RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 ARID4BQ4LE39 1312 aaPredicted RBP17.08■□□□□ 0.33
TRAK1-210ENST00000613405 POGKQ9P215 609 aa17.08■□□□□ 0.33
TRAK1-210ENST00000613405 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.32
TRAK1-210ENST00000613405 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
TRAK1-210ENST00000613405 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
TRAK1-210ENST00000613405 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAK1-210ENST00000613405 RCAN3Q9UKA8 241 aa17.07■□□□□ 0.32
TRAK1-210ENST00000613405 GGT6Q6P531 493 aa17.06■□□□□ 0.32
TRAK1-210ENST00000613405 C14orf37Q86TY3 774 aa17.06■□□□□ 0.32
TRAK1-210ENST00000613405 EFCAB2Q5VUJ9 269 aa17.06■□□□□ 0.32
TRAK1-210ENST00000613405 KANK1Q14678 1352 aa17.04■□□□□ 0.32
TRAK1-210ENST00000613405 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
TRAK1-210ENST00000613405 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
TRAK1-210ENST00000613405 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
TRAK1-210ENST00000613405 ZBTB7CA1YPR0 619 aa17.02■□□□□ 0.32
TRAK1-210ENST00000613405 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
TRAK1-210ENST00000613405 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
TRAK1-210ENST00000613405 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
TRAK1-210ENST00000613405 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAK1-210ENST00000613405 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
TRAK1-210ENST00000613405 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
TRAK1-210ENST00000613405 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
TRAK1-210ENST00000613405 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
TRAK1-210ENST00000613405 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
TRAK1-210ENST00000613405 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
TRAK1-210ENST00000613405 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
TRAK1-210ENST00000613405 SLKQ9H2G2 1235 aaPredicted RBP16.98■□□□□ 0.31
TRAK1-210ENST00000613405 MLECQ14165 292 aa16.97■□□□□ 0.31
TRAK1-210ENST00000613405 CASC1Q6TDU7 716 aa16.97■□□□□ 0.31
TRAK1-210ENST00000613405 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
TRAK1-210ENST00000613405 KIF3BO15066 747 aa16.95■□□□□ 0.3
TRAK1-210ENST00000613405 MS4A1P11836 297 aa16.95■□□□□ 0.3
TRAK1-210ENST00000613405 SRPK2P78362 688 aaKnown RBP16.95■□□□□ 0.3
TRAK1-210ENST00000613405 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
TRAK1-210ENST00000613405 KIF21BO75037 1637 aa16.94■□□□□ 0.3
TRAK1-210ENST00000613405 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
TRAK1-210ENST00000613405 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
TRAK1-210ENST00000613405 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
TRAK1-210ENST00000613405 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
TRAK1-210ENST00000613405 STK26Q9P289 416 aa16.92■□□□□ 0.3
TRAK1-210ENST00000613405 RALBP1Q15311 655 aa16.92■□□□□ 0.3
TRAK1-210ENST00000613405 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
TRAK1-210ENST00000613405 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
TRAK1-210ENST00000613405 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
TRAK1-210ENST00000613405 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
TRAK1-210ENST00000613405 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
TRAK1-210ENST00000613405 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
TRAK1-210ENST00000613405 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
TRAK1-210ENST00000613405 PDE4AP27815 886 aa16.87■□□□□ 0.29
TRAK1-210ENST00000613405 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
TRAK1-210ENST00000613405 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
TRAK1-210ENST00000613405 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
TRAK1-210ENST00000613405 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
TRAK1-210ENST00000613405 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
TRAK1-210ENST00000613405 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
TRAK1-210ENST00000613405 SOX12O15370 315 aa16.85■□□□□ 0.29
TRAK1-210ENST00000613405 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
TRAK1-210ENST00000613405 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
TRAK1-210ENST00000613405 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
TRAK1-210ENST00000613405 PTPRGP23470 1445 aa16.83■□□□□ 0.29
TRAK1-210ENST00000613405 GOLGA6L3A6NEY3 463 aa16.83■□□□□ 0.29
TRAK1-210ENST00000613405 A0A0G2JS52 829 aa16.83■□□□□ 0.28
TRAK1-210ENST00000613405 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
TRAK1-210ENST00000613405 LRRC9Q6ZRR7 1453 aa16.82■□□□□ 0.28
TRAK1-210ENST00000613405 GBP4Q96PP9 640 aa16.82■□□□□ 0.28
TRAK1-210ENST00000613405 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
TRAK1-210ENST00000613405 GSE1Q14687 1217 aa16.82■□□□□ 0.28
TRAK1-210ENST00000613405 CFTRP13569 1480 aa16.81■□□□□ 0.28
TRAK1-210ENST00000613405 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
TRAK1-210ENST00000613405 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAK1-210ENST00000613405 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
TRAK1-210ENST00000613405 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
TRAK1-210ENST00000613405 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.282e-8■■■■□ 22.9
TRAK1-210ENST00000613405 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
TRAK1-210ENST00000613405 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
TRAK1-210ENST00000613405 GOLGA2Q08379 1002 aa16.78■□□□□ 0.28
TRAK1-210ENST00000613405 NUTM2DQ5VT03 806 aaPredicted RBP16.78■□□□□ 0.28
TRAK1-210ENST00000613405 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
TRAK1-210ENST00000613405 HDGFP51858 240 aaKnown RBP16.77■□□□□ 0.28
TRAK1-210ENST00000613405 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
TRAK1-210ENST00000613405 USP47Q96K76 1375 aa16.76■□□□□ 0.27
TRAK1-210ENST00000613405 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
TRAK1-210ENST00000613405 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
TRAK1-210ENST00000613405 PANK3Q9H999 370 aa16.75■□□□□ 0.27
TRAK1-210ENST00000613405 MFAP1P55081 439 aaKnown RBP16.75■□□□□ 0.27
TRAK1-210ENST00000613405 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
TRAK1-210ENST00000613405 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
TRAK1-210ENST00000613405 PLIN1O60240 522 aa16.75■□□□□ 0.27
TRAK1-210ENST00000613405 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
TRAK1-210ENST00000613405 RSPH6AQ9H0K4 717 aa16.74■□□□□ 0.27
TRAK1-210ENST00000613405 UACAQ9BZF9 1416 aa16.74■□□□□ 0.27
TRAK1-210ENST00000613405 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
TRAK1-210ENST00000613405 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
TRAK1-210ENST00000613405 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
TRAK1-210ENST00000613405 PTMSP20962 102 aa16.73■□□□□ 0.27
TRAK1-210ENST00000613405 FAM161AQ3B820 660 aa16.73■□□□□ 0.27
TRAK1-210ENST00000613405 ARID3AQ99856 593 aa16.73■□□□□ 0.27
TRAK1-210ENST00000613405 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
TRAK1-210ENST00000613405 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
TRAK1-210ENST00000613405 KIF15Q9NS87 1388 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms