENST00000613721 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
TUBD1-216ENST00000613721 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
TUBD1-216ENST00000613721 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
TUBD1-216ENST00000613721 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
TUBD1-216ENST00000613721 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
TUBD1-216ENST00000613721 ABCC5O15440 1437 aa16.93■□□□□ 0.3
TUBD1-216ENST00000613721 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
TUBD1-216ENST00000613721 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
TUBD1-216ENST00000613721 KCNH8Q96L42 1107 aa16.91■□□□□ 0.3
TUBD1-216ENST00000613721 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.3
TUBD1-216ENST00000613721 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
TUBD1-216ENST00000613721 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
TUBD1-216ENST00000613721 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
TUBD1-216ENST00000613721 ANP32CO43423 234 aa16.85■□□□□ 0.29
TUBD1-216ENST00000613721 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
TUBD1-216ENST00000613721 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
TUBD1-216ENST00000613721 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
TUBD1-216ENST00000613721 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
TUBD1-216ENST00000613721 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
TUBD1-216ENST00000613721 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
TUBD1-216ENST00000613721 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
TUBD1-216ENST00000613721 SUPT16HQ9Y5B9 1047 aaKnown RBP16.8■□□□□ 0.28
TUBD1-216ENST00000613721 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
TUBD1-216ENST00000613721 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
TUBD1-216ENST00000613721 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
TUBD1-216ENST00000613721 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
TUBD1-216ENST00000613721 L3MBTL2Q969R5 705 aa16.78■□□□□ 0.28
TUBD1-216ENST00000613721 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.28
TUBD1-216ENST00000613721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.28
TUBD1-216ENST00000613721 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.28
TUBD1-216ENST00000613721 MYT1Q01538 1121 aa16.77■□□□□ 0.27
TUBD1-216ENST00000613721 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.27
TUBD1-216ENST00000613721 PZPP20742 1482 aa16.76■□□□□ 0.27
TUBD1-216ENST00000613721 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
TUBD1-216ENST00000613721 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
TUBD1-216ENST00000613721 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
TUBD1-216ENST00000613721 WASHC2AQ641Q2 1341 aa16.73■□□□□ 0.27
TUBD1-216ENST00000613721 ANKRD30AQ9BXX3 1397 aa16.73■□□□□ 0.27
TUBD1-216ENST00000613721 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
TUBD1-216ENST00000613721 ARHGAP5Q13017 1502 aa16.72■□□□□ 0.27
TUBD1-216ENST00000613721 SHANK2Q9UPX8 1470 aa16.72■□□□□ 0.27
TUBD1-216ENST00000613721 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
TUBD1-216ENST00000613721 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
TUBD1-216ENST00000613721 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
TUBD1-216ENST00000613721 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
TUBD1-216ENST00000613721 POLR1AO95602 1720 aaPredicted RBP16.69■□□□□ 0.26
TUBD1-216ENST00000613721 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
TUBD1-216ENST00000613721 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
TUBD1-216ENST00000613721 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
TUBD1-216ENST00000613721 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
TUBD1-216ENST00000613721 MYO5CQ9NQX4 1742 aa16.66■□□□□ 0.26
TUBD1-216ENST00000613721 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
TUBD1-216ENST00000613721 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
TUBD1-216ENST00000613721 ARHGEF12Q9NZN5 1544 aa16.65■□□□□ 0.26
TUBD1-216ENST00000613721 ARHGEF5Q12774 1597 aa16.65■□□□□ 0.26
TUBD1-216ENST00000613721 CCDC7Q96M83 1385 aa16.64■□□□□ 0.25
TUBD1-216ENST00000613721 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
TUBD1-216ENST00000613721 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
TUBD1-216ENST00000613721 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
TUBD1-216ENST00000613721 KDM5DQ9BY66 1539 aa16.61■□□□□ 0.25
TUBD1-216ENST00000613721 PKD2Q13563 968 aa16.61■□□□□ 0.25
TUBD1-216ENST00000613721 C11orf95C9JLR9 678 aaPredicted RBP16.6■□□□□ 0.25
TUBD1-216ENST00000613721 PLCH2O75038 1416 aa16.6■□□□□ 0.25
TUBD1-216ENST00000613721 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
TUBD1-216ENST00000613721 NUP155O75694 1391 aa16.58■□□□□ 0.24
TUBD1-216ENST00000613721 TRAPPC8Q9Y2L5 1435 aa16.57■□□□□ 0.24
TUBD1-216ENST00000613721 FKBP8Q14318 412 aa16.57■□□□□ 0.24
TUBD1-216ENST00000613721 ASXL2Q76L83 1435 aa16.57■□□□□ 0.24
TUBD1-216ENST00000613721 NEFLP07196 543 aa16.56■□□□□ 0.24
TUBD1-216ENST00000613721 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
TUBD1-216ENST00000613721 KIF7Q2M1P5 1343 aa16.55■□□□□ 0.24
TUBD1-216ENST00000613721 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
TUBD1-216ENST00000613721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
TUBD1-216ENST00000613721 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
TUBD1-216ENST00000613721 ABCC1P33527 1531 aa16.53■□□□□ 0.24
TUBD1-216ENST00000613721 KDM5CP41229 1560 aa16.53■□□□□ 0.24
TUBD1-216ENST00000613721 PRKRIP1Q9H875 184 aaPredicted RBP16.53■□□□□ 0.24
TUBD1-216ENST00000613721 USP47Q96K76 1375 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms